Ctenopharyngodon idella (grass carp): 127502934
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Entry
127502934 CDS
T08802
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Ub isoform X1
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127502934
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127502934
Spliceosome [BR:
cide03041
]
Common components
Common spliceosomal components
hnRNP proteins
127502934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
SAP_new25
Zeta_toxin
ATPase_2
AAA_18
Motif
Other DBs
NCBI-GeneID:
127502934
NCBI-ProteinID:
XP_051732375
LinkDB
All DBs
Position
20:23058676..23066601
Genome browser
AA seq
796 aa
AA seq
DB search
MSEINVKKLKVNELKDELKKRQLSDKGLKAELMERLQAALDAEAQAEEAEAVAAEAPKEN
EADGNGVAVEQECIGEEEPEGESMEAEEQNGDGGDAAVLGDGQDDEMGEEEEDGDAGVEM
DKAFDEDEEEEDDDDEIIDKIDDEDGEPESHPLEGDADKDISADQKNKKGVKRRREEHGR
GYFEFIEESKYSRAKSPLPPLEEEDEEFDDTLVCLDPYNCDLHFKVSRDRYSASSLTMES
FAYLWAGGRASYGVNKGKACFEMKITEKIPVKHLNSKNMDFHDVHIGWSLSNGSLLLGEE
EHSYSYSGKAKKTSNCVTEDYGESFDENDVIGCFINFEADEVEISYSKNGKDLGVAFKIN
KESLAEQTLFPHVLCHNCAVEFNFGQNETPFFPQVEGFTFLQQIPADVRIRGPKGPETKK
DCEVIVMVGLPGSGKTAWVKKHVEENPGKFNILSTNTILEKMMIGSMKRQNKDTTKLSAI
SQRAPLFLGKFIEIAARKKRNYILDQTNVSAPAQRRKMCLFAGFQRKAVVIFPTDEALKE
RAQKKAETDGKDVPEHAVLKMKGIYTLPEVGDCFSEVTYVELQKEEAVKLLEQYKEESKN
ALPPEKKANQGTLTPRKGGGRGKGPKNQFSRGGGPGPRGGRGGFQPRGNFRGLPVPPRVG
GFNRHPRGYMPPPPPPPVYRGGFHSRGNFSRGGAGGMPSRGMAPRGGHMRGGHMRGSRGG
AMSRGGPANRGNMHRGGGPNHRGQFQQKFRGRGGHQQNRGGFGNKNGSFAQAFNQSWQQG
FWNQKPWNQQYHPGYY
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaatcaacgtaaaaaagcttaaggtgaacgagttgaaggacgagctgaagaag
cgtcagctttccgacaagggattgaaggccgagcttatggagcggctgcaggccgcgctc
gatgcagaggcccaggccgaagaggcagaagctgtcgctgcagaagcaccaaaagaaaac
gaggccgatggaaacggtgttgcagtcgaacaagaatgcataggtgaagaagagccagag
ggcgagagcatggaggccgaggagcaaaatggagacggtggtgatgctgctgttttaggt
gatggccaggacgacgaaatgggcgaagaggaggaggatggggacgccggcgtggaaatg
gacaaagcctttgatgaagatgaagaggaggaggacgacgacgacgagatcattgacaaa
atcgacgatgaagacggtgagcctgaatctcatccattagagggggatgcggacaaagac
atcagtgctgatcagaagaataagaagggtgttaagagacgccgagaggaacatggaagg
ggctactttgaatttattgaagaaagcaaatacagccgggccaagtctcccttgccacct
ctggaggaagaggatgaagagtttgacgacacactggtctgcctggatccctacaattgc
gaccttcatttcaaagtctcccgagaccgatacagcgcctcctcccttaccatggagagt
tttgcttacctttgggcaggtggccgtgcctcctatggtgtaaacaagggtaaagcctgc
tttgaaatgaagatcactgagaaaatcccagtcaagcatttaaacagcaaaaacatggac
ttccatgatgtccatattggctggtccctgtctaatggaagtcttttgctgggtgaggag
gagcattcctactcctattcaggcaaagcgaagaagacttcaaactgtgtgactgaagac
tacggggagagttttgatgaaaatgacgtcattggctgcttcattaattttgaagcagat
gaagtggagatttcatattccaaaaatggcaaggatcttggtgtggctttcaaaatcaat
aaggagtccttggctgaacaaactctgttcccccatgttctttgccacaactgtgctgtt
gagttcaatttcggccagaacgagacaccattcttccctcaggtggagggtttcaccttc
ctgcagcaaattcctgctgatgtgcgtatcagaggacctaagggacctgagaccaagaaa
gattgcgaggtgatcgttatggttggccttcctggatctggaaaaactgcttgggtaaag
aaacatgttgaagagaaccctgggaagttcaacatcctcagcaccaacaccatcttggag
aagatgatgattggcagcatgaagaggcaaaacaaagacacaacaaagctctcagccatt
tctcagcgtgctcccttgttcctgggcaagtttattgaaattgcagcccgcaaaaagaga
aactatatattggatcagacgaatgtctctgcaccggcccagagaaggaagatgtgtctg
tttgctggctttcaacgcaaagctgtagtgatcttccccacagatgaggcccttaaggag
agagctcagaagaaagcggaaaccgatggcaaagatgtacccgaacatgccgttctaaaa
atgaaagggatctacacattgccagaggttggagactgcttctcagaggtcacctatgtg
gaactgcagaaggaggaggccgtcaagctcttggagcagtacaaggaagagagtaagaat
gctttgccaccagagaagaaggccaaccagggtaccttgacccccagaaagggaggcgga
cgaggcaaagggcctaagaaccagttcagtagaggtggtggtccaggcccacgtggaggc
agaggtggattccagccccgtggaaacttcagagggctaccagtaccacctcgtgttggt
ggttttaaccgccacccacgtggctacatgccaccaccaccaccaccacctgtctaccga
ggagggttccacagccgaggcaacttcagcagaggtggagccggtgggatgcccagccgg
ggaatggctcccaggggtggccacatgaggggagggcacatgaggggcagcagaggtgga
gcaatgagccgtggagggcctgcaaacagaggtaacatgcaccgcggcggtggacccaac
cacagaggacaatttcagcagaaattccgcggtagaggaggccaccagcagaatcgtggt
ggttttggcaacaaaaacgggtctttcgcccaagccttcaaccagagttggcaacaaggg
ttctggaaccagaagccatggaatcaacagtaccacccaggatattactaa
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