Ctenopharyngodon idella (grass carp): 127503301
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Entry
127503301 CDS
T08802
Name
(RefSeq) probable voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127503301
04020 Calcium signaling pathway
127503301
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127503301
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127503301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
127503301
NCBI-ProteinID:
XP_051732873
LinkDB
All DBs
Position
21:complement(9037321..9188285)
Genome browser
AA seq
2334 aa
AA seq
DB search
MSRMARFGDDLPTRYGGPAGAGRGGARAGGPSGGQRMYKQSMAQRARTMALYNPKQTKQN
CLTVNRSLFIFSEDNVIRKYAKRITEWPPFEYLILTTIIANCIVLALEQHLPAMDKTPMS
ERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILTTVGSQFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGVEFYMG
KFHLTCFNIETGEKVGDYPCGMEKSARQCPNGTTCKEYWKGPNFGITNFDNILFAILTVF
QCITMEGWTDVLYHANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVLLAEEDQNAEEKSPLDGAWYRRKQNNSVLK
RTKTRKGRNDLISAEEGEEHFTDISSVAPPGSPFARASLKSSKNDSSSYFRRKEKRIRFF
IRRMVKAQSFYWIVLCLVGLNTMCVAIVHYDQPEGLTKALYLAEFVFLGLFLTEMTLKMY
GLGPRNYFHSSFNCFDFGVIVGSIFEVVWAAIQPGASFGISVLRALRLLRIFKVTKYWNS
LRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDSFPAAIM
TVFQILTGEDWNAVMYHGIESQGGVRGGMFSSVYFIVLTLFGNYTLLNVFLAIAVDNLAN
AQELTKDEEEQEEAAKKSMALQKAMEVKEVSPMSAANISIAAFVKQNRDAISRRSSVCSV
HSPKEQQRSLQKMSIWEQRTNQLRRHNLRNSSEALYNELEPEERLRVSSALHLRPDMKAH
HDRPLVVEHRDGTVDSSKTDGDGDTRECQPSSANPRKHHRCRGENGDAGEGRHHRHHSRN
REHQGGLERSCSQDGGQRNHQMAGSPEEGIGIEEREHRHHHSRRSRELNGNGNGTIGNGG
RGESRIRGHREGEGGNGERKRHRPRVKAQSTLDGEECRENGKRRGRPTETDSLATSPLQS
PTDEKPEVTDNLKNSTRAGPTGVNIPVTITAPPGETIIIPMNNIDGDSLLLNEEKKDLDE
LNQNAPKHILPYSSMFVFGPTNPVRRLCHYVVNLRYFEMCILTVITMSSIALAAEDPVQA
HAPRNDVLKYLDYVFTGVFTFEMVIKMIDLGLLLHPGSYFRDLWNILDFIVVSGALVAFA
CSGTKGKDINTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFI
FAVIAVQLFKGKFFHCTDESKALEKDCRGQFLEYGSDGVAMTQPREWKKYDFHYDNVLWA
FLTLFTVSTGEGWPTVLKHSVDATYEDQGPSPGYRMETSIFYVVYFIVFPFFFVNIFVAL
IIITFQEQGDKAMSECSLEKNERACIDFAINAKPLTRYMPQDKQSYQYKMWKFVVSTPFE
YSILSMIAVNTVVLMMKFHDAPKPYEDMLKWLNIIFTALFTLECILKVIAFGPLNYLKEA
WNIFDFVTVLGSITDILVTEIKDKKINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSF
KALPYVCLLIAMLFFIYAIIGMQVFGNIKLNEESAINHHNNFQTFFQALMLLFRSATGEG
WHEIMLACLSERPCDDESGYSGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYL
TRDASILGPHHLDEFIRVWAEYDPAACGRMSYLDMYEMLRHMSPPLGLGKKCPPRIAYKR
LVRMNMPIAEDNTVHFTSTLMALIRTALEIKLASGVLAQRLCDAQLRKEINKIWPSLSSK
TVDLLVTPHKHNELTVGKVYAALMIFDYYKQNRAKRLQQQQAAPGTQSKVGVLFRPMLPL
THLHDQEPMLPKALPASQLETTPQPEAPPTSFHLTNGDAVQSQSSGMKKYPSGGIPQEAA
