Ctenopharyngodon idella (grass carp): 127502720
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Entry
127502720 CDS
T08802
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
cide
Ctenopharyngodon idella (grass carp)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
127502720
NCBI-ProteinID:
XP_051731934
LinkDB
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Position
20:complement(10965355..11095231)
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AA seq
1209 aa
AA seq
DB search
MSIPCSILGMNDVAWQETRGGMLHTNGAPETGGVRVHAGGSLATVGGAGQGPGGAHPLPG
MDRVANPNPGTPQPPLSGRSQDDATVGYFFQRQPGEQLGGCTASKHRWPTGDGNHVDQVR
AVDEMNYDFQALALESRGMGELLPAKKLWESDELAKDGRKGMLLGEEWRENAWGSSHHSV
SQPIMVQRRPGQGYNGNGDVSSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYG
GADADPDGREKTDSKEKASPFEEDKSPEMKVGDEGDASKANARGLLNGMDRDCKDFNPTP
GSRQASPTEAVERLGPSQAGLEMMVQHHPHTLQPPNSVTNKPPTEDFQSQEAQSMGSMEQ
QVGMESLQFDYAGNQIQVDSSGAPVSLFDYNSQQQLFQRSSHLTVQQLTAAQQQQYALAA
AQQQHLGLAPAFVPNPYIINAAPPGTDPYTAAGLAAAATLAGPAVVPPQYYGVPWGVYPA
NLFQQPTAAAASHSANQQASNQGPGPGQQVMRAGTNQRPLTPGQSQQSQQESLAAAAANP
ALAFTGMPGYQVLAPAAYYDQTGALVMGPGARTGLGGPVRLVQTPLLINPAAAQAAASAS
GSGNSMSGPANGLYRSMACQQPQQPQPQQQPPPPSSGLPSNSFYGSGSVAPSSQSSSLFS
HTSAAPPPSTSLGFSSTGGSLGVGLGSALGAFGSSVSNSTSSSATRRDSLLASSDLYKRG
GSSLTPIGQSFYNSLGYSSSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLHLGGLPNGSGR
YISAAPGAEAKYRSSGSTSSLFSSSSQLFPPPRARYSRSDVMPSGRSRLLEDFRNNRFPN
LQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDVFGNYVIQ
KFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIVRELDGHV
LKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRILEHCTQEQ
TLPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSSDALFKDQYGNYVIQHVLEHGRPED
KSKIVAEVRGKVLALSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHSALYTMMK
DQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMKSGSDLGP
IGGPTNGLM
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgagcattccatgcagcatcttaggtatgaatgacgtggcctggcaggagacgcgaggt
gggatgctgcacacaaatggtgcgccagagaccggaggagtcagagtccatgcggggggt
tctctagccacagtaggaggtgctgggcagggacctggaggagctcaccctctgccaggt
atggaccgggtggccaatcccaaccccggcacccctcagcctccattaagcggtcgttcc
caagatgatgctactgtgggctatttctttcaaagacagcctggagagcagttgggcggg
tgcactgcaagcaaacaccgctggcccactggtgatggaaaccatgttgaccaggtgcgt
gctgtggatgagatgaattatgactttcaagccttggctctggagtctcgtggaatgggt
gagctacttcctgctaaaaaattgtgggaatcggatgaattggcaaaagatggacgtaaa
gggatgttgctgggtgaagaatggagagagaatgcctggggttcttcccatcattctgtg
tctcagcccattatggtgcaaaggcgaccaggccaggggtacaacgggaatggagacgtg
agctcagtgctgtcaccacgctcagaggggggtggtctgggtgtgagtatggtggagtat
gtcctcagctcttctcctggagacaagatggatgggcgttacagaaatggaggctatggt
ggagcagatgcagatccagatggcagggaaaagacagattcaaaagaaaaggcttcacca
tttgaggaagacaaaagtcctgagatgaaagtaggagatgaaggcgatgcctcaaaagca
aatgccagaggattgctgaatgggatggaccgcgactgtaaagacttcaaccccacccca
