Ctenopharyngodon idella (grass carp): 127503480
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Entry
127503480 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127503480
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127503480
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
127503480
NCBI-ProteinID:
XP_051733379
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All DBs
Position
1:1812044..1918558
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AA seq
1092 aa
AA seq
DB search
MSSPSAGSSGNASGDETKTSDPRISRRKRQRSESPEPSAVSLKSYRSMEPPLQLSDEPVS
SDPLISRRKRSESPEPSAVSLKSYRSMEPPLQLSDEPVSSDPLRREIYELRSVPSSISHY
QTHIRQNKNEAVLQTHTLETEDLQRIKDQHKISMKNKYERLFEGTKLQENETLLNRIYTQ
LYIIEGEREGVNEEHEVLQMEKTARTQHSQDTPIDYNDIFKASPEPGCEEKDQIKTVLTK
GIAGIGKSVSVQKFILDWAEGKANQDVDFMFVLPFRELNLIRDHRYSLHRLLLDFHPELQ
DLDSKIYEESKVVFIFDGLDESRMTLMFSDAQKVSDVTETSSVGVLLSNLTKGELLPSAL
IWITSRPAAANQIPSKYINRLTEIQGFNEPQKEEYFRKRIGDEHQASRIFSHIRRARSLH
IMCHIPIFCWISSTVLQKLLKEDLSAEIPQTLTEMYIHFLLIQINIRNQKYEERDPEKLL
QSNREVIVKLAEVAFKQLMKGNVMFYEEDLRESGIDVTDASVYSGICTEIFKEESVIHQR
KIYSFIHLSVQEFLAAFYAFYHYIIKNVDTLQFSDVMHNLHKDAVDKALESKNGHLDLFL
RFLLGVSLESNHRLLKDLLTHTENSSESIRRTTQYIKEKIKDGHGLSTERSINLFLCLLE
VKDQTLSREIKEFVKSDKHSEKKLSRAHCSTIAYMLQMSEEVLDELDLKKYNTSDEGRRR
LIPAVINCRKALLADCNLTGRHCEIVSSALQSSNSVLRELDLSNNDLQDSGVKLLSDGLK
SLSCQLEILRLSGCMVTEEGCGYLSSALSSNPSHLRELDLSYNHPGQSGVQLRNDKLKDP
NFSLQILNLDHADPVRITPGLRKYACDLTLDPNTAHTQLILSDENRRAKHIKDPQSCPDH
PERFEHHEQVLCRESLNERCYWEAEWTGWAYIAVTYKGINRKGGSDSWFGYNDKSWSLYC
TENRYSAWHNNKKTDIPAPSPQSNRVGVYLDWSAGSLSYYSVSDTHTLTHIHTFNTKFTE
PLYAGFRVFESSLSLCQIKQSTLSRGVSTDSAGSAAALGPCSREVRSTCKRAPDDEVTLQ
DTGDTHISNEMR
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgagttccccatctgctggatcaagcggcaatgcatccggtgatgaaaccaagacgtct
gatcccagaatcagcaggaggaagagacagagatcagagtctccagaacccagcgctgtg
tctctaaagagttacagatccatggaaccaccccttcaattaagtgatgaaccagtgtct
tctgatcctctaatcagcaggaggaagagatcagagtctccagaacccagcgctgtgtct
ctaaagagttacagatccatggaaccaccccttcaattaagtgatgaaccagtgtcttct
gatcctctcaggagggagatatatgagctgagatctgtgccatcctctatatcccactat
cagactcacatcaggcaaaacaaaaatgaagcagtcctgcagacacacacactggagact
gaagacctgcagagaatcaaagaccagcacaaaatcagcatgaagaacaagtatgagaga
ttatttgagggaaccaaactccaagagaatgaaaccctcctgaacaggatctacacccag
ctctacatcatagagggagagagagaaggagtgaatgaagaacatgaggttttacagatg
gagaaaacagccagaacacaacactcacaagacactccaattgactataatgacatcttt
aaagcctcacctgaaccaggatgtgaggagaaagaccaaatcaagactgttcttactaaa
ggcatcgctggaattggaaaaagcgtctctgtgcagaagttcattctggactgggccgag
ggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttg
atccgagatcatcggtacagtcttcacagacttctgctggactttcatcctgaacttcaa
gatttggactcaaagatttatgaggagagtaaagttgtgttcatctttgatggtctggat
gaaagcagaatgacactgatgttttcagatgctcagaaagtttctgatgtgactgagact
tcatcagtgggtgtgttgttgtcaaacctcacgaaaggagagctgcttccctctgctctc
atctggatcacctccagaccagcagcagccaatcagatcccctccaaatacatcaaccgt
ctgacagaaattcagggattcaatgagcctcagaaggaggaatatttcaggaagagaatc
ggtgatgagcatcaagccagcagaatcttctcacacatcagaagagcaagaagccttcac
atcatgtgccacatacccatcttctgctggatctcatccactgtgcttcaaaagctcctg
aaagaagatctgagtgcagaaatccctcaaactctgactgaaatgtatatccacttcttg
ctgattcagatcaacataaggaatcagaagtatgaagagagagatccagagaaactgctg
cagtccaacagagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaag
ggcaatgtgatgttctatgaggaggacctgagagagagcggcatagatgtcactgacgcc
tcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagagg
aaaatctacagcttcattcatctgagcgtgcaggagtttctcgctgctttctatgcattt
tatcattatataatcaaaaatgttgacacattgcagttttctgatgtgatgcataatctg
cataaggatgcagtagataaagcccttgaaagtaagaatggacacctggatctgttcctg
cggttcctgctgggcgtctcactggagtccaatcacagactcttaaaagatctactgaca
cacacagagaacagctcagagagcatcaggagaaccacacagtacattaaagagaagatc
aaagatggacatggactctccactgaaagatcaatcaatctgttcctctgtctgctggaa
gtcaaagatcagactctgtccagagagattaaggagtttgtgaaatcagacaaacactca
gagaagaaactctctcgtgctcactgctcaacaattgcctacatgcttcagatgtcagag
gaggtgctggatgagctggatctcaagaaatacaacacatcagatgaggggagaagaaga
ctgataccagccgtgatcaactgtaggaaagcccttcttgctgactgtaatctcactggt
cgacattgtgaaattgtgtcatcagctctacaatcctcaaactctgtcctgagagagctg
gacctgagtaacaatgacctgcaagattcaggagtaaagctactttctgatggactgaag
agtctaagctgtcagctggagatactgaggttgtctggctgtatggtgacagaggaaggc
tgtggttatctgtcttcagctctgagttcaaacccctcacacctgagagagctggatctg
agctacaatcacccaggacaatcaggagtccagctgcgcaatgacaaattgaaggatcca
aacttctcactgcagattctcaatttggatcatgcagaccctgttcgaatcacaccagga
ctgagaaaatatgcctgtgatctcacactggatccaaacacagcacacactcaactcatc
ctgtcagatgaaaacagaagggcgaaacacatcaaagatccacagtcatgtcctgatcat
ccagagagatttgagcaccatgagcaggttttgtgtcgagagagtctgaatgaacgctgt
tactgggaggctgaatggactggatgggcttatatagcagtgacatataaaggaatcaac
aggaaaggaggcagtgactcttggtttggatacaatgacaaatcctggagtctgtactgc
actgaaaacagatattctgcctggcacaataataaaaaaactgacataccagccccttca
ccgcaatctaatagagtaggagtgtatctggactggtcagccggctctctgtcgtactac
agtgtctctgacacacacacactcacacacatacacacatttaacaccaaattcactgaa
cccctctatgctggattcagggtgtttgaatcctcattgtctctgtgtcagattaaacaa
tctactttgagcaggggtgtaagtacagacagtgcaggcagtgcagccgcactgggcccg
tgcagcagggaggtccgcagcacatgcaagcgggcccctgatgacgaagtgactctgcag
gatactggggatactcacatttcaaatgaaatgcgctag
DBGET
integrated database retrieval system
