Ctenopharyngodon idella (grass carp): 127503150
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Entry
127503150 CDS
T08802
Name
(RefSeq) probable ATP-dependent RNA helicase DDX52
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127503150
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127503150
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
Helicases
127503150
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
127503150
NCBI-ProteinID:
XP_051732564
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Position
21:20945119..20952054
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AA seq
616 aa
AA seq
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MDAFDLFKKLGSGAKFDLKRFAKDAERFKVLKFQSKDSSQQLSGIKFFGTDTQEKTSPES
RPSEDDGEEEREGSDEEQAPGKRKLTEVDEPVKAARKKKKGDKRKSEDTEPEKSEGEGIQ
WMSSQDTAKDPEKKSKDKLSLKTLKQLHQEKVNRIRHQNRINVHGTDIPDPVSTFEELQK
EYDLDPRVIQNIKAAGFQTPTPIQMQAIPLMMHKREILACAPTGSGKTMAFCLPLLAHLR
QPLNKGFRALIISPTRELATQTHRELLKLSEGVGFRVHMINKGVDAVKKYGPKSAKKFDI
LVTTPNRLIYLLNQDPPAINLSSVEWLVVDESDKLFEDGKTGFREQLATIFLACSSPKIR
RVLFSATFATDVEQWCKLNLDNLVSVNIGPRNSAAETVEQQLLFVGSENGKLLAMRNLIK
QGFLPPVLVFVQSIDRARELFHELVYEGINVDVIHADRTQQQRDNVVSSFRSGKIWVLIC
TALLARGIDFKGVNLVINYDFPTSAVEYIHRIGRTGRAGHKGKAITFFTEDDKPLLRSIA
TVIKRAGCPVPDYMIGLKKIQRKLKRQLVKHPPRRSTIRTTPRILFDKKLGKGKRKKRKA
AAKEAKGEATEVISNS
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggacgcctttgacttatttaaaaagcttgggtctggagcaaagtttgatctcaaaagg
tttgctaaagatgcagagagatttaaggtactgaaatttcagagcaaggacagctcacaa
cagctgtctggaatcaagttttttggcacagacacacaagagaaaacgtctccagagtcc
agaccgagtgaagatgatggtgaagaagagagagaagggagtgatgaagagcaggcccct
ggtaaacggaaactgactgaagtggatgagccagtgaaagcagcacggaagaaaaagaaa
ggagataagagaaaatccgaagacacagaacctgaaaagagcgagggagaagggatccaa
tggatgtcatcgcaagacacggcgaaagaccccgagaagaagtctaaagacaagctctct
ttgaaaacactaaagcagcttcatcaggagaaggtgaatcggatacggcaccaaaaccgg
attaacgtgcatgggacagacattccagatcctgtttccacttttgaggagctgcagaag
gagtatgatctggacccacgagtcattcaaaacatcaaggcagcgggtttccaaaccccg
acacccattcagatgcaggccattcctctcatgatgcataaaagggagatcctggcatgt
gctcctacaggctccggtaagactatggccttctgtctgcccctgctggcccaccttcgc
cagcccctcaacaagggtttcagagccctcatcatctccccaaccagagagcttgccact
cagactcatagagagttgctcaagctgtcagaaggagtgggcttcagagttcacatgatc
aacaaaggagttgatgctgtgaaaaaatatgggcccaagtcagcaaagaaatttgatata
ttggtgacaactcctaacagattgatatacttattaaatcaagatcctcctgctatcaac
ttaagtagtgtggagtggcttgtggtggatgagtctgataagctctttgaggatggtaag
acgggtttcagagagcagcttgccaccatcttcttggcctgctcttctcccaaaatccgc
cgggttctcttcagcgcaaccttcgccacagatgtggagcaatggtgcaaactgaaccta
gacaacctcgtgtctgtcaacattggacccagaaactctgcagctgagactgtggaacag
cagctgctgtttgtgggttcagaaaatggaaagctacttgccatgagaaaccttataaag
cagggatttttgccaccagtgttggtctttgttcagtctattgaccgtgcccgagagctc
ttccacgaactggtgtatgagggaataaacgtggatgtgatccatgcggatcgtacacaa
cagcagagagacaatgttgtgagcagtttccgttcgggaaagatctgggtgctgatctgt
actgctctgctggctcgtggaatcgacttcaagggcgtcaacctggttatcaactatgac
tttcctacttctgctgtggagtacatccaccggatcgggcgaactggaagagcaggacac
aaaggaaaggcaataactttcttcacagaggatgacaaacctctccttcgcagcattgct
actgtcataaaaagggctggatgtcctgtccctgactacatgatcgggttgaagaaaatc
caacgcaaattgaaacgtcagcttgtgaaacatccacccagacggtcaactattcgcaca
acacctcgcattctctttgataaaaagctcggcaagggaaaaaggaaaaaaagaaaagct
gctgcaaaagaagcaaaaggtgaagcgacagaagtaatttctaacagctga
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