Ctenopharyngodon idella (grass carp): 127502969
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Entry
127502969 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: interferon regulatory factor 4
KO
K09445
interferon regulatory factor 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127502969
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127502969
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
IRF
IRF-3
Motif
Other DBs
NCBI-GeneID:
127502969
NCBI-ProteinID:
XP_051732430
LinkDB
All DBs
Position
20
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AA seq
430 aa
AA seq
DB search
MCSDEERAMTGSSGNGKLRQWLIEQVDTGKYPGLVWENEEKSIFRIPWKHAGKQDYNREE
DAALFKAWALFKGKYREGIDKPDPPTWKTRLRCALNKSNDFEELVERSQLDISDPYKVYR
IVPEGSKKGSRSLDDSQSNSNSPSYPIHPPFAPAPSQVCNYISPAERGWRDYTTLSEIPY
SQSPYTPRWDPGYQFSGSFFSCNASDPQPSPFTLDTSMRSAEALALSDYRLNVVVFYRDA
LVREVTVNSSEGCQLGPSREGQAFASPGAPELVELPHADRASLERGVILWMAPDGLYARR
RCPCRVYWEGAHAPPTDKPNKLEREQNCKLLDTHLFITELQSYALHARPAPCSQVVLFFE
DESSDAQRPRRTFTVQVEPLFARQLLYLSHPGSMNYIRSHELSHLPSEHISPTQEYHRVI
THHHNSGSRN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcagatgaagagcgcgcgatgacggggagctccggtaacggaaagttgcgtcag
tggctgatcgagcaggtggacaccggaaaatatcctggactcgtatgggagaacgaagag
aagagcatctttcggattccgtggaagcacgcgggcaagcaggactacaacagggaggag
gatgctgcgctcttcaaggcttgggcactattcaaaggcaagtaccgggaggggatcgac
aaacctgacccaccaacttggaaaacacgtctccggtgtgctcttaacaagagcaatgac
tttgaggagcttgtggagcgcagtcaacttgacatatcggacccctataaagtgtatagg
attgttccggaaggatccaaaaaaggttccagatctcttgatgattcacagtctaattca
aactcacccagttatccaatacacccaccatttgcaccagcaccttctcaggtgtgcaac
tacatttctccagcagagagaggatggagggattacaccaccctgtctgagatcccttac
agccagagcccctacactccacgctgggaccctgggtaccagttcagtggctcattcttc
agttgcaatgcatctgatccacagccatcacccttcaccctggacaccagcatgagatcc
gctgaggctctggccctctcagattaccgcttaaatgtggtggtgttttaccgagatgcc
ctggtgcgagaggtaacagtgaatagttcagagggctgtcagctgggccctagcagagag
ggacaggccttcgcttcacccggggccccagaactggttgaactccctcatgctgacagg
gcatctctggagcgtggtgttatactctggatggcccctgacgggctctacgcccgccgc
cgctgcccctgcagggtgtactgggagggagctcacgcaccacctactgacaaacccaac
aagctggagagagagcagaactgcaaactgctggacactcatctgtttataacagagttg
cagagttacgccctgcacgctcgtccagcgccatgttcccaagtggtgctattttttgag
gatgagagttctgatgctcaaaggccaagaaggaccttcacagtgcaggttgagccactg
tttgctcgccagcttctctacctcagtcacccgggcagcatgaactacatccgcagccat
gagctttcacaccttccttctgaacacatctccccgacccaagagtaccacagagtcatt
acgcatcaccataacagcggctctcgaaattga
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