Ctenopharyngodon idella (grass carp): 127503516
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Entry
127503516 CDS
T08802
Name
(RefSeq) RAB39B, member RAS oncogene family a
KO
K07925
Ras-related protein Rab-39B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127503516
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127503516
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
cide04031
]
127503516
Membrane trafficking [BR:
cide04131
]
Autophagy
Other autophagy associated proteins
Rab GTPases
127503516
GTP-binding proteins [BR:
cide04031
]
Small (monomeric) G-proteins
Rab Family
Rab39/42 [OT]
127503516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
Gtr1_RagA
GTP_EFTU
AAA_22
TniB
Motif
Other DBs
NCBI-GeneID:
127503516
NCBI-ProteinID:
XP_051733411
LinkDB
All DBs
Position
21:complement(18356122..18361230)
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AA seq
213 aa
AA seq
DB search
MEAIWLYQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKL
QIWDTAGQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEEARSHVQPHSIVFLL
VGHKCDLEQQRQVSQQEAEKLAAAYGMRYVETSARDAINVERAFTELTRDIFELVKCGDI
TIQEGWEGVKSGFVPNVVHSSEEVTKSDRRCLC
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggaagctatatggctgtaccagtttcggctgattgtcattggcgactctacggtgggg
aagtcttgtttgatcagacgcttcacagaaggacgttttgcacaggtgtctgatcctact
gttggcgtagacttcttctcccgtctggtggagattgaaccaggcaaacgcatcaagctt
cagatctgggacacggcaggccaagagagattcagatctatcacaagggcttattatcgt
aattcagtgggtggccttttgcttttcgacatcaccaaccggcgctccttccaaaatgtc
cacgagtggctggaggaagcgcgcagtcacgtgcagcctcacagcatcgtcttcttactg
gtcggccacaagtgtgacctggagcagcagcggcaggtgagccagcaggaggcagagaaa
ctggcagccgcttacggcatgcgctacgtggagacctcggcccgtgatgccataaacgta
gagagggctttcacggagctgacgcgcgacatcttcgagctggtcaaatgtggtgacatc
accatccaggagggctgggagggtgtcaagagcggtttcgtgcccaacgtggtgcattca
tccgaggaggtgaccaagagtgaccgccgctgcctctgttga
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