Ctenopharyngodon idella (grass carp): 127503347
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Entry
127503347 CDS
T08802
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127503347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127503347
03036 Chromosome and associated proteins [BR:
cide03036
]
127503347
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127503347
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
127503347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
127503347
NCBI-ProteinID:
XP_051732984
LinkDB
All DBs
Position
21:20062344..20083806
Genome browser
AA seq
1807 aa
AA seq
DB search
MFNKSFGAPFGGGTGAFGTSSTFGQQNTGFGATGGFGSSAFGATNNTGGLFGTTQNKPGG
LFGSSTFSQPVTSSTSTGFGFGATSGTSNSLFGSTNTGGGGLFSQQSNAFGANKPATFGT
FGTSTSSGGLFGTTNTTSNPFGGTSGSLFGASSFTAAPPGTTIKFNPPTGSDTMVKGGVT
TSINTKHQCITAMKEYENKSLEELRFEDYQAGRKGPSNPMAAGTGGLFGPTAAATPSTGT
GLFGSSAPNTGFNFGQTKTSFGTSTGAFGTTTGSLFGQPQQQASSLFKPFGSATTTQNNT
FSFGNTNTMGQPNTSSMQGLFGNTAASQAGGLFGNTNTSTATGFGTGIFGPTNTGFGNVG
TQNLFGNKPAGFGTTTTSAPSFGTGTGLFANKPTLTLGTNTNTSTFGFGATGTGGGLFGN
KTATTGLGTGLGTGFGGAVGTGQTSLFGNNQNKLGSTLGSVGTFGTGGFNTGANTLNFGA
PQQPVALTDPSAAAAQQAVLQQQINALAYSPFGDSPLFRNPLSDPKKKEERLKPTNPAAQ
KALTTPTQYKLTPRPATRVRPKALSSSGSSKSQLFDGLDDDEPSLNNGAFMPRKSIKKLV
LKNLNNSSLYNNSGNREVDDLASPSEYPQNGLSLSMDEGETREVSVERSGEDDLEVSKFY
TNPITKPIPHAQPSPLLQDTISEFNMRGTGSHRNGFEASSEDISLAEDSIQEERDEELEA
QKPPHPAGIVLGRVGYYTIPSMEELGKMLNENGECIVENFTVGRKGYGSVFFSGEVNLTN
MNLDEIVHFRRKEIIVYPDDKDKPPVGEGLNRRAEVTLDGVWPNDKTTCCQIKSLERLTE
MNYEGRLEAASRKQGARFLEYRPETGSWVFEVAHFSKYGLQDSDEEEEVPPAKLDLKKLK
TGVPPGIPQLPLTQQQMAPQAQSTAVLELLSRVSELDSDMADITQEHPADSVLGEEDGER
TSLEEHKLRSETPAEHEPMSASSQIASSMGINPHTLQIMKASLFAEDDECDLFQEHVSSK
LIQDVASPKVLLSGAGRLSIGALLQTKFTSGGGLFSQFPEAPFGGIPQKISKSLASEAPW
PSLGPSFLLPAPPPEPTLRTIGARRLGGPVPLESSVTLGKGRLLMDAALFRGRSFRVGWG
PNWTLVHCGDQVSVTETMKEQAAESMGFGFLPKPTKSKPITESLFKVHMEQVVGLEPKQS
AESLALYHRPLEISLKHSTINTEDPCPFIQPERGVDALHGYAEWIVEVNKDTGGDVGLAH
WRQVWTLCAALWGRLGDRDVETEQYSDYQQQLERRRSFSHWLSESSAECIEEEVGRALQR
NHAEAVFSYLTGHCLSKACKLSQKSGDHRLSLMLSQAVGSQFCRDLLALQLSDWNRMQTD
SFIEEERLRIFALLAGKPVWQSTDYCINVCSELDWKRCVAVHLWYMLPPTASVADALAKY
ESAFQGSEEMKRYACPPLPPYVDELELLGLDEEMDETESKKSLYDICFHLLKLYSDRHYS
LQQLLDPSTVTADHLDYRLCWHLWNVLQALNYNHLSTSCQGLLHTSYAAQLESAGLWEMA
IFVLLHIPDSGRRESAVREMLNLHCPLEETEESMEKEQFLTEKLLIPIQWIHQAKAIRAC
REGDKHCEALHLYKAGHWNHCHRLVIQHLASDCIINDNHKYLLEFLEGLAVPERSVQIQS
WDTSGRVYLDYIHVIQTLQDIQQTESPGYELERLHTEVTSLCGRIELLPCSKAKDRLAQS
EMAKRVANILRVVLSLQQGGEGTPDPRHIPLCQLAPHIGRLPMPEDYALEELRSLTQSYL
QEYVISH
NT seq
5424 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacaagtcttttggtgctccctttgggggagggacaggagcatttgggacttca
tcaacatttgggcaacaaaatactggctttggagcaacaggtggctttggatcttcagcg
tttggtgcgacaaacaacacaggaggacttttcgggaccacccagaacaagcctggtggt
ctctttggctcgagcactttcagtcagcctgtcacctcctccaccagtactgggtttggg
tttggtgccactagtggcacatcaaacagcctttttggaagcaccaacaccggaggtgga
ggactgttttcccagcagagcaatgcctttggtgccaacaaaccagccacttttggcact
tttggtaccagcactagtagcggtggattgtttgggacaaccaacacgacatccaaccct
tttggaggaacgtcaggctctttgtttggggcatcaagtttcactgctgcaccccctggc
acaacaatcaaattcaatccaccaactggtagtgacacaatggtaaaaggtggtgtgaca
accagcattaacaccaaacaccagtgcatcactgcaatgaaggaatatgagaacaaatcc
ttagaggaattgaggtttgaggattaccaggctggaaggaagggtccttccaatcccatg
gcagctggcacagggggtctctttggaccgacagccgcagctactcccagtactggtact
ggactctttggctcatcagctccaaacactggcttcaacttcggccagaccaagacctca
tttggcacgagcactggggcatttgggacaaccacaggaagtttgtttggccagccgcag
cagcaagcttccagtcttttcaaaccattcggctcagccactaccacccaaaacaacact
ttctccttcggcaacaccaataccatgggccagcccaataccagcagcatgcaggggctg
tttggcaacacggctgcctctcaggctggaggactttttggaaacactaacacaagtacc
gccacaggctttggcacaggaattttcggtccaactaacaccggctttgggaatgtgggt
acacagaatctttttggtaataaacctgctggatttggcaccaccaccactagcgcaccc
tcctttggcacaggcactggtctgtttgcaaataagcctacactcactctagggactaac
acgaacacctcaacctttggtttcggtgcaactggtacaggtgggggtctttttgggaac
aaaactgctacgacaggactgggaacaggattgggaactggcttcggaggagctgtagga
actggccagacgtcattgtttggaaacaaccagaacaagctgggctccactctggggtca
gtgggcaccttcgggactggaggcttcaacaccggagccaacactctgaattttggtgct
cctcaacaacctgtggctctgactgaccccagtgcagcagccgctcagcaggccgtcctc
cagcagcagattaacgcattggcctactctccatttggagactcacccctctttagaaac
ccactgtcggaccccaaaaagaaggaagagcgtctcaagcccacaaatccagctgcccag
aaagccctgactacccctactcaatacaaacttacccctcgtcctgccacccgtgtgcgt
cccaaagcgctctcctcctctggctcatccaaatctcagctcttcgatggacttgatgat
gatgaaccttctcttaacaatggagctttcatgcctaggaagagcataaagaagcttgtg
ttgaagaatctgaataacagcagtctgtataataactctgggaacagagaggttgatgac
ttggcctccccttcagagtacccacagaatgggctcagtctgagtatggatgaaggagag
accagagaagttagtgtggagagaagtggggaggatgacctagaggtctccaagttctac
accaacccgatcaccaaacccattccacacgcccagccaagccccttgctacaggatacc
atctcggagttcaacatgcggggaactggcagtcatcgcaatggctttgaggccagcagt
gaggacatttctctggctgaggattccattcaggaggaaagagatgaggagctggaggct
cagaaacctcctcacccagctggtatagttcttggccgtgtaggctactacaccatccca
tccatggaagagctgggaaagatgttgaatgaaaatggggagtgtattgtggagaacttc
actgttggcaggaaaggctatgggtcagttttcttctctggtgaggtgaatcttaccaac
atgaacctggatgagattgtgcacttcaggcgtaaggagataattgtgtaccctgatgac
aaagacaagcctcctgttggagagggactaaacagacgtgctgaagtgactctagatggt
gtgtggcccaatgacaagacaacgtgctgtcagatcaagagtctagagaggctgactgag
atgaactacgagggccgtctcgaggcagcctcgcgcaaacaaggcgcccgcttcttggag
taccgacccgaaactggctcctgggtctttgaggtggcccacttctcaaagtatggcctg
caggattctgatgaagaagaggaagtccccccggccaagctggacctgaagaagctgaag
acaggggttcctcctgggatcccacagcttccactgacccagcagcagatggcgccacag
gctcagagtactgcagtacttgagctgctcagccgtgtgtcggagttggacagtgacatg
gctgacattactcaagagcacccagcagacagtgttttgggagaggaggatggagagaga
acttctttggaggagcacaagctgagatctgagactcctgccgagcatgagcccatgtcc
gcatccagccagattgcttcctcaatgggcatcaaccctcataccttacagattatgaag
gcatctctctttgcagaggatgatgaatgtgacttgtttcaagagcatgtttcttcaaag
ctcatacaagatgtggcttcccccaaagttttgctttctggagctggtcggctatcaatt
ggagccctgttacaaacaaagttcacctcaggtggagggcttttttcccagttcccagag
gctccttttggtggaatacctcagaagattagcaagtcactagcatctgaagccccatgg
ccatcattgggtccatccttcctgttgccggcccctcctccagaacctacgcttcggacc
attggggcccgtaggctaggtgggccagtacctctggagagctctgtaactttagggaaa
ggccgtttactgatggacgcggctctgttcagagggcggtctttcagagtgggctggggt
cccaactggacactggtgcactgtggagatcaagttagtgtcacagaaacaatgaaggaa
caggcagcagagagcatgggttttggtttcttacccaaaccaaccaagagcaaaccgatc
actgaaagtctgtttaaagtgcatatggagcaggtggtcggcctggagcccaagcagtca
gctgagagccttgctctttaccacaggccactggagatcagtctaaagcacagcacaatc
aacacagaggacccctgtccttttattcagccagagagaggagtggatgctctgcatggt
tatgcagaatggattgtggaggtcaacaaagatacaggaggggatgttggcctggcccat
tggcggcaagtttggactttgtgtgctgctctgtggggtcgtctgggtgaccgagatgtg
gagactgagcaatactcagactaccagcagcagcttgagaggcggaggagcttctcacac
tggctctctgagagctcggctgagtgcattgaggaggaggtgggccgggcccttcagcgc
aaccatgctgaggctgtattcagttaccttaccggtcactgcttaagcaaggcctgcaaa
ctgtcccagaagagtggggaccatcgcctttcactgatgttgtctcaggctgtgggctct
cagttttgtagagatctattggctctgcagctcagtgactggaacaggatgcagacagac
tccttcatagaggaggagaggctgcgaatctttgctttgcttgcaggcaaaccagtgtgg
cagtcaacagactactgtataaacgtgtgctccgagcttgactggaagcggtgtgttgct
gttcatctctggtacatgctgcctcccactgcatctgtagctgatgctcttgccaaatat
gaatctgcatttcagggttcagaggaaatgaaaaggtatgcttgccctcctttacctccc
tatgtagatgaactcgaattgttgggtttggatgaagagatggacgagacagaatccaaa
aagtcactctatgacatctgcttccacctacttaaactttacagtgacaggcactacagc
ctacaacagctacttgatcccagcacagtaactgctgatcatctggactaccggctgtgc
tggcacctgtggaacgtgttgcaggctcttaactacaatcacctgtccacctcttgccag
ggcttgctgcacaccagctacgctgcccagctggagagcgcaggattatgggagatggct
atctttgtgctgctgcacatacctgactctggacgtagagagagtgcagtgcgggagatg
ctcaacttgcactgcccccttgaggagacagaagagtcaatggagaaggagcaatttctt
acggaaaagttgctgatccccatccagtggatccatcaagccaaggccatccgtgcctgc
agagagggagataaacattgtgaagccttgcacctttacaaggctggccactggaatcac
tgtcatcggctggtcatccagcacctggcctcagactgcataattaacgataatcataag
tacctactggaattcctggaggggttggcagtgccagagcgcagtgttcagattcagagc
tgggacacatctggacgggtctaccttgattacatccatgtcatccagactttgcaggac
atccaacagacggaaagcccaggttatgagctggagcgactgcatacagaggtgacgtct
ctctgtgggagaatagagctcctcccctgctccaaagctaaagaccgacttgcccaatca
gagatggccaaacgtgtggctaacatcctgcgagtggttttgagtctccagcagggtggt
gaaggcaccccagatccccgacacatccctctttgccagcttgctccacacattggacgt
ctacccatgccagaggactatgctttagaggaactccgcagccttactcagtcgtacctg
caagagtatgttatcagtcactga
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