QEPNRRPVQRGQSEDVPNTYRSQELVEMSDMENDSDVGGYPVLEGHGRAASMPRLNAGFQ
RSHLRHTAGTYLAPIADVSPMRRSTSSLTPQRGVREVSLSEYDLERPQMASGQTLAQERE
RERAHHHHHHHHHRCQRRRDKKHKSLDRAISEEQPPPTADPNTESLPRERARERDRGRSH
ERKHHSSSAAERQQRYYSCDRYGSHEQGHSVSAGPSRATSPGEPHDPNRLKQGINTAKGS
SVAHTSGTSTPCRGRRQLPQTPLTPRPAVAYKTANSSPVQLNTAQSTGPCPTRLSRGLSE
HDALLSGNAHRQSPVPVTRISSDPNLGPLQQDSHLSEADDFHDALSTYGASRSPRTAPSV
TYTTSGATPTSTLLSRSQSGVPNGYHYSLGVNSAPGSSGRASGSYQETERDDWC
NT seq
7005 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatggctcgctttggagacgatctgcccacccgctatggaggtccagcgggc
gccgggagagggggagcccgggcgggaggtccctcgggcggtcaaagaatgtacaaacag
tcgatggctcagagagccaggacaatggctttatataatcctaaacaaaccaaacagaac
tgtctcactgtcaaccgctctttgttcatcttcagtgaagacaatgtcatcaggaaatac
gccaaaagaataaccgaatggcctccatttgagtacctgatcctcacaaccatcatcgcc
aactgcatcgtactggccctcgaacagcatctcccagccatggacaagacccccatgtct
gaacgcttggacgacacagagccctactttatcggaatattctgctttgaggccggcatt
aagatcatcgccctgggctttgtgtttcacaaaggctcttacctacgcaacggctggaac
gtaatggactttgtggtcgttctgacagggattttaaccacagtgggctcacagtttgac
ttaagaacgttgcgggctgtcagagtgctgagacccctcaaactggtgtcaggaatccca
agtcttcaagttgtattaaagtccataatgaaggccatggttccccttcttcagattgga
ctgctgctcttctttgccatcgttatgtttgccatcatcggtgtagagttctacatgggc
aagttccacctcacctgctttaatatagaaacaggagaaaaggttggtgattacccatgt
ggtatggagaaatccgcaagacagtgtcccaatggaacaacgtgtaaggagtactggaaa
ggacccaatttcggcatcacaaatttcgataacatcctcttcgccatcctcacagtcttc
caatgcatcactatggaaggatggactgatgtactatatcatgccaatgatgcctctggg
aacacctggaactggctgtacttcatccctctcatcatcattggctccttttttatgctt
aacctcgtcctgggtgtcttatcaggggaatttgccaaagaaagagagcgagtggaaaag
aggcaggagttcttgaagctccgcagacagcagcagattgagagagagctcactggatac
ctggagtggatctgcaaggcagaggaggtgttgctggcagaggaagaccagaatgctgag
gagaaatcacctctggatggtgcgtggtacaggaggaaacaaaacaactcagtcctgaaa
agaacaaagactagaaagggtagaaacgacctcatcagtgctgaagaaggagaggaacat
ttcacagacatctcctctgtcgcaccacctggatcacctttcgcccgagctagcctgaag
agcagtaagaacgatagttcctcatacttccgtcgaaaggaaaagaggatacgctttttc
atccggcggatggtgaaggcacaaagtttctactggatcgttctctgcttggtgggattg
aacacgatgtgtgtggctatcgtccattatgaccagcctgaggggctcaccaaggccctg
tacctggcagagtttgtattcctgggtctgtttctgacagagatgactctgaagatgtac
ggcctggggcccagaaactactttcactcctcgttcaactgttttgactttggggtaatt
gtggggagtatatttgaggtggtgtgggcagcaatccagcctggtgcctcttttgggatc
agtgttctgagagccctgcgcctgctccgtatctttaaagtaaccaagtattggaactct
ttgcggaatctggtggtttcactgttaaactccatgaagtccatcatcagcttgctcttc
ctcctcttcctcttcatcgtggtgtttgctctgctaggcatgcagcttttcgggggccag
tttaattttgaagacgaaacacccactacaaattttgacagcttccctgcagccataatg
acagtattccagattttgacaggagaggattggaatgcagtgatgtatcatggcattgag
tcccagggtggcgtccggggtggaatgttctcctcggtctacttcattgttcttacactt
tttggaaactacacacttctcaatgtattcttggccattgctgtggataacctcgccaat
gcacaggagctgacaaaggatgaagaggaacaagaggaggcagcgaagaagagcatggct
cttcagaaggccatggaggtgaaggaggtcagccccatgtctgctgccaacatctcaata
gcagcttttgtaaagcaaaatcgagatgcaatctctcgcaggtcttcagtctgcagcgtt
cactcacctaaagagcagcagaggtcactgcagaagatgtccatatgggagcagcgcacc
aaccagctgcgcagacacaatctgcgcaacagcagcgaggccctttacaacgaactagag
cccgaagagcgtctgcgcgtgtcttctgcactgcatctgcggcccgacatgaaggcccac
cacgatcggccactggtggtggaacatcgagacggcactgtggacagttccaagactgat
ggagatggagacactcgagagtgtcaaccgtcctctgcaaacccaaggaagcaccatcgt
tgtcgaggagagaacggagatgcaggggaggggcggcaccatagacaccacagccgaaac
agagagcaccagggcggcctggagcgcagctgcagtcaggatgggggacaaaggaaccac
caaatggctggctctcctgaggagggcatagggatagaggaaagagaacacagacaccac
cattctcgccgatccagagagctcaacgggaatggcaacggcacgatcggtaatggaggc
aggggtgagagtaggatacgaggtcacagagagggcgaaggagggaatggagagaggaag
agacaccggccccgcgttaaagcccagtccacactggatggagaagaatgcagggagaat
ggaaaacgcaggggcagaccgacagaaacagacagcctagccaccagccctctccagtct
cctactgatgagaagccagaagtcacggataatctaaaaaacagcaccagagcaggccca
accggagtcaacatccccgtcaccataactgccccgccaggagagaccataatcattccc
atgaacaacattgatggtgacagtctactgctgaacgaggaaaagaaggatcttgatgag
ctaaatcagaatgcgcccaaacacattctgccatacagctccatgtttgtgtttggccca
actaacccagtgagacggctgtgtcattatgtggtgaacctgcggtattttgagatgtgt
atcctcacagtcatcaccatgagcagcatcgctctcgctgctgaagaccctgtgcaggcc
catgccccccgcaatgacgtgctgaaatacctagattacgtcttcactggtgtgtttaca
tttgagatggttataaagatgatcgatcttgggctgctgttgcatcctgggtcttacttc
agggacctgtggaacatactggacttcatcgtagtcagcggcgctctggtggccttcgcc
tgctcaggaactaaaggcaaggacatcaacaccatcaagtccctaagggtccttcgagtc
ctgaggcccttgaagaccatcaaacgtttgcctaaactcaaggctgtgtttgactgcgta
gtgaactctctgaagaatgtgctcaacatcctcatcgtttacatcctcttcatgttcatc
ttcgccgtcattgctgtgcagcttttcaaggggaagttttttcactgcaccgatgagtcc
aaagccctggagaaggactgcaggggtcagttcctggagtacggcagtgatggagtggcc
atgacgcagcctcgcgagtggaagaagtatgatttccattatgacaacgtcctgtgggcc
tttcttaccctgttcactgtctctacaggagagggctggccaacagtgctgaaacattct
gtagatgccacatatgaagaccagggtcccagtccaggttaccgcatggaaacctctatc
ttctatgtggtctacttcatcgtcttccccttcttctttgtcaacatctttgtggctttg
atcatcatcacattccaggagcagggagataaagccatgtcagagtgcagcttggagaag
aacgagcgagcttgtattgactttgccatcaacgccaaacctctgacccgctacatgccg
caggacaagcagtcttaccaatacaagatgtggaagtttgtggtgtccactccatttgag
tactccatcctgagcatgattgccgtcaacacagtagtcctcatgatgaagttccatgat
gctcctaaaccgtatgaggacatgttgaagtggctgaacatcatcttcacggctctcttt
acactggagtgcattctcaaggtcatcgcctttggccctctgaactacctgaaggaggca
tggaacatttttgactttgttactgtgctggggagcatcacagacattctggttactgag