ggtagtcgccaggcatctcccactgaggcagtagaacgactgggccccagtcaggctggt
ctggaaatgatggtccagcaccacccgcacactctgcagccacccaactcagtcacaaac
aaacctcccactgaggacttccagagccaggaagcccagagcatgggcagcatggagcag
caggtgggcatggagtcactccaatttgactatgctggaaatcagatccaggtggactca
tctggtgctccagtcagcctgtttgactacaactcccaacagcagttgttccagagatct
agtcatctcacagttcagcagctgactgcagcacagcagcaacagtacgcccttgctgca
gcccaacagcaacatcttggccttgcacctgcgtttgtgccaaacccttacattatcaat
gctgcccctcctggaacagacccttacaccgctgcaggattggcagcagccgcaacactt
gcaggtccagctgtagtccctcctcagtactatggagtcccgtggggggtgtatccagcc
aacctcttccaacaaccaactgcagctgctgctagtcattctgccaaccagcaggcgtct
aatcagggtccaggaccaggacaacaggtgatgcgtgcggggaccaatcagcgtcctttg
acccctgggcagagccaacagagtcagcaggagtcccttgctgcagctgccgcaaaccca
gccctggcctttacaggcatgccaggttaccaagttctagcaccggctgcttactatgat
cagactggagctctggtaatgggtcctggagctcgcactggcctgggtggacctgtccga
ctggtccaaacccctctccttatcaacccagcagccgcacaagctgctgcatctgcgtca
ggctctggtaacagcatgtctggtcctgctaacggtctgtaccggtccatggcctgccaa
caaccccagcagcctcaacctcagcagcagccgcctccaccctccagcggactgccctcc
aactccttctatggatctggctcagtggcgcccagctcccagagcagctcgttattctcc
catacaagcgcggcacctccacctagcacatctctgggtttcagcagcactggtggatct
ctgggtgttgggcttggctctgcccttggtgcctttggctcttcagtgtcaaattccact
agcagcagcgcaactcgtcgggactcccttttggccagctctgacctgtataagcgtggt
ggtagcagcttgactcccattggccagtctttctacaacagcttaggatactcctcctcc
cccagccccattggactgacacctggccactcacctttgacacctccaccctctctgccc
tcctcccacgggtcctcatccagcctccatctgggtggtctgcccaatggcagcggccga
tatatttctgctgctcccggagcagaagccaaatacaggagctcgggcagtacctccagt
cttttcagctctagcagtcagctctttcccccaccacgagcccgctacagccgctcagat
gtcatgccttcaggacgcagccgcttactagaggacttccggaataaccgctttcccaac
ctgcaactgcgagacctgcctggacacatggtggagttctctcaagaccagcatggatcc
aggtttattcagcagaagttggagcgtgcaactcctgcagagaggcagatggtgtttggg
gagatcttacaggctgcttaccaactcatgactgatgtttttgggaactacgttatacag
aagttctttgagtttggcagtgccgatcagaaactggctctggcgactcgtatccgtggc
catgtgttgccgctggctctgcagatgtacggttgtcgtgtgatccaaaaagctctggag
tccatctcatccgaccagcaggtaattagtgacatcgtacgggagttggatggccatgtg
ctgaagtgtgtgaaggatcagaacggaaatcatgtggtgcagaaatgtattgagtgtgtc
caaccccaagctcttcagttcatcattgatgccttccagggccaggtgtttgttttgtcc
actcatccgtatggctgtcgggtgatccagcgtatcctggagcactgtacccaggagcag
actctgcccatcctggaagaactccaccagcactctgagcagctgggacagaagtatcaa
ggcgtttcattggagatgacccccaaaacatattatacagtgtccagcgatgcactgttc
aaggatcagtacggtaactatgtgatccagcatgttttggagcatgggcgtccagaggac
aagagcaagatagtggcggaggtcagagggaaggtcctggctctgagtcagcataaattt
gcaagtaatgttgtagagaagtgtgtgattcattcgtcccgtgcagagagggccctgctc
atcgatgaagtctgctgtcaaaaggatggccctcacagcgccctctacaccatgatgaag
gaccagtatgcaaattatgtggtgcaaaggatgattgacatggctgagcccgcccagcgc
aagatcatcatgcacaagattcggccccatattgccactctccgtaaatacacatatgga
aaacacatcctggctaagctggagaagtactacatgaagagtggatcagacctaggcccc
attgggggccccaccaatggcctaatgtag
DBGET
integrated database retrieval system