Ctenopharyngodon idella (grass carp): 127503397
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Entry
127503397 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like isoform X1
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
cide04144
Endocytosis
cide04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127503397
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
127503397
09144 Cellular community - eukaryotes
04530 Tight junction
127503397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127503397
04121 Ubiquitin system [BR:
cide04121
]
127503397
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127503397
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
127503397
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
HECT type E3
127503397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
MUG113
Motif
Other DBs
NCBI-GeneID:
127503397
NCBI-ProteinID:
XP_051733053
LinkDB
All DBs
Position
21:complement(7118680..7207632)
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AA seq
1290 aa
AA seq
DB search
MSHRLRLYFGSGRSNTAPELEELNGTVEDRDERGYSGAGAMMFHAQPRNGGLAEIPELGS
VDVSDASLKRSSSMFIPQLQGQTEPRTTKSTSVQISLQRSNATQEDTLPFDPPPGYPQDP
APAYTEPGESWHLPPPPAYHREETTYCQNVEQSQPGTEPIQPKRQVFCVRPCDGQNGYAS
LGVPNGSPQGITIGGFSIQRRSADGSDVQQFRITPYSEDGQNGHRWSVQQSSDRGPGMQR
LVFQLQQDQGRHPSPTSQADTSDLGITGSKGSRLVRYPRIRLERSASQPLQFRGAPSRLG
SMPNLHAPISEMETESEIVENRAQGCTFKIRKEQNSRQPKFKIYFSQGGEHSPILARDIS
FGKAPTCSSPQGHIGLDRFKNGHFNHGQTRDDFLGQVDVPLTHLPTEDPAMERPYTFKDF
LLRPRSHKSRVKGYLRLKMAYLPKNGGHEEESSEMREEAEGWEVTDSTDPGSQRPQQLLP
PLPPGWEEKVDNLGRTYYVNHNNRTTQWKRPSSVDVVSETENDNNLRQINQEAHRVFRSR
RHISEDLENEQLDIRDIDDSWEPISEEDPTLVTDVLNHSLSGPSSLAMPLSSTPEFSDEI
SLRLSLAPDTNGEIPGPSSAVQSHLSSRLRSSSMTDGVSDQTQPPTPTQNSQTRRTRAQT
VTGVEDTMSPSASYALTTPGLPPGWEERKDPKGRTYYVNHNNRSTTWTRPILQHTEDGAS
TSAAAEGGATAATPPASTPSSSSGHLSEPQVRRPRSLSSPTVTLSSPLEGANNAPIRRAV
KDTFSNPQSPQPSPYSSPKSQHKANQSFLPPGWEMRIAPNGRPFFIDHNSRTTTWEDPRL
KYPVHMRTKASLDPGDLGPLPNLPEEPGWEERVHADGRTFYIDHNTKKTQWEDPRLQSPA
ITGPAVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSLKRPDSLK
ARLWIEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNED
HLSYFKFIGRVAGMAVYHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILE
NDPTELDLRFCIDEDNFGQTYQVDLKPSGSDMVVTNDNKKEYIDLVIQWRFVNRVQKQMN
AFLEGFTELIPIDLIKIFDENELELLMCGLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWK
AVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNR
LDLPTYESFEDLREKLLMAVENAQGFEGVD
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccggcttcggttatattttggatctggacgcagtaacactgcaccagaattg
gaggagctgaatgggaccgtggaagacagagatgagagaggctacagtggcgcaggggcc
atgatgttccatgcgcagccgcgaaacggaggacttgctgaaatcccagagttgggttca
gttgatgtttcagatgcctctctaaagcgaagctcttccatgttcatcccacagctccag
ggtcaaactgaaccacggacgaccaagagcacctctgtccagatatctctacaacgctca
aatgcaactcaagaagatacattgccctttgatcctcctccagggtaccctcaggatcca
gctccagcctacactgagcctggtgaaagttggcacttacctccacctccagcttaccat
agagaagaaaccacatactgccagaatgtggaacaaagtcaaccaggtactgagcccatc
caacctaagaggcaagtcttttgtgtccggccatgtgatggacaaaatggttatgctagt
ttgggtgtacccaatggaagtcctcaagggattaccattggaggtttcagtattcagaga
agatccgcagatggctcagatgtccagcagtttaggatcacgccatacagcgaggatgga
cagaatggccaccgttggtctgtccagcaaagctcagacagaggtcctggcatgcaaaga
ctcgtcttccagcttcaacaggaccaaggacggcacccaagccctacttctcaggctgac
acgagtgatttaggcatcacaggttctaaaggcagccgcttggtgcggtatcctaggatc
cgacttgagaggagcgcttcacagccgttgcaattcagaggagctccttcacgcctcgga
tccatgccaaaccttcatgccccgatctcagaaatggagactgaaagtgagattgttgag
aacagagctcaaggctgcacattcaaaattaggaaggaacagaactcgcgacagcccaag
tttaagatctatttcagccagggaggcgagcacagccccattcttgcacgggatattagc
tttggaaaggcgcctacctgcagcagtccacagggtcacattggtcttgatcggttcaag
aatgggcatttcaaccatggtcagaccagagatgacttcctcgggcaggtggatgtgcct
cttacccatttaccaacggaggaccctgcaatggagcggccgtacacgtttaaagacttt
ctcctgcgtccaagaagtcataagtctcgggtgaaaggctacctgagactgaagatggcc
tacctgccaaagaacggagggcatgaagaggaaagcagtgagatgagggaagaggctgag
ggctgggaagtgacagactccactgatccgggttcacagagacctcagcagctcctgcct
ccgctgcctccaggctgggaagagaaggtggataacctgggccgaacctactacgtcaac
cataacaaccgcaccacgcagtggaagaggcccagtagtgtggatgtggtttcagaaacg
gaaaatgataataatttgcggcagattaaccaggaagcccacagagttttccgctctcga
cggcacattagcgaagacctggaaaatgagcagctggacatcagggacatagacgactca
tgggaacccatatcagaggaagacccaactttagtgactgacgttctgaaccattctctg
tccggaccctcctctctggcaatgcccctctccagcactccagaattctcagatgagatc
agccttagactgtctctcgctccagacacaaacggtgaaatcccaggacccagctctgct
gtgcagagtcatctttcctctcggctacgctcctctagtatgactgatggagtcagtgat
caaactcaacctcccactccaacgcagaactcccagacccgacgaacaagagcacaaacg
gtcacaggcgttgaggacaccatgtctccatcagcctcctatgctctgaccacaccaggc
cttccgccaggctgggaggaacgcaaggacccaaaggggcgaacgtactatgtcaaccat
aataaccgtagcaccacctggactcggcccattcttcagcacactgaagatggagccagt
acctcagctgcggcagaagggggcgctacagcagccacgccccccgcttccaccccttcc
tcctccagcggccatctaagcgaaccacaagtgcgcagaccccgtagcctcagttccccc
acggtcactctctcttccccactagagggagccaataatgccccaatacggcgagccgta
aaggacacgttttccaaccctcagtccccacagccttctccctacagctcaccaaaatcc
cagcataaagcaaaccagagcttcctgccccctggatgggaaatgagaatagcgccaaat
ggacggccgttcttcattgaccacaacagcagaaccaccacatgggaagatccacgctta
aagtatcccgttcacatgaggacaaaagcatccctagaccctggcgacctcggcccactt
cctaatcttccagaggagcctgggtgggaggaacgagtgcacgcagatggaagaaccttt
tacattgaccacaacaccaaaaaaacacagtgggaagaccctcgcctccagagtcctgcc
ataactggacccgcggtgccgtattctagagaattcaagcagaagtatgactacttcaga
aagaagctaaagaaaccggcagatattccgaatcgctttgagatgaagctgcacaggaat
aacatcttcgaggagtcatacagacggatcatgtccttgaagagacccgacagcctaaag
gcccgtctgtggattgagtttgaatcggagaaaggcctggactatgggggcgtggccaga
gaatggttcttcctgctgtccaaggagatgtttaacccttattatgggctgtttgagtac
tcagccacagataactacacccttcagatcaatccaaactctggcctctgtaatgaggat
cacctctcatacttcaagttcatcggtcgggtggctggcatggctgtgtatcacggcaag
ctgttggatggtttctttattcgaccgttctataaaatgatgctgggcaaacagatcaca
ctgaatgatatggagtcagtggacagtgaatactacaactctctaaagtggattctggaa
aacgaccccacagaactggatttgcggttctgcattgatgaggacaactttggacagaca
tatcaggtggatttgaagccaagcggatcagacatggttgtaaccaatgacaacaaaaaa
gaatacatagacctggtgattcagtggcggtttgtgaacagggtgcagaaacagatgaac
gcctttttggaaggattcaccgagctcattccaatcgacttgataaagatttttgacgaa
aatgaactggagctgctgatgtgtggtctgggagatgtggatgtcaatgattggaggcag
cacaccgtttataagaatggctactgtcctaatcaccctgtgatccagtggttctggaag
gctgtgttgttaatggatgccgaaaagcggatcagacttttgcagtttgtcactggaaca
tccagagtgccaatgaacggctttgctgaactctacggttccaatgggccgcagttgttt
actatcgagcagtgggggacgcctgacaagctccctcgtgctcacacctgctttaatcgt
ctggacctcccgacatacgagtcgtttgaagacctgcgagagaagcttctgatggcggtg
gagaacgcccaaggcttcgaaggcgttgactaa
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integrated database retrieval system
