Ctenopharyngodon idella (grass carp): 127503810
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Entry
127503810 CDS
T08802
Name
(RefSeq) PDZ and LIM domain protein 4 isoform X1
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127503810
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127503810
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127503810
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
SNAPC3
Motif
Other DBs
NCBI-GeneID:
127503810
NCBI-ProteinID:
XP_051733884
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All DBs
Position
21:27160026..27204663
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AA seq
349 aa
AA seq
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MSHTVTLTGPSPWGFRLVGGRDFSTPLTISRITPASKAALSDLCPGDTILAINGESTETM
THMEAQNRIKACTDQLVLSISRSGKVWSPTGIEENKTSPYTGILESESQTFRPISSGYSP
TPKSPSPKSPITGGVPYNNGNSRPMYNNPAGLYSHNNGNGALPKQMAGLSLGSPHSFSPE
PPLNSSGNPNGFDTQSDVYRMLQDYEEPVSAPKQSGSFKYLQGILEAEDGGVSPVDRHGV
RGLRSPVKSPVPKLGSPITAPLAPIAGLQKLPQCTRCGNGIVGTIVKARDKLYHPDCFMC
DDCGLNLKQRGYFFIDENLYCETHAKARVQPPEGYDVVAVYPNSKVELV
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacactgtgactctcaccggtccctcgccgtggggttttcgtctggtgggtgga
cgggacttcagcacaccgctcaccatttccagaataacacctgcgagtaaagcagcgctg
agcgacctgtgccctggagacaccatcctagccatcaatggagaaagtacagagaccatg
acacacatggaggctcagaaccgcattaaagcctgcacagatcagcttgtgttgtccatc
agcagatctggaaaggtttggtctccaactggaatagaagaaaacaagacaagtccatac
accggaatactggagtctgagtcacagaccttccgaccaatcagcagtggctatagcccc
actcccaagagtccatcccccaagagtcccattacaggcggtgtgccgtacaataatggc
aactcgagacctatgtacaacaatccagccggactgtattcacacaataacggcaatggt
gccctgcccaagcagatggcaggcctcagcctgggctctcctcacagtttcagccctgaa
ccaccactgaactcatcaggcaaccccaatggcttcgacacacagtcagacgtctacagg
atgcttcaggactacgaggaacctgtgtcagctcccaaacaatctggctcctttaaatac
ctgcagggaatcctggaagctgaggatgggggggtctcaccggtggacagacatggggta
agaggcttgcgttcccctgtcaaatcccccgtgccaaagctgggcagccccataacggct
cctctggcgcccatcgccggcttacagaagctgcctcagtgcacacgctgcggaaatggc
attgtgggaaccattgtgaaggccagagacaagctctatcatcccgactgcttcatgtgt
gatgactgtgggctgaatctaaagcagagaggatatttcttcatcgatgagaatctgtat
tgcgagacccacgccaaggctcgtgtgcagcctcctgagggctatgacgtggtggccgtg
taccccaactccaaagtggaactggtctaa
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