atcaaggataagaagattaatctgagtttcctgagactcttccgggctgctcgtctcatt
aaactcctccgacagggctacaccattcgcatcctgctctggaccttcgttcagtcgttt
aaggctctgccgtatgtgtgtctcctcattgcaatgctcttcttcatttacgccatcatc
gggatgcaggtgtttggtaacataaagttgaatgaagagtcagccatcaatcatcacaat
aacttccaaaccttttttcaggccctcatgttgttgttcagaagtgctacaggggaaggt
tggcatgagatcatgctggcttgtctgagcgaaaggccatgtgacgacgaatctggctac
agtggaaaagagtgcggcagtgatttcgcttacttctactttgtctctttcatctttctt
tgctccttcctgatgctgaatctgtttgttgctgtcatcatggataactttgagtacctg
acacgtgacgcttctattctcgggcctcatcacctcgacgagttcatccgggtctgggcc
gagtacgaccctgccgcctgtggacgcatgtcctacctcgatatgtacgagatgcttcgc
cacatgtcccctccgctaggtttgggaaagaaatgtcctccacgaatcgcctacaagcgg
ttggtgaggatgaacatgcccatagctgaagacaacactgttcactttacctccacttta
atggctctcatccggaccgccctggagattaaactggcatcaggagttctggcccagcgc
ctttgtgatgctcagttaaggaaggaaataaataaaatttggcctagcttgtcttcaaaa
acagtggatttgctggtgacacctcataaacataatgaattgactgtagggaaggtctat
gctgctctgatgattttcgactactataagcagaaccgagccaagagactccaacagcag
caggctgcaccaggcacacagagtaaagtcggagttctcttcagaccaatgcttcctctc
acacacttgcatgatcaggagccaatgctgccaaaagccctacctgcttctcaattagag
accacaccacagccagaggccccgcccacctcctttcacctgaccaatggggatgcagta
caaagccagagcagtggcatgaaaaagtatccctcaggaggtatacctcaggaagccgca
caggaaccgaacagaaggcctgtccaacgtggccaatcagaagacgtgccaaacacatac
agatctcaggaattagttgagatgagtgacatggagaatgactcggatgtgggtgggtat
cctgtgctggagggtcacggcagagctgcctccatgccaagactcaacgctggctttcag
cggagccacttacgccacaccgccggaacgtatctagcacctatcgcagatgtgagtccc
atgcggcggtctacatcctcattgactcctcagagaggggtgcgagaggtcagtctgagc
gaatatgacctggaaaggccccagatggcctcaggtcagaccctcgctcaggagagagag
agggagcgagcccatcatcatcatcaccatcatcatcaccgctgccagcggcgcagagac
aagaagcacaaatcactggatcgagccatcagcgaggagcagccaccgcccacagcagat
ccaaacactgagtcattgcctagggaacgagcgcgggagcgtgatcgtggccgctcacac
gagaggaagcaccattcatcctcagcggcggaaagacagcagcgatactactcgtgcgac
cgctacggcagccatgaacagggccacagcgtgtccgctgggcccagccgggccacatca
ccaggagaaccacatgacccaaacaggcttaaacagggaattaacactgctaaaggaagt
tcagtcgctcatacctcaggcaccagcacaccctgccgtgggcgtagacagctccctcag
acgccccttactcctcggccggctgttgcctacaagactgccaactcctctccggtccag
ctcaacactgcccagtctacagggccctgccccactcgccttagtcgtggcctgtcagag
cacgatgccctacttagcggtaacgcccaccgccaatctcccgtgcctgtcactcgtatc
agctctgaccccaacttaggtcccctccagcaagactcgcacttgtctgaagcagatgac
ttccacgatgccttgagcacgtacggtgcgagccgttcccccaggactgcaccctccgtc
acctacacaacatcaggtgcaacccccacttccacgctgctctcgcgcagccagagcgga
gtccccaatggctatcactactccctcggagtgaactcggcacctggttcgagcggccga
gcatctggaagctaccaggagactgagagagatgactggtgttag
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integrated database retrieval system
