Ctenopharyngodon idella (grass carp): 127503841
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Entry
127503841 CDS
T08802
Name
(RefSeq) transient receptor potential cation channel subfamily C member 2b
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127503841
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127503841
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Motif
Other DBs
NCBI-GeneID:
127503841
NCBI-ProteinID:
XP_051733961
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Position
21:18445907..18461503
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AA seq
1042 aa
AA seq
DB search
MENLTPEQWREIVNKKFRFPPELLGAIREGNINMVSSLLKTGDGIIRQLDDSEDRQWREA
LNLSIRLGNEDTMDTLLQGVKFDFRQIHEALLVAVDTNQPRVVKRLLDRLDLEKGNKMDV
RSFSMAIFDHSIDDSQFAPGVTPLTLACQKDLYEIVTMLNQKGHEIPWPHKISCACLECT
NGRQYDLLKFSLSRINTYRGIASRAYLSITAEDAMLSAFRLSRDLRKLSKKEPEFKPQYL
SLEQVCQEFAVELLGMCRNQSEVTTILNSCGNLDEGSEDELDQQAFEEGIPNLARLRLAV
NYNQKQFVAHPICQQVLSSIWCGSLSGWRGSRTAWKLLVSLGIFLTMPILCLIYWIAPKS
KLGKILKIPVIKFLLHSASYMWFLITLLGESIAMEVYRDSFASRQHTILHSSFHMVWVVG
FFWFECKEVWIEGLRSYFLDWWNCLDVMVLSMYLASFALRVVIMLKVHFLCQLPDNQDEC
VYFNDTLRDEWHQEDPQFIAEVLFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMM
RFMFILVIIGTAFLCGINNVYVPFMISPNLGRLNETFSFLFWTMFGMADQTYVDMPEFVL
AEFVGRILYGIYTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLT
MPVPFNIIPSPKAFFYLLRGIVRRICCCCFNCNSAPDYPPLTSMDDMGSGENRIPYRQQV
IRALVQRYIESARREFEEAKRKDVGNRITELSKVIGQLHAEMKQIHTNMFDYSDNTKADP
SGGSSFLGKYILGAKNNFKGFNNNERKTAPFHEPVHHEQPAETVEETVNVQESQTTDTEA
DRKSNEEQSSEGETDNAVDDMNGTEERGKETGINDVIEISMEEGAEKNTENTSETVIDIE
SNSDIESEASGKRQDEVMTEKAEDNREELNTDEPTGGSALNEAETEENGEVEENNGTIED
INEDVVEVVSEGSSSEGIKFDLSQTNLVSFLAKRIEEKLEKKVLKETNFTFSGNQATSPT
GSDDSQDTGFGSQEFEPSTSSP
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggaaaacctcacgccagaacaatggcgcgagattgtgaacaagaagtttcgcttccct
ccggagctcctcggcgccatccgagaggggaacataaacatggtttcttcgttgctgaag
acaggtgacggtatcatccgtcagctggacgactctgaggacaggcaatggagagaagcg
ctaaacttgtccatccgactgggtaatgaggacaccatggacacccttctccaaggggtc
aagtttgacttccggcagattcacgaagctcttctggtggccgtggacaccaaccagcct
cgtgtggtcaagcgcctcctggaccggctggatctagagaagggaaacaagatggatgtg
cgctctttctctatggccatttttgaccactccattgatgattcccagtttgcacctgga
gtgacaccattgacactggcctgtcagaaggatctgtatgaaattgtaacaatgctcaat
cagaaaggtcacgaaattccttggcctcataaaatctcatgcgcatgtctggagtgcacg
aatggacggcaatacgatttgctcaagttctcgttgtcccgtatcaacacctaccgaggt
attgccagccgtgcttacctgtccatcaccgcagaagatgccatgctcagtgccttccga
ctcagccgcgatctccgcaaactgtctaagaaggaacctgagtttaagcctcagtatctt
