Ctenopharyngodon idella (grass carp): 127502981
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Entry
127502981 CDS
T08802
Name
(RefSeq) laminin subunit alpha-2 isoform X1
KO
K05637
laminin, alpha 1/2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127502981
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127502981
09142 Cell motility
04820 Cytoskeleton in muscle cells
127502981
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
DUF948
ApoLp-III
SH3BP5
Motif
Other DBs
NCBI-GeneID:
127502981
NCBI-ProteinID:
XP_051732439
LinkDB
All DBs
Position
20:354896..512875
Genome browser
AA seq
3211 aa
AA seq
DB search
MNTPCFLVLVALLWRCCAAQQRGLFPAVLNLASMAEIKTNATCGETGPQMYCKLVEHVPG
RPVKNPQCRTCNLRSDSDNERHPIEYAIDGTNRWWQSPSIMNGMEYHYVTVTLDLQQIFQ
IAYVILKAANSPRPGNWILERSLDGETFMPWQYYAITDTECITRFDIVPRTGPPSYTHDD
EVICTSFYSKIHPLENGEIHTSLINGRPSADDPSPTLLNFTSARYIRLQFQRIRTLNADL
MTLDLNDPKDIDPIVTRRYYYSIKDISVGGMCICYGHAKACPLNTDTKKFSCECEHNTCG
ESCDRCCPGYNQKPWMAGTFLTRHVCEKCNCHGKSEECYYNQTVADAKLSLNINGAYEGG
GVCLGCSDNTGGINCQSCIDGYYRPSGVRPDESWPCRPCLCDLRGSLHSACVPDESQATT
GLAVGSCICKQGYAGEKCDRCAFGYTGFPLCERCDCSSEGSVNQDPCQLPCVCKEHVEGR
NCDRCKQGFYHLRGDHPRGCEKCYCSGLASLCTESHWDYSNVMDMSGWFLTGADGEGLVW
AVPSRETAHQLTVSQSDAQTHLTAPYYWSAPSAYLRKKLLAYGGRLEYTLSYDTESRDDP
VRIISAPDVIIEGGGLRLIDSSSGLALYPFSTAERRIDLLPESFQHHASGLAVSKRDFHA
VLNNIERLLLRASYVQEHSAIYRLGSVSMSVADKDSRSGEQARAVEVCQCPPGYDGTSCE
MCAVGYRRVNGTLYRGVCELCQCHGHAERCDDVTGHCLGCRDHTVGPNCDRCAPGYYGDA
SRGTADDCQPCACPLLSPSNNFSPTCHVDARGGVICDRCPPGYAGTRCDRCANGYFGRPD
VLGGSCQPCMCNGNLDHTAELSCDPVTGACLRCREGYGGPDCERCADGYFGDALIAKNCQ
ACQCHSNGSVSELCHQETGQCQCRQHVVGRQCDECMPNCWWDGESQLCRPCQCSARGSVS
QRCDSEGRCICRAGYVGRRCDLIRPAHARRETRRPVQQVPIQHIQRWESRGGCPRGAYRP
GTGSGLHMQGAQGCVPCHCNSFGSKSFDCDESGQCRCQPGVTGQKCDRCAPGHFSFQEGG
CTPCQCAHVGNNCDANTGQCICPPNTVGERCDKCAPNHWGHDISSGCKACGCNALGSVAQ
QCNVNTGCCMCREQFRGEKCDECKLGYRDFPQCISCQCSTAGSSVDACDSESGLCACADR
SGQCSCKPNVEGVRCDRCKVGSFGLSHTNPLGCSQCYCFGLSSSCTEATGLIRMRLTLIP
EQTVLPLVDESNSQESTAGVSFQHPDIIANADVVQQHLSEPYYWRLPKQFKRSMITAYGG
KLRYAIYYEARDETGRTSYEPQVIIKGGPNKDKVMVRHMPALQIGQLTRHEIDITEHDWK
HKDGRKMSREDFMDVLFHVEYILIKASHGSVMRHSRISEITLEVAEVGTPSQDSEIAHQI
EKCDCPLGYAGLSCEECAAGFYRLSAHTGGAASRAGFGSCVRCQCNGHSDSCDPETAVCQ
NCQHHTVGDKCERCAAGFYGVVRGFPDDCKPCACPLLNPENNFSPTCQTEGFNDYRCTAC
PEGYEGKHCERCAPGFHGNPSVYGGRCEECKCDAYGSYPTACDSRSGQCQCRPGASGLKC
DQCMERHVCGPEGVVSCDDDCAGLLIRDMERLLRLIGSVNLTLPLPLPYKVLYRFENMTE
ELKHMLSPQRAPERLLQLADSNLGSLVTEMDELLSRATKVSADGEQTAADAERSRKGAED
LELYVRNTLLAAEALRDKARELNETLGVREGAPEKSVNEMNDEIQAMLAELRKRQLSGKK
HVADEELGAAEALLARVKRLFGDPHQATEDLKKEVGDKMGDYRQKLDEAQDLLRDAHNKT
KQAEGLAVTNQLNLDRLQGKREVAGEKKKEMEGILAEGEKMLDEANALSDSINQGKEELE
EMARDLGPLHDKLDFKVTQLGRGLDDSIPDLLLRAEDHAGQLNESAGILDSILAEAKNLS
FNATAAFNAYTNIKNYIDEADKVAKEARKTSVEALQLASGPKGSLKDQAKGSAQKSHRLW
NEAKELQNDVKENGDNLGALQLRLKEANKNKKDLQKGLNDTMEKLNAIPDDLAEKIQATK
VKAAEANDTAIDVLNRLKDMNLNLMGLKRNYSKLEDDVNKANNLIKDPEKNIHAAGAKVK
DLENEADRLLEKLKPIQELQDNLKKNISQIKELINQARKQANSIKVSVSSGGDCIRTYRP
EIKKGRYNTIILHVKTVAADNLLFYLGSAKYVDFLAIEMRKGKVNFLWDVGSGVGRVEYP
DLVINDGNWHRIEASRIGLNGSISVRALEGPKTGILPTHRSARSPESYTVLDVDQNAYLF
VGGMLGSVKKADAVKTITFSGCMGETSLDGKPIGLWNYKERDGDCAGCVVSPQPADTEGT
VQFDGEGYAAVSRPTRWNPNISTVMFKFRTFSTDAVMMYFATKDMKDFMSAELSDGKLKV
SYDLGSGTGSTISNKRYNDGKWKSFTMSRMKKEATITIVNIDTNEDEQLRMTSSGGATGL
NLREDERMYFGGLPKAGRYRSEVVLKSYSGCMKDIEVSRTPYNLLSSPDYTGLIKGCSIE
NLHTVSFPRPGYMELKPMSFDVGSEITLSFSTKNENGIILFGRGGVTSMTQGLTPVHIPR
RSRRQTGEPFLSVQLNKGALEVLVFTGSRNPRRAVRKPDKGILHDGREHSLRILRLPGAS
FSVQVDEEPLMQQALPSDHPLSIHRLFVGGIPVEIETGVQRPNVPFEGCIWNLLINTVPV
DFSQPVAFENAEIGQCPDLAPPPAPPGIPEEEEEEEEEAPPKPALPHKEADRPQPPASTT
TPPAKATPIPDTPTGPAVSCAAGAEPVVLELAKQFGLSRNSHMAFEFDDRKVKNRLIIEF
EMRTGADSGLVFYMARINHADFATIQLKEGMAHLSFDLGSGNTSVSVPRIINDGQWHKIR
VMREKQRGILTIDNRYSKHTTSPKKADILDVVGMLYVGGLPLNYTTKRIGPVLYSIDACI
KNFKMMNLPLDMEKPTSSYRVGSCFANPEKGTYFDGTGYAKAVDSYRVGNDVSVDLEFRT
AQSSGVLLGVSSQKMDGLGIELANGKLLFHADNGVGRVTAVYEPGQEAGLCDGQWHSVSA
HKLKHRLELIVDGRKSEAASPDVRSASADTNDPVYVGGYPEGLKQFGLTINTPFKGCMRN
LKITKAGKTLEVQMNKVQELRGVQPLTCPAS
NT seq
9636 nt
NT seq
+upstream
nt +downstream
nt
atgaacacgccgtgttttctcgtgctcgtcgcgctgctgtggcggtgttgtgcagctcag
cagagaggtctcttcccagctgtgctgaacctggcctccatggcagagatcaagaccaac
gccacgtgtggagaaacaggaccacaaatgtactgcaaactagtggagcacgtaccagga
cggcccgtgaaaaaccctcagtgtaggacctgcaacctgaggagtgattctgataatgag
cggcatcccatcgagtacgctatcgacggcaccaacagatggtggcagagcccgagcatc
atgaacgggatggaataccattacgtcactgtgactctggacctgcagcagatcttccag
atcgcttatgtgatcctgaaggctgcaaactcgcctcggcctggaaactggattctggaa
cgttctctggacggtgaaacattcatgccgtggcagtattacgctataacagacacagag
tgcatcacacgcttcgacatcgtccccagaacaggcccgccgtcctacacgcatgatgat
gaggtcatctgtacctccttctactctaaaatccatcctctggagaacggcgagattcac
acctcactaataaacggtcgtcccagcgcggacgatccgtcacccacgttactcaacttc
acctcggcacgttatatccgcctgcagttccagaggatccgcaccctaaatgctgacctc
atgaccctcgacctcaatgaccccaaagacatcgaccccatcgtcaccagacggtattac
tactccattaaggatatatcagtaggaggcatgtgcatctgttacggtcacgctaaggcc
tgccctctcaacacagacaccaagaaattcagctgtgagtgtgaacacaacacttgtggg
gagagctgtgaccgctgttgccctggttacaaccagaaaccctggatggcgggaaccttc
ctcacgcgccacgtctgtgaaaagtgtaactgtcacggtaaatcagaggaatgctattac
aaccaaactgtggccgatgctaagctgagtttgaatattaatggagcgtatgaggggggc
ggagtctgccttggttgctctgacaacactggaggaattaactgtcaatcatgtatagac
ggatactacagaccaagtggggtgagaccagatgagagctggccctgcagaccctgctta
tgtgacctgagaggttcactccactctgcatgtgttccagatgagagtcaggccaccaca
ggtttggctgtgggctcgtgcatctgtaagcagggctacgcaggtgagaagtgtgacagg
tgtgcgttcggatacacagggttccctctgtgtgagcggtgcgactgcagcagtgagggc
agcgttaaccaggatccctgccagctgccctgtgtgtgtaaggagcatgtggagggacgg
aactgtgaccgctgtaaacagggattctatcatctccgtggagaccatccccgtggatgc
gagaagtgctactgttctgggctggccagcctgtgtactgaatcccactgggactacagt
aatgtgatggatatgtctggatggtttctgacaggagcggatggggaggggctcgtgtgg
gcggtgccaagcagagagacggcccatcagctcaccgtgagccaatcagatgctcagact
cacctgacagcaccctactactggagcgccccgtctgcgtatctgcgcaagaaactcttg
gcgtacggaggcaggctggagtatacgctctcttatgacaccgagagcagagacgacccg
gttcgcatcatcagcgctcctgatgtcatcatagagggcggtgggctgagattgattgac
agcagctccgggctcgcgctgtatccgttctccacagccgagcgcaggatagatctgctg
ccggaaagctttcagcatcacgcctcaggactggccgtcagtaagagagacttccacgcc
gtcctcaacaacattgagcgtctgctcctccgggcctcctacgttcaggaacacagcgcc
atctacaggttgggcagcgtgagcatgagtgtggcggacaaagactctcgcagcggtgaa
caggctcgtgctgtggaggtgtgccagtgtccgcctggatatgatggaacttcctgtgag
atgtgtgcggtgggataccgcagggtgaacgggacgctgtatcgcggcgtgtgtgagctc
tgtcaatgccacggacacgcggagcgctgcgatgacgtcactggacactgcctgggctgt
agggatcacaccgtaggaccgaactgtgaccgatgtgctcctggctactacggagacgcc
tccagaggaactgcagatgactgtcagccgtgtgcctgtcctcttctgagcccgtcaaac
aatttcagtcccacgtgccacgtcgatgccagaggtggggtgatctgcgatcgatgcccg
ccgggttacgccggaacacgctgtgacaggtgtgctaatggatatttcgggcgtccggac
gttcttgggggttcctgtcagccgtgtatgtgtaacggtaacctggaccatacagcagag
ctcagctgcgaccctgtgaccggagcctgtctgcgctgtcgtgagggatacggagggccg
gactgtgaaagatgtgcagatggatactttggagatgccctcatagccaagaactgccaa
gcgtgtcaatgtcacagtaacgggtcggtgtcggagctgtgccatcaggagaccgggcag
tgccagtgtcgacaacatgtggtcggacggcagtgtgacgagtgtatgccgaattgttgg
tgggatggtgagtctcagttgtgtcggccgtgtcagtgcagcgctcggggctctgtgtcc
cagcgctgtgactctgagggcaggtgcatctgtcgggccggatacgtgggccgcaggtgt
gacctgatacggccggctcacgcccgcagggagacccggagacccgtccaacaggttccc
atccaacacatccagagatgggaaagcagagggggctgccctcgaggggcataccgcccc
ggcacagggtctggtttacacatgcagggcgctcagggctgtgtcccgtgccactgcaat
tcattcggatcgaagtcgtttgattgtgacgagagcggtcagtgtcgctgtcagcccggt
gtgacgggacagaagtgtgaccgctgcgctcccggacacttcagcttccaggaaggcggc
tgtacaccgtgccagtgtgcccatgtgggaaataactgtgacgctaacacaggtcagtgt
atctgtccgcccaacaccgtgggagagagatgtgacaaatgtgcgccaaaccactggggt
cacgacatcagcagcggctgtaaggcatgcggctgtaacgcattggggtccgtggcgcag
cagtgtaatgtgaacacgggctgctgcatgtgccgtgagcagttcaggggcgagaagtgt
gacgagtgtaagctgggttacagagacttcccacaatgcatttcttgccagtgctccaca
gcaggctcatcagtggacgcctgcgattcagaatctggcctctgcgcatgtgcagacaga
agtgggcagtgctcttgcaagcctaatgtggagggagtgaggtgtgaccgctgtaaggtg
ggctcgttcggcctcagtcacacgaatcctctgggctgcagtcagtgctactgcttcggc
ttgagcagctcgtgtacagaggccactggactcatccgtatgaggctgactctgatacca
gaacagaccgttcttcctctcgtggacgaatccaacagtcaggagagcacagcgggcgtg
agcttccagcatccggacatcatcgccaacgctgatgtggtccagcagcacctgagcgag
ccgtactactggagactgcccaaacagttcaaacgctccatgataacagcctatggcggg
aagttacggtatgccatctattacgaggctcgtgatgagacgggccgcacctcttatgag
ccccaggtcatcataaagggcggccccaacaaggacaaggtcatggtccgccacatgcca
gcgcttcagattggccagctgacccgtcacgagattgacataacagagcatgactggaaa
cacaaggacggcaggaagatgtctcgtgaggatttcatggacgtgctgtttcatgttgaa
tatatcctaataaaggcctcacacggcagcgtcatgagacacagcagaatctctgagatc
actctggaggtggctgaggtggggacgccatcacaggacagtgaaatcgcccatcagatt
gagaaatgtgactgtcctctgggatacgccggcctctcctgtgaggaatgtgcggccggg
ttctacaggctctctgctcacaccggtggtgctgcgtccagagccggctttggcagctgt
gttcggtgccagtgcaatggacacagtgactcgtgtgatcctgaaacagccgtctgccag
aattgtcagcatcacacagtaggagacaagtgtgagcgatgtgctgcagggttttatggc
gtagtgcgcggctttcctgatgactgcaaaccctgtgcgtgtcccctgctcaaccctgag
aacaacttcagtcccacctgtcagacggagggttttaatgactaccgctgcactgcctgt
cccgaaggctacgagggaaaacactgtgaaaggtgcgcccctggtttccatggtaacccg
agtgtgtatggcggccggtgcgaggagtgtaagtgtgatgcgtacggatcatatcccaca
gcgtgtgactcgcgctccggacagtgccagtgccgtcccggcgccagcggactgaagtgt
gaccagtgcatggagaggcatgtgtgtggccccgagggcgtcgtgtcgtgtgacgatgac
tgcgctgggctcttgattcgtgacatggagcgtctgctgcgtttgattggcagtgtcaat
ctcactctgcccctccccctgccatataaagtgctctatcgattcgagaacatgacggag
gagctgaagcacatgctttccccacagagagctccagagagactgctgcagctggccgac
agtaacctgggcagtctggtcactgaaatggacgaactgctcagtcgggcgactaaagtg
tctgctgatggagagcagacggcagctgacgctgagaggagccgcaaaggagccgaggac
ctggagctttacgttaggaacacactcctggctgctgaagctctacgagacaaagcacgt
gagctgaacgagactctgggcgtgagggagggggctccagagaagagtgtgaatgagatg
aatgacgaaatccaggccatgctcgcagaactacgcaaacgacagctctccggcaagaaa
cacgtcgctgacgaagaactgggggccgcagaggctcttttggctcgagtgaagcgtttg
tttggagatccacaccaggccacagaggacctgaagaaggaggtgggtgataagatgggt
gattacaggcagaaactggacgaagctcaggatctgctgagggacgcgcacaacaaaacc
aaacaggcagaaggtctggctgtcaccaaccaacttaacctcgaccgcctgcaggggaag
agggaggtggccggtgaaaagaaaaaggagatggaggggattttggcggaaggagagaag
atgctggatgaagctaacgctctatcagacagcatcaaccagggcaaagaggagctggag
gagatggcgagagacctgggacctctgcatgataagctggattttaaggtgacgcagttg
ggtcgcggtctggacgactccatcccggatctgctgctgagagcggaggatcacgccggc
cagctcaacgagtccgctggcatactcgacagtattctagctgaggcaaagaacctgtcc
ttcaacgccaccgctgctttcaacgcatacaccaacatcaagaactacatcgatgaggct
gataaggtggccaaagaggcgaggaaaaccagcgttgaggctctacagctggcctcagga
cccaaaggatctctgaaagatcaagccaagggctcggctcagaagagccaccgcctgtgg
aacgaggccaaagaactgcagaacgacgtgaaagaaaatggagacaatctgggtgctctt
cagctcagactgaaagaagccaacaaaaacaaaaaagacttacagaaaggcctgaacgac
acaatggagaaactcaacgccatccctgatgatctggcagagaagatccaggccactaag
gtgaaggcggcagaggccaacgacacggccatagacgtcctcaaccgcctgaaggacatg
aacctgaacctgatgggcttgaagaggaactacagcaaactggaggacgacgtcaacaaa
gccaacaacctcatcaaggaccccgagaaaaacattcatgcggcaggtgctaaagtgaag
gatctggagaatgaggctgacaggttgctggagaaactaaagcccattcaggaactccag
gacaatctgaagaaaaacatctcgcagatcaaagaactcatcaaccaggctcgcaaacag
gccaactctattaaggtgtctgtgtcgtccggcggagactgtatccgcacttatcggcca
gagatcaagaagggccgctataacaccattatcctccatgtgaagaccgttgctgctgat
aacctgctcttctacctcggatcggccaaatatgtggatttcttggcgattgagatgagg
aagggtaaggtgaacttcctgtgggatgttgggtcaggggtcggccgtgtagaatatcct
gatctcgtcatcaacgatggaaactggcatcgaatcgaagcctcacgtatcgggctgaac
ggcagtatctccgtccgtgcgctggagggacccaaaactggcatcttaccaacccacaga
agtgccagatcacccgagagctacactgtgctggatgtggaccagaacgcttacctgttc
gtcggtggcatgctgggctcggtgaagaaggcagatgctgtgaaaaccatcacgttctca
ggctgtatgggagagacgtctctggatggaaaacccatcggtctgtggaactacaaagag
agagacggggattgtgctggttgtgtagtcagtcctcagccggcagacactgaaggcacg
gttcagtttgacggagagggttatgcagccgtcagtcgccccaccagatggaaccccaac
atttccacagtgatgttcaagttccgcacgttctccacagacgcagtcatgatgtacttt
gccacaaaagacatgaaagacttcatgagtgcagaactgagtgacgggaagctgaaagtg
agttatgatctgggctcaggcaccggctccaccatcagtaacaaacgctataatgacgga
aagtggaagtccttcaccatgtcccgcatgaagaaagaagcaaccatcaccatagtgaac
attgacactaatgaggatgagcagttgcggatgacgtcttcaggtggcgctacaggactc
aacctcagggaggatgagaggatgtattttggaggtttacccaaggctggaagatacagg
tcagaggtggttttgaagagctactctggctgtatgaaagacattgaagtttcccgaacg
ccgtacaatctgctgagcagcccagactacacaggactgatcaagggctgctccattgag
aacctccacaccgtgagcttcccgaggcccggctacatggagctgaagccgatgtcgttt
gacgtgggctccgagatcacgctctccttcagcaccaaaaatgagaacggcatcatcctg
ttcggcagaggaggagtgacgtccatgacgcagggcctgacgcccgtccacatcccccgc
cgctcacgcagacagaccggagagcccttcctgtctgtgcagctgaataaaggagctctg
gaggtgctggtgttcacaggcagcaggaatccacgcagagctgtcagaaaacccgacaag
ggaatcctgcatgatgggagagagcattcgctgcgcatcctgagactcccgggagcatct
ttctctgtgcaggtggatgaggagccgctcatgcagcaggcattacccagcgatcaccct
ctaagcatccatcggctcttcgtcggcgggatcccggttgagatagaaacaggcgtacag
cgccccaacgtgccgtttgagggctgcatctggaaccttctcatcaacaccgtcccggtg
gatttctctcagcccgtggcctttgagaacgcagagattggtcagtgccctgacctggcc
ccgcctccagccccgcccgggatccctgaagaggaggaggaggaagaggaagaggctccg
cccaaaccagcgctgccgcataaagaagcagatcgacctcaaccaccagcctccactacc
acgccccccgccaaggccacgcccatcccagacacgcccaccgggcccgcggtgtcgtgc
gcagcaggggcggagcctgttgtcctggaactggccaaacagtttggtctgtccagaaac
agtcacatggccttcgagtttgatgacagaaaggtgaagaacaggctgatcatcgagttc
gagatgcgcaccggagcagactctgggctggtgttctacatggccagaataaaccacgcc
gacttcgccaccatccagctgaaggagggaatggctcacctgagcttcgatctgggcagc
ggaaacacctccgtcagcgtgccgcgcatcatcaacgacgggcagtggcacaagatccgt
gtgatgagagagaagcagagagggattctcacgatcgacaaccgctactccaaacacacc
accagcccgaagaaagctgatattctggatgtggtggggatgttgtatgtgggtggttta
ccgctcaactacaccaccaaacgcatcggacccgtgttgtacagtattgatgcttgcatt
aagaacttcaagatgatgaatctgcccttggacatggagaaacccacgtccagctatcgc
gtgggctcctgtttcgccaacccagagaaaggaacttattttgatggcacgggttacgcc
aaagctgtggactcgtatcgagtgggaaatgacgtgtctgtggatctggagttcaggacg
gcacagagcagcggcgttctgttaggcgtcagcagccagaagatggacggactgggcatc
gaactcgccaatggaaagcttttgttccatgctgataatggagtgggacgcgtcacagcc
gtgtacgagcccgggcaggaggcggggctttgtgacggacagtggcactctgtctccgcc
cacaagctgaagcaccgtctggagctcatcgtggacggcaggaagtccgaggcagcgagt
ccagatgtgcgctctgcctccgccgataccaatgaccctgtgtatgtgggcggataccct
gagggtctgaagcagttcggactcactataaacacaccgtttaaaggctgcatgaggaac
ctgaagatcactaaagctgggaaaactctggaggttcagatgaacaaagtccaggagctc
agaggagttcaaccgctcacctgccctgctagttaa
DBGET
integrated database retrieval system
