KEGG   Ctenopharyngodon idella (grass carp): 127503468
Entry
127503468         CDS       T08802                                 
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1b isoform X1
  KO
K11648  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03082  ATP-dependent chromatin remodeling
cide03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    127503468
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    127503468
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:cide01009]
    127503468
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:cide03021]
    127503468
   03036 Chromosome and associated proteins [BR:cide03036]
    127503468
Protein phosphatases and associated proteins [BR:cide01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     127503468
Transcription machinery [BR:cide03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     127503468
    SWI/SNF complex
     127503468
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    127503468
   PBAF complex
    127503468
   SWI/SNF complex
    127503468
SSDB
Motif
Pfam: SNF5 INI1_DNA-bd DUF1679
Other DBs
NCBI-GeneID: 127503468
NCBI-ProteinID: XP_051733312
LinkDB
Position
21:9858249..9870181
AA seq 373 aa
MALSKTFGQKPIKFQLEQDGDFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLASVEERKKI
VASSHDHGYTTLATSVTLLKASECEEIFEGNDEKYKAVSISTEPPAYLREQKAKRNSQWV
PTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQAEVLVPIRLD
MEIDGQKLRDAFTWNMNEKLMTPEMFAEILCDDLDLNPLTFVPAIASAIRQQIESYPTDS
ILDEQTDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPETFALKLCSELGLGGEFVTTIA
YSIRGQLSWHQRTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRDQDRNT
RRMRRLANTAPAW
NT seq 1122 nt   +upstreamnt  +downstreamnt
atggcgttgagtaaaacatttggacaaaaaccaataaaatttcaactcgagcaagatggg
gatttttacatgataggttcagaggttggcaattacctgcgtatgttcagaggctctctg
tataagcggtacccatcactatggagacgccttgcatccgtggaggagcggaagaagatt
gtagcatcatcacacgatcatggttacacaactttagccaccagtgtgaccctgctgaag
gcgtctgagtgtgaggagatcttcgaggggaatgatgagaagtacaaggcagtgtccatc
agcacagagcctccggcgtatctcagggagcagaaggcgaagaggaacagtcagtgggtg
cccaccctacccaacagctcccaccacctggatgcagtgccttgttccaccactatcaac
agaaaccgaatgggacgtgacaagaaaaggacctttccattatgtttcgatgaccatgac
cctgcagtcatccacgaaaatgcatcccaggcagaggtcctggtgcctatccgcctggac
atggagattgatgggcagaagctcagagatgccttcacctggaacatgaacgagaaactt
atgactccagagatgtttgctgagatcctgtgtgacgacctagacctgaatcctctcacc
ttcgtccctgccatcgcctcagccattagacagcagatcgagtcctaccctaccgacagc
attctggatgagcagacagaccagagggtcatcattaagctaaacattcatgtggggaac
atctctctggtggaccagttcgaatgggacatgtcagagaaggagaactcgccagaaacg
tttgctttgaagctctgctctgagttgggcctcggaggagagttcgtcaccaccatcgcc
tacagcatccgcggacagctcagctggcaccagaggacgtacgccttcagtgagaaccca
ttaccaacggtggagattgccattcggaacacaggtgatgccgaccagtggtgccctctg
ctggagaccctgacagacgcagagatggagaagaaaatcagagaccaggacagaaacaca
aggcgtatgcgacgacttgccaacaccgcccctgcctggtaa

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