Ctenopharyngodon idella (grass carp): 127503895
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Entry
127503895 CDS
T08802
Name
(RefSeq) CCR4-NOT transcription complex subunit 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127503895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127503895
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
127503895
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
127503895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
127503895
NCBI-ProteinID:
XP_051734055
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All DBs
Position
21:22906369..22913538
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AA seq
285 aa
AA seq
DB search
MPAALADTSQIICEVWASNVEEEMRKIRQIIQNYNYIAMDTEFPGVVVRPIGEFRSTVDY
QYQLLRCNVDLLKIIQLGLTFMNEDGDYPPGTTTWQFNFKFNLTEDMYSQDSIDLLQNSG
LQFKKHEEEGIDTLYFAELLMTSGLVLCENVKWLSFHSGYDFGYLVKLLTDSRLPEEEHE
FFQILNLFFPAIYDVKYLMKSCKNLKGGLQEVADQLELKRIGRQHQAGSDSLLTGMAFFR
MKELFFEDNIDDAKYCGRLYGLGSGSSQNQNGISNSSQEEANNKH
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgccagccgcacttgcagataccagtcaaattatctgtgaggtctgggccagcaatgtg
gaggaggagatgaggaagatccgacagataattcaaaattacaactacatcgccatggac
acