Ctenopharyngodon idella (grass carp): 127503400
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Entry
127503400 CDS
T08802
Name
(RefSeq) protein transport protein Sec16A isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127503400
Membrane trafficking [BR:
cide04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
127503400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
127503400
NCBI-ProteinID:
XP_051733077
LinkDB
All DBs
Position
21:complement(3888429..3912976)
Genome browser
AA seq
2185 aa
AA seq
DB search
MQPPPRTAPPGASGPPPSSGGPNAFRRNRPHKHGAAAAMTPAAPTTQPVTDPFAFGRQNV
LPMAGGSQAPPTNSNPLPMQGPPLPGFNSTAPPQGPPPGTAQAASPGPPPRIFTPQPVPP
GQAPSSNPPPAEPGYFNSQESMPYIAQLPNPAPPFSSSPSHPPSTAPTPPVQSQTPFQSQ
PTPPLPSHWVPDHGSRPPSVQNYFQPTNDLPSQPFQAQVPPPVPSPHTAPPLTQSQNRGQ
LAQPNVTGPSATQQQNSHFPAQNYFSQSGGPSEPWFNQSPQDQSQHACPVPYSEVPSDSG
SLSMFFGGNDVENEETLSGEGHVNGILHPLHSMTEFSGPYLNDSGNIRAGAGPCDSVENL
ECVPNQEVLPSEPPSSHAFEGGPNLETPDSAPRLARSASVSSSYSNVSHSSGHGPHSGGH
IPRRQQGVVGTFIQQESPRPPDHPPLHPSTGGYFEQIDSNPAAEASPTFPTPSPPKPVGV
FQASANSSFEPVRSHGVGVRPAEVDRARMVMEKGGRDVQPGNLEQPPDNLETIYLSERRP
SSRAQGARRPIESPATTLWAQNDTASLGVNILLAPAAPSLAATFVPTHPSEVIQPPEDGP
LDLHPAKPDPQPPSENLEIPPDSTPQASLGYASLLVTSPPVETLNQPVLIAPPSSNYSLV
SSPNLSQPLNQTSPQETAAPVHPPLQSSVTTQMPQISPPTNQPQPLFSQTPVNFSPSSTQ
GILNLAREAKDVQPSVQAARPVLSRAQSLRGDSQSLPPSVSQAPPSAAAATNHNQPSNYE
LLDFSMHQPQSTNQVTSAPAVSQKAHPAGLVNNTPGFYLQVTKDAQQGGQSDSEALPLQQ
ISNPPRPSSSHPDNDPTRTSQPPHPPPAQHQPPSQVPPTHPGAPPTGPGSAPPSSYPPQY
GNSVPQPLQEPQRPPSSLGGQSGYGAPPVMPPGPGYAGYYPGAYPEYQDGRLPYPPQYPV
DPRSQNYYQDDPYRRGDPRYGWYDGQNPGYREPERQPERPSSRTSQYSDRPNSRQGYPED
FSRSSRSAYDEYYANYYKRQYDAYGDRSRWYDPNAAYDPRYKAYYDQTYGWYYDIDGYRS
YYNQQYQNRGREGYDDPWRYYPGYDSSFDDDCRRRDPYADEFDRRSVHSEQSAHSVHSSH
SRRSSFSSRSQQSQVYRSQPDLVSAAYDTTGTTLPADYTYSQYPNPSDTANYSQIPYNSA
DNTWTAPEQPPPRPLTPEKYSVPHRCARFGPAGQLILVQPNLPSAGQPTLVEIHNMETIL
QDSPEQAELRSFPGPLVKEETHKVDVIKFAQNKAQECLRNDDLIDKDSAYLIWEFIVLLC
RQNGTVVGTDIADLLLKEHRSVWLPGKSPNEANLIDFTNEAIEHAETEEAGPISLLSDTF
MGVPENIGKETERFRELLLFGRKKDALESAMKNGLWGHALLLASKMDNRTHARVMTRFAN
SLPINDPLQTVYQLMSGRMPAAATCCGDEKWGDWRPHLAMVLSNLTHTLDLDTRTISTMG
DTLASKGLVDAAHFCYLMAQVGFGVYTKKSTKMVLIGSNHSMPFLKFCSSEAIQRTESYE
YAQSLGSQPLSLPNFQVFKFVYACRLAESGLCAQAFHYCEVISRTLLNLPEYYSPVFISQ
LIQMSLRLRFFDPQLKERPEQELFIEPDWLLHLRQLDGQIKDGVIAFRADRSTPQLYHCS
TPSSEDQCSPPDPSTMTPDPHNPLMTSLVPPAGIQLMPPAPPTILQDGAVPLQQAPPPGE
SVPFYPGPPQQNFVAAYQPETHEQYTPMPQQMHPQMPPQMPQQMPQQMPPQMPQQMPPQM
PTYNPTEMPPQTQSQMPPGMPHQMPPPMPGAERGSTPSSPQQFPQSSLTFSGPPPQGKDF
YDEMARMGPGRRSRTTSQSSSIHMTSGRRSRTISESSNHSGRERSSSLANQGSPPIPEAP
PQDEPKKSKKDSPKKGASGSGWLNWLYPKRKNEAHLPDDKNKTIVWDEKKQKWVNLDEPE
EESKPPPPPPTSFPKAPMGGPGMGPPGAGGPAAGPPVNVFSRRAGTKSRYVDVLNPGRGA
SKPAAAVPPPADLFAPLAPMAMPANLFTPAAALDEQQPMEGSVPDASGENTQQTSATVPQ
MFNPNALPPGPEGTQSGELSRSSSMSSLSREVSQHLNQVPAQPPAQGAPPAGGVTFYNPS
QFAQSVPTSRARPGRLGQRGYPTVK
NT seq
6558 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctcctcctcggacagcccctcctggagctagtggacctccgccttcctccggt
ggccccaatgccttcagaagaaacagacctcacaaacatggggctgctgctgctatgaca
ccggctgctccaaccacccagccagtgactgatccttttgccttcgggagacaaaatgtt
ttgcccatggcaggaggcagccaagctccacccacaaacagcaacccacttcctatgcaa
ggccctcccctgccagggttcaactcaacggctccaccacaagggccaccaccaggaaca
gcacaggcagcctctcctggcccaccaccaagaatttttacaccacaacctgttccccca
ggccaggcaccaagctccaaccctcctcctgctgaaccaggatactttaattctcaagaa
tcaatgccctatattgcacagttgcctaaccctgctcctcctttcagttctagtccatca
catccaccctccactgctcccacacctccggttcaatcccagactccttttcaatcccag
ccaacacctcccctaccttctcactgggttcctgaccacggaagccgtccaccttccgtt
caaaactactttcagccaaccaatgatctcccatctcagcctttccaagctcaagttcca
ccccctgtgccctctccccacacagccccacctttgacacaatctcagaatcgaggtcag
ttagctcaaccaaatgtgactgggcccagtgcaactcagcaacagaactcccacttccct
gctcagaattatttcagtcagtcaggtggtccctcagagccatggttcaatcagagcccc
caggatcagtctcagcatgcctgccctgtcccctattctgaagtccccagtgactccgga
tctctctcaatgttcttcgggggaaatgatgttgaaaatgaagaaacactgtcaggggag
gggcatgtaaatggaattcttcaccctctccattcgatgactgagttctctggtccatat
ttgaatgacagcggtaacattcgagctggggcagggccatgtgattcagtggagaatcta
gaatgtgttccaaaccaggaagtgctgcctagtgagccaccgtcaagccatgcctttgaa
ggggggcctaacttggagacacctgactctgctcctcgtcttgcccgctctgcaagtgtt
tcatccagctacagtaacgtcagtcacagcagtggacacggtcctcacagcggtggccac
atccctcgacgacagcaaggtgtagtgggaacgtttatccaacaggagagtccccgccca
ccagatcaccctcctttgcatccctccactggtggatactttgaacagatagactccaat
ccagctgcagaggcaagtcctactttcccaactcctagcccacctaaaccagttggtgtg
tttcaggcaagtgcgaattcctcctttgagcctgtccgctcacatggtgtaggagttcga
cctgccgaggttgatcgtgcacgtatggtaatggaaaagggtggacgtgatgtgcaacct
ggcaacttagaacaacccccagacaacttggagaccatttacttatcggaacggcgaccc
tcatctcgagctcagggagcacgacgccccattgagagtcccgctactacactctgggct
caaaatgacactgccagtctaggtgttaacatactgttagcccctgcagcaccctctttg
gctgcgacatttgttccaacacatccatctgaagtcatccagccaccagaggatggccct
cttgatttacatccagctaagccagatccacaacctccttctgaaaacctagagattccg
ccagactccacgcctcaggcaagtttgggatatgcctccttgctagtgacctcgcctccc
gtagagaccctgaaccagcccgtgttgattgcgccaccttcctctaattacagtttggtt
tcctctccaaacctctcacaacctttaaatcagacaagtcctcaagagacagcagcacct
gttcacccaccccttcagtcttctgtgaccactcaaatgcctcagatttctcctccaaca
aatcaaccacagcctcttttttctcagacaccagtaaacttcagcccttcttccactcaa
ggcatcttgaatctagcccgagaggccaaagatgttcagccctctgttcaagcagctcga
cccgttctctcaagggcccagtctcttagaggtgatagccaatcacttccgccttctgtt
tctcaagctccgccttctgctgccgctgccaccaatcacaatcaaccttcaaattatgag
ctgcttgatttttctatgcatcaaccacagtccacaaatcaagtcacatcagcccctgcc
gtctctcaaaaagcccatcctgcgggcttggtgaataacacacctggcttttacctgcaa
gtcaccaaagatgcacagcagggtgggcagtctgacagtgaggctctgccccttcagcag
atctctaaccccccacgaccctcaagcagccatcctgacaatgatccaactcgtacctcc
caacctccccatccaccaccagctcaacaccagcctccttcacaggtccctccaactcat
cctggtgcccctcctactggacctggatctgccccaccttcttcatacccaccccaatat
gggaactctgtcccccagccacttcaagaaccccaaagacctccttcatctctaggtggt
cagtcaggttatggggctcctcctgtgatgccccctggcccaggctacgcagggtactac
ccaggagcctaccctgagtaccaggatggaagactgccatacccaccccagtaccctgtg
gatcccagatctcaaaactactatcaggatgatccctaccgtagaggagatcctcgatat
ggctggtatgatggtcaaaatcctggctaccgggagcctgagcgtcaaccagagaggccg
agttctagaaccagccaatactcggacagacccaactccagacaggggtatccagaagac
ttttctagatccagccgtagtgcctatgacgaatactatgcaaactactataaaaggcag
tatgatgcctatggagataggagcaggtggtatgatccaaatgctgcttatgatccacgc
tacaaagcctactatgatcagacatatggctggtactatgacattgatggttacagaagt
tactacaaccaacaatatcaaaacaggggacgagagggatatgatgatccatggcggtat
taccctggttatgactctagctttgatgatgactgccgccggcgcgacccatacgctgac
gaatttgaccgccgttcagttcacagtgaacaatcagcgcacagtgtacattcatcacac
agtcgacgcagtagcttcagttcacggtcacagcagagtcaggtgtacaggagtcaacca
gacttggtcagtgccgcctatgataccactgggaccactcttccagcggattacacctac
agccagtatcctaacccttcagatactgcaaattacagtcagattccttacaattctgct
gacaacacctggactgccccagaacagcctcctcccaggccattgaccccagagaagtat
tctgttcctcatcgttgtgctcggtttggtccggctggtcagctgatccttgtccaaccc
aacctgccctctgctggtcagcccacacttgtggaaatccacaacatggagacgattctg
caggactctccagagcaggcagaattgcgttcattccctggcccgcttgtcaaagaggag
actcataaggtggatgtcataaagtttgctcagaacaaagcccaagagtgtttgcgaaac
gatgacctcatcgacaaagactccgcctacctcatctgggagttcattgtgctgctgtgt
cgccagaatgggacggtagtgggaacagacatcgctgacctgttgctaaaggaacatcgc
tctgtttggctgccgggaaaatcacccaatgaggctaatctcatcgacttcactaatgag
gcaattgagcatgccgagacggaagaggcggggccaatctccctcctatcagacactttc
atgggcgtgcctgagaatatcggcaaggagacggagcgcttcagagaactgctactgttc
ggtcgcaagaaggacgctctggagtctgctatgaagaatggcctgtggggtcacgccctg
ttactggctagtaagatggacaacagaacacacgcccgtgtcatgaccaggtttgccaac
agcctgcctatcaatgaccctcttcagacggtgtaccagctcatgtcaggacgaatgccg
gctgctgctacttgttgcggagatgagaaatggggcgattggcgccctcatctggccatg
gtgctgtccaacctcacacacactctggatcttgacacccgcaccatttcgaccatgggg
gacacattagcatctaaaggtctagtggatgcagctcatttctgttacctgatggctcag
gtgggctttggtgtttataccaagaaaagcaccaagatggtcctcatcggctccaatcac
agcatgccgtttttgaagttctgctcttcagaggcgattcaacggacagaatcgtacgag
tacgctcagtctcttggctctcagcctctctctctgcccaacttccaggtgttcaaattc
gtctacgcatgtcgactggcggagtcaggactctgtgctcaagccttccattactgtgag
gtcatttcacgcactttgttgaatctccctgagtactactcgcctgtgttcatcagtcag
ctcatccagatgtctctgaggttgaggttttttgaccctcagctgaaggagaggccagag
caggagttgtttatagagcctgattggttactgcatctcagacagctggatggacagatc
aaggacggtgtgatcgctttccgtgcggatcgcagcaccccacagctttatcactgcagc
acgcccagttcagaagaccagtgcagcccacctgacccctcaactatgacccctgatccc
cacaatcctctcatgacctcccttgtgcctcccgctggtattcaactcatgcccccagcc
cctcccactattcttcaggatggggcggtccctctgcagcaggccccgcctccaggtgaa
agtgttccattctacccagggccgccacagcaaaactttgtggcagcgtaccaacccgaa
acgcatgagcagtacacacccatgccccagcaaatgcacccacaaatgcccccacaaatg
ccccagcaaatgccccagcaaatgcctccacaaatgccccagcaaatgcccccacaaatg
ccaacgtacaaccctacagaaatgcctccacagacacaatctcagatgcccccaggaatg
ccacatcagatgcccccaccaatgcctggggctgaacgtggctccaccccttcctctcct
cagcagttccctcagtcgtctttgacgttcagtggcccccctccacaagggaaggacttt
tatgatgaaatggcacgcatgggtccaggcagaagatcaagaaccacttcacagtcatca
tcaatacacatgacatcaggtcgtcggtctcgcacgatctcagaatcgtccaatcattct
gggcgggagcgcagcagttcgctagccaatcagggttctccacctatcccagaggctcca
ccacaggacgaacccaagaagagcaagaaagactctcccaaaaaaggagcaagtggcagc
ggctggctgaactggctgtatccaaagcggaagaatgaagctcatctcccagacgacaag
aacaaaactattgtttgggatgaaaagaagcagaaatgggtaaatctggatgagccagag
gaagagagcaaaccccctcctcctccacctacaagcttccccaaagctccaatgggcggc
ccagggatggggccaccaggagcagggggtccagcagcagggccacctgtgaatgtgttc
tccaggagagccggcactaagagccgttatgtggacgtgttgaatcctggtcgtggagca
tctaaacccgccgctgctgtaccaccccctgctgacctgtttgctcctcttgcgcccatg
gccatgccagccaacctgtttacaccagctgcagccctagatgagcagcagccgatggag
ggaagcgttccagacgccagtggtgaaaacacacagcagacgagtgccacagtgccacag
atgtttaatccgaatgctttgcctcccggcccggagggaacccagtctggagagctgtca
cgttctagctcaatgagttctctatctcgagaagtgagtcagcatttaaatcaggttccc
gctcagccgccagcgcaaggagctccacctgcaggaggcgtgacattttataacccctcc
cagtttgcacagtctgttcccaccagccgtgctcgacctggtcgtttgggacagagagga
taccccacagtgaagtaa
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integrated database retrieval system