agcctcgagcaggtgtgccaggaatttgctgtggagctgcttggaatgtgccggaatcaa
agcgaggtcaccaccatcctgaacagctgtgggaatctggatgagggcagcgaggacgag
ctggaccaacaggcatttgaggagggcattccaaaccttgctcgcttgaggcttgccgtc
aactacaatcaaaaacaatttgtagcccacccgatctgccagcaggtgctctcctccatc
tggtgtgggagcctttcaggttggaggggcagcagaacggcatggaagcttctggtgtct
ttgggaatcttcttgaccatgcctatcctttgccttatctactggatcgcaccaaagtca
aagttggggaagattctaaagatcccagtgattaaattcctcctccattcagcttcttat
atgtggttcctgatcacgctactgggggaatccattgctatggaggtgtatcgggacagc
tttgcctctcgtcagcacaccatcctgcacagctccttccacatggtctgggtggttggt
tttttctggttcgagtgtaaggaggtttggattgagggcttgaggagttacttcctggac
tggtggaactgtctggacgtgatggttcttagcatgtacctggcttcatttgccctgaga
gtggtcatcatgctcaaggtccacttcctctgccagttacctgacaaccaggatgagtgt
gtctacttcaacgacactttgcgtgatgagtggcatcaggaggatccccagttcatcgct
gaggtgctgtttgcggtgaccagcatgctgagtttcactcgcttggcctacatcctgcca
gcacacgagtctctaggtaccctgcagatctccattggaaagatgattgacgacatgatg
agatttatgttcattttggtgatcattggaaccgccttcctgtgtggcatcaacaatgtc
tatgtcccatttatgatctcccctaatcttggaagattaaatgaaaccttcagcttcctc
ttctggacaatgtttggtatggccgaccagacctatgtggacatgcctgagtttgttttg
gctgagtttgttggcagaatcctttatggcatctacaccctggtcattgtcattgtgctt
ctaaacatgctcattgccatgatcaccaactcttttcagaaaattgaggatgatgctgat
gtagagtggaaattcgcccgttcaaagctctacctgagttacttcagagaaggactgact
atgcctgtccccttcaacatcatcccctctccaaaggcctttttctatcttttaagagga
attgtcagacggatctgctgctgctgcttcaactgtaactctgctccagactatcctcca
ctcacgtctatggatgacatgggctcaggggagaacaggattccctacagacagcaggtc
attcgcgctctggttcagcgctatatcgaatctgccaggagagagtttgaagaggccaag
cgcaaagacgttgggaacaggatcacagagctgagcaaagtgatcggccagctacacgct
gaaatgaagcagattcacacgaacatgtttgactactcagacaacaccaaagcagaccca
tcaggaggctcttctttcttgggaaagtacatcctcggagccaaaaacaacttcaagggc
ttcaacaacaacgagagaaagactgctccatttcatgagccagtacaccatgaacaacca
gcggagactgtagaagagactgtaaatgtgcaggagtcacagaccactgacacagaggca
gacaggaagtcaaatgaagagcaaagcagtgagggagaaacagataacgctgtggatgac
atgaatgggacagaggagagaggaaaagagacaggaattaatgatgtcattgagattagc
atggaggagggtgctgaaaagaatacagagaacacaagtgagacagtcatagatatagag
tccaattcagacattgagagtgaagccagtggaaaaagacaagatgaggtgatgacagag
aaagctgaagataatagagaggaattgaatacagatgagccgacaggaggatcagctcta
aatgaagcagagacagaggaaaacggagaagttgaggaaaataatggaacgatagaagat
ataaatgaggatgtagttgaagtggtcagtgagggaagttcaagtgagggcattaagttt
gatctgagtcagacaaacctagtgagttttttagcaaagaggatagaggaaaagctagag
aagaaagtcctaaaagagacgaatttcactttcagtggaaaccaagcaacatctccaact
ggcagcgatgactcccaagacactggttttggttctcaagaatttgaaccctcaactagt
agcccttaa
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