Ctenopharyngodon idella (grass carp): 127503022
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Entry
127503022 CDS
T08802
Name
(RefSeq) interferon regulatory factor 4a
KO
K09445
interferon regulatory factor 4
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127503022
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
127503022
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
127503022
NCBI-ProteinID:
XP_051732525
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All DBs
Position
2:31019727..31034324
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AA seq
461 aa
AA seq
DB search
MNLDGDCSMSVSCGNGKLRQWLIDQIDSGEYPGLVWENDEKTIFRIPWKHAGKQDYNRDE
DAALFKAWALFKGKYREGLDKPDPPTWKTRLRCALNKSNDFDELVERSQLDISDPYKVYR
IIPEGAKRGSKASSMEDNTTHVTPISYPMHSPYPPLQPQMPGYMHPQERRDWREYSSDQP
HAQTPHAELPYGQCPYPPTRSLPWHASPCDNGYQISGSFYTYSPTETHPVAMDPNMRSAE
AMAISDCRLHVSLYYRESLVKEVTTNSPEGCRISSSPSPGSPSSPSSPCPEERLYGGAEP
VLFPFPYPQSQRRGAEKLPNILERGVLLWLAPDGLYAKRLCQGRVYWEGPLAPYADKPNK
LEKEQTCKLMDTQQFLSELQGFIHHGRPMPRSQVVLCFGDEFPDPQRQSKMITAQVEPMF
ARQLLYFAGQTNGHYLRGYELQSQGALPVEEYQRSIQHLQE
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagatggggactgcagcatgtcagtcagttgtgggaatggcaaacttagacag
tggctcatcgatcagattgacagcggggagtatcccggcttggtttgggaaaatgacgag
aaaaccattttcaggattccctggaaacacgcggggaaacaggactacaaccgcgatgag
gacgcggcgctcttcaaggcttgggccctgttcaaaggcaaatacagggaaggcttggac
aaaccagaccctccaacgtggaagacgagactccgctgtgccctgaacaaaagtaatgac
ttcgatgaactggtggagcgaagccagttggacatatcggatccttacaaggtctacagg
ataattccagaaggagcaaagagaggctctaaggccagtagtatggaggacaacacaacg
catgtgactcctattagttatcccatgcattctccttatccacctctacagcctcagatg
ccgggatatatgcacccccaggagagacgtgattggagagaatatagttcagaccagcct
catgcccaaacgcctcatgcggagttaccatacggccagtgtccgtatccaccaacgcgc
tctttaccctggcatgcatcgccctgtgacaacggataccagatatctggctccttctac
acctactcacctacagaaacccatccagtggcaatggaccccaatatgagatccgctgaa
gccatggccatttcagactgtcgtctgcacgtctccctgtactaccgtgagtcacttgtt
aaggaagtcaccaccaacagccctgaaggctgtcgaatctcctcctctccgtccccggga
tccccttcatccccttcttctccttgcccagaggaaaggctctatggtggggcagagccc
gtgctctttcccttcccatacccccagtcccagcggcgtggggctgagaagctgcccaac
atcttggagcgtggcgttctgttgtggttggcaccggacgggctgtacgccaagcggctg
tgccaaggcagagtgtattgggaaggtccgctggcaccgtatgcagacaagccaaacaag
ctggagaaagagcagacctgcaagctgatggacacacagcagttcctctcagaattgcag
ggtttcattcaccatggccgccccatgccacgctctcaggtggtgctgtgctttggagac
gagttcccagaccctcagcggcagagcaaaatgatcacagctcaggtggagccaatgttt
gccagacagctcctgtattttgcaggccagaccaatggtcactacttgcgcggatatgag
cttcagagtcaaggtgctttacctgtagaagagtatcagagaagcatccaacacttgcaa
gagtaa
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