Ctenopharyngodon idella (grass carp): 127503357
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Entry
127503357 CDS
T08802
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 1 isoform X1
KO
K15144
mediator of RNA polymerase II transcription subunit 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127503357
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Middle
127503357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med1
Motif
Other DBs
NCBI-GeneID:
127503357
NCBI-ProteinID:
XP_051733008
LinkDB
All DBs
Position
2:25323684..25956844
Genome browser
AA seq
1782 aa
AA seq
DB search
MAAMLSSSPGADSSHSGTAAGSERLRAEDGSESEKQSRMTALLEKLYSKHNSSRSWQETS
KVVRQAMEKRGVINTAGHQLLLNCLETLQRAQKVSSLPSMTDRLESIARQNMLGSHLSPS
RTECYITSDMFYVEVHLDKAGKLVDVKVAHHGENPVSCPELIQHLRDKNFDEFSKHLKGL
VNLYKLPGDNKLKTKMYLALQSLELDLTKMMHMFRIATKANAVETILRGSVGLLTARSGG
HLVSLQCYVSPDDIFEEGTGAQLNFTDVNIPRTLGVSVSVTVEGTTSVYKLPIAPLITGS
HPVDNKGTPSFSSVTNSNCVDLPACFFLKMNCLMPFSVSYIKKMGSSTGIPVFETAPTLS
PLYDLIIKSQLHEDGGASPPALGQTMRFYASLPGQQHCYFLNGDAPVQDGRCLQGALVSK
IPFRHPAQVPALLDIIRHQAAYNTLIGSCVKKTYIKEDSPGLLQFEVCPLTDSSFSVSFQ
HPVNESLVCVVMEVIDSMQVACKLYKGLSDALICTDDFITKVVQRCMSIPVTMRAIRRKA
ETIQADTPALSLIAETVEIMVKKNLPPTGSPGYMGMGTGPDGSNPMGLPGLSSGTNTAGS
NNVVGVGGSGSFQGPITSLFNMGRTGQGGSCMDTMGQVGGQQQAMQQQHQQSQSHSSDDF
NKVTQNPILTSLLQITGSVGSSPTPQPSQPHQTPPTTTSPASNTKNHPMLMNLLKDNPSQ
DFAALYSSSPLERQNSSGSPRTDSQGQSCPGAKGKKKRPRGSDKGVMGAGGGMSMKQQLQ
QQVGGMTQQHHHTHHSEDDFHRELFSMDVDASQNPIFDVSLPGDGLDTPHSITPAPSQCG
TPPSGPGIPYHPHCHVQPQTQVQSQPQGSIPCMVRLSSSDSIGPDINDILSDIPDQANKG
SNSSHGQHLMAGEEGGSMGTPLRDSSSSGQGSTVFEADLFNANSNENPFTDAADLIAEAA
TAATPNSDSSSTNFFPDTDFNPELLSGQGSFSQTYFEDSSPSPDPDLELVKSFSGGSQQN
TPTGTPQNPASHGQNTPEASLKDPFEMGIFVGNGAGGKPILGPASDMTDSHPSHTGGGQS
PLMMGIVVAGNDFKSGDTKVKQQQMRAKEDHGGGNSGIGMGSVCSSEMKQVKRSRTPSSE
GKSKDKTSKRKKLDPDGKSPSHSSGGRPYTPPSGSATSGGLVNAGGSKSPGSSGRSQTPP
GGATPPIPKITIQIPRTLTGGKTSSHGGYTSSSSTSGSTGSTSGTSNSKSHHSHSSSSSG
KIKSSKLEGSVGQGNIPKPSSIAGIGSGMPSQSKGSSMGMGTGKQSSSPITKHGLSGSVS
GSSSGTGSGNKNKPQGGKPPGSLMNPNIKPNISPSHSRSGSSDKLSSPMKLQQGQVPGTP
PSSKAKSPIGSGSGGSGGSKSSSGGGMGTQKQLGSSSSTSTSTSSTSSASSSSSSGSMPF
SSSGHSQYGNSGGSCSGGGGGGSGSNPNAKGKSPSRNKKPSLTAVIDKLKSVGSGGIGGE
EGEGCGGTAGGVMPQNTGPTSSKHGMSSQGGDFLNKRDKTDKDGKSKVSGSGSNSGDKKM
IDSKSSAVTGTGVAKIIISKPEGGSPSIKSKVTLQKPGEISGDGAMRSQHSGHKASPLFS
GSTPKHDRSSPSHSRSPGYTPVNPDSESESGSSSIAEKSHQNSPNSDDDQTMRPHQPMQD
YMSSISINQSEKHKKHKKEKKKQKERDRDRDRDKEKKKSTMSCGPSSHTAKTDGWSRSPI
SSETSMLLLSSERSSRPSPVYMHTEDDDLMDSALTGNLEPFK
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgatgctaagtagcagcccgggcgcagactcatcccacagcggcacagccgcg
ggctccgagcggctccgagctgaagatggatctgagtcagagaaacagagtcgtatgacg
gccctactggaaaagctctacagcaaacataactcatcccggtcctggcaggagaccagc
aaagtcgtgcggcaggcaatggaaaagcgtggggtcattaatacagctggacaccaactg
ctgctcaactgtttagagacactgcaaagggcacaaaaagtatcttcgttgccatcaatg
acggatcgtctggagtccattgctcggcagaacatgttgggatctcacctgagtccctca
cgtactgagtgctatatcacctcagatatgttttacgttgaggtgcatttggataaagct
ggaaagcttgtggatgtcaaagtggcccaccatggtgaaaaccctgtgagttgtcctgag
ctgatacagcatttacgagacaaaaattttgatgagttttccaaacacctgaagggtctg
gttaacctgtataagctccctggagacaacaaattaaagacaaagatgtatctggctctt
cagtccctggagttagacctcaccaagatgatgcatatgttcaggatagccactaaggca
aatgctgtggagaccatacttcgcggtagtgtgggtctgttgacggcgaggagcggcggt
catctagtatctctacagtgttatgtttctccagatgatatctttgaagagggaacagga
gcccaactgaacttcactgatgtcaatattccccgtactttaggtgtgagtgtgtcagtg
actgttgagggcaccacatcggtttacaagcttcccattgctccgcttatcacaggatcc
catccagtcgacaacaaagggactccatcattttcttctgtaacaaactcaaactgtgta
gatttaccagcgtgtttcttcttgaagatgaattgcttgatgccattctctgtatcatat
attaaaaaaatgggcagttctacaggtatccctgtttttgagaccgcgcccaccttgtcc
ccactatatgatctcatcattaaaagccaactgcatgaggatggaggggccagtcctcct
gctttgggccaaacaatgcgtttttatgcatctttaccaggacagcaacattgttatttc
ctaaatggtgatgctccagtgcaggatgggaggtgtcttcaaggagctttggtttccaag
attcccttcagacatcctgctcaggtgcctgccctcctcgacattataagacatcaggct
gcttacaacacgcttattggcagctgcgtcaaaaagacctacattaaggaagattctcct
ggactgctgcagtttgaagtgtgtccactaacagactcaagctttagtgtgtcctttcag
caccctgttaatgaatcacttgtatgtgtggtgatggaggtgattgattcgatgcaggta
gcctgtaaactctataagggtttatctgatgctttgatctgcactgatgacttcattacc
aaagtagtccagagatgcatgtccattcctgtgactatgcgcgccatccgacgcaaggca
gagaccattcaggcagacactccagcattgtcccttattgctgaaactgtggaaattatg
gtgaagaagaacttgcccccaactggcagcccaggttacatgggaatgggtacagggcca
gatgggagcaacccaatgggtcttcctggtttaagtagtgggaccaacactgcaggaagc
aacaatgttgtgggtgtagggggaagcggttctttccaaggcccaatcacctcacttttc
aacatgggtcgtactggtcagggaggctcatgtatggacaccatgggacaggttggaggc
cagcaacaagcaatgcaacaacaacatcaacaatctcagagccacagttcagatgacttt
aacaaagtcactcaaaatccaatcctaaccagtcttctgcagataacaggcagtgttggg
tccagtcctactccccagccatctcagccccaccagaccccaccaacaaccacctcaccg
gcaagcaacaccaaaaaccaccctatgctgatgaacctactgaaggataatccctcacaa
gattttgctgcattgtacagcagtagccctctagaaagacagaactcatctgggtcacca
cggacagatagccaagggcagtcttgccctggtgccaagggcaagaaaaagcgtccaaga
ggctctgataaaggagtaatgggagcaggtggcggaatgagcatgaagcaacaattgcag
cagcaagtgggaggcatgacccaacagcatcatcacacacaccactctgaagacgatttc
caccgagagcttttctctatggatgttgatgcctctcagaaccccatttttgatgttagt
cttccaggtgatggacttgacactcctcatagtatcactccagctccaagtcagtgtggg
acacctccttcaggtcctggaataccataccacccacactgtcatgtccaaccacagaca
caagtccagtctcagccacaaggatccataccctgtatggtccgcctctccagctctgac
agtattgggcctgatatcaatgatattctttctgatattcctgatcaggccaacaaagga
agcaatagcagtcatggccaacacctcatggctggtgaagaaggaggttccatgggaact
ccactccgggattcttccagttcaggccaaggtagcacagtgtttgaggcagacctgttt
aatgcaaatagcaatgaaaatccctttactgatgcagcagacttgattgcagaagctgct
actgcagcaacacccaatagtgattcttcctcaactaatttcttcccagacacagacttc
aacccagagcttttatctggacagggaagcttttcacagacctattttgaagacagctcc
cccagccctgacccagatcttgaactggttaaaagttttagtggaggaagtcagcagaat
acacctacaggcacacctcagaatcctgcctcacacggccaaaatactccagaggcttca
ttgaaagacccttttgaaatgggtatttttgttggaaatggtgctggaggaaagccaata
ctgggtccagcatcagatatgacagactcacacccttctcatactggtgggggccaaagt
ccactcatgatgggcattgtggtagctggtaatgattttaaaagtggtgatacaaaggtt
aaacagcagcagatgagggcaaaggaagatcatggaggaggaaattctggaataggaatg
gggagtgtatgctcttctgaaatgaagcaggtaaaacgcagtcgcactccttcaagtgag
ggcaaatcaaaagacaaaacatcaaaacgcaaaaagctggatccagatggcaagtcacct
tcacacagctcagggggccgaccttacactcctccttctgggagtgccacttccggagga
ttagtaaatgcgggtggatctaagtcccctgggagctcaggcaggtctcagaccccacca
ggaggtgctactccaccaatcccaaaaatcactatacagatacccaggactttaactgga
ggaaaaacatcatctcatggaggctacacatcaagtagctcaacaagtggaagcactggt
agtacaagtggcacaagcaatagcaaaagtcaccattcccactcttcctcttcttcaggg
aagataaaaagtagtaaacttgaaggctctgttgggcaaggcaatattccaaaaccatca
agcattgcaggtattggaagtggtatgccttctcaatccaaaggatcttccatgggaatg
ggcacaggcaagcaatcctcctctcccataacaaagcatggtttgtcaggctcagtcagt
ggtagcagcagtggaacaggaagtggaaacaaaaataagccccaaggtggtaagcctcct
ggctcactcatgaatcccaacatcaagcccaacatatcaccctcacactctcgttctgga
agttcagacaagctgtcctctccaatgaaacttcaacaaggccaggtgcctggaacccca
ccctcatctaaggctaaatcccctattggctcaggtagtggaggatcaggagggtccaag
tcctcttcaggtggtggaatgggtactcaaaaacagttaggcagtagctcatccacaagc
acttctacatcttctacttcctctgcaagctcctcctcatcatctggctccatgcccttt
tcttcaagtggtcattcacaatatgggaacagtggtgggagttgcagtggtggagggggt
ggtggcagtggaagcaaccctaatgcaaagggaaagtccccaagccgaaacaaaaagcca
tctcttactgcagtcattgacaaactgaagagtgtgggtagtgggggcattggtggggag
gaaggtgaaggctgtggtggcactgcaggtggggtaatgccacaaaatactggtcctaca
tcctccaagcatggtatgtcctcccagggaggtgattttctgaacaagcgagacaagaca
gacaaagatggcaaatccaaggtgtctggatcagggagcaattctggtgacaagaagatg
attgattctaaaagtagtgcagtgactggcaccggtgtagcaaagattattattagcaag
ccagaagggggttctccaagtattaaatctaaagtaacccttcagaaacctggagaaatt
tctggagatggtgccatgcgttcccagcactcaggccacaaagcatcacccctttttagt
ggctctacaccaaaacatgaccgcagctccccaagccacagccgttctcctggctacacg
cctgtaaatccagacagtgagagcgagtctggtagcagttcaattgctgaaaagtctcat
cagaacagtcctaactctgatgatgaccaaactatgagaccacaccaacccatgcaagac
tacatgagttccatatccattaaccagagtgaaaaacacaagaaacataaaaaagagaag
aagaagcagaaagagcgggatagggacagagatcgagataaagaaaagaagaagtcaaca
atgtcttgtgggccctcctctcacacagcaaagacagatggctggtccagatcccctata
tcttcagaaacttcaatgctgttgcttagctctgagcggtcctcacgtccaagtcctgtg
tatatgcatacagaggatgatgacctcatggactctgccttaacaggcaatctagaacct
ttcaaataa
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integrated database retrieval system
