Ctenopharyngodon idella (grass carp): 127502731
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Entry
127502731 CDS
T08802
Name
(RefSeq) SNW domain-containing protein 1
KO
K06063
SNW domain-containing protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127502731
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127502731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127502731
Spliceosome [BR:
cide03041
]
Complex B
Other components
Prp19-related factors
127502731
Complex C
127502731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SKIP_SNW
Motif
Other DBs
NCBI-GeneID:
127502731
NCBI-ProteinID:
XP_051731978
LinkDB
All DBs
Position
20:complement(10051706..10065707)
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AA seq
536 aa
AA seq
DB search
MSLASFLPAPTQLSQDQLEAEERSRVQRSQSTALVSTRREPPPYGFRKSWVPRALEDFGD
GGAFPEIHVAQYPLEMGRKKRTSNALAVQVDAEGKIKYDAIARQGQNKDKVIFSKYTDML
PKEVLNEDAPELQKPDEEAVKEITEKTRAALEKQVSQKIAAAMPVRAADKQAPAQYIRYT
PSQQGLAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVEKKMAQKEKEKKEEKLRELAKMARDRRAGIKAHGDKGGEDTEVRERDEIRHE
RRKERQHDRNISRAAPDKRSKLQRDQDRDISELIALGQPNPRTSSEAQYDQRLFNQSKGM
DSGFAGGEDEMYNVYDQPFRSGRDMAQNIYRPGKSADKDMYGDDLDTLMQSSRFVPDREF
SGADHGPRRDGPVQFEEDPFGLDKFLEEAKQHGGSKRASTSGRSKDYDHEKKRRKE
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctggcaagttttctccctgcacccacccaactgtcccaggaccaactggaggca
gaggagaggtctcgtgttcagaggtcgcaatccactgctttggtctccacccgcagagaa
cctcctccctacggcttcagaaaatcatgggtgccccgggcactagaggattttggagat
ggaggagcttttccagagatccatgtggcccagtatcctctggaaatgggtaggaagaaa
aggacctccaatgctctcgcagtgcaagtggatgcagagggcaagatcaaatatgacgcc
attgctaggcaaggtcaaaacaaagacaaggtcatattcagtaaatacacagacatgctt
cctaaggaagtactaaacgaagatgctcctgagctgcagaaacctgatgaagaggcagtg
aaagagattacagaaaagaccagagcagctctggagaaacaggtatcgcagaaaattgca
gcggccatgcctgtacgtgctgcagacaaacaggccccagcacagtatattcggtacaca
ccctcccagcaaggacttgcgtttaactctggagcaaaacagagagtcatccgtatggtg
gaaatgcagaaagatccaatggaaccaccacgattcaaaatcaataagaaaattcctcgt
ggacctccatcccctcctgctccagtcatgcactctccaagcagaaagatgacagtgaaa
gaacagcaggagtggaagattccaccctgtatttccaactggaagaacgcaaagggttac
accattcctctggacaagcgtttggctgctgacggacgaggcctgcagactgtccacatc
aatgagaactttgccaagctggctgaggctttgtacattgcagacagaaaggccagagag
gctgtggagatgagagctcaagtggaaaagaagatggcccagaaagagaaagaaaagaaa
gaggagaagctgagagagttggctaagatggccagagaccgcagagctggtatcaaagcc
catggtgacaaaggtggtgaggacacagaagtcagggagcgtgacgagatccgtcacgag
aggaggaaagaaaggcagcatgacaggaacatctccagagccgcccctgataagaggtcg
aagctacaaagagatcaggacagggacatcagtgagctcattgccctgggtcaaccaaac
ccccgtacttccagtgaggctcagtatgaccagagactcttcaatcagagcaaggggatg
gacagtggttttgccggtggagaggatgagatgtataatgtgtatgatcagcccttcaga
agtggcagagacatggcacagaatatttacaggcctggtaagagtgcggataaggacatg
tatggagacgacctggacaccctcatgcagagcagcaggtttgttcctgatcgagagttc
tcaggtgctgaccacggcccccgccgtgacgggcctgtgcagtttgaggaggatcctttc
ggtctggataagttcttggaggaagccaagcagcacggaggctctaaaagggcatccact
agtgggcgttcaaaagactacgaccacgagaagaaacgcaggaaggagtga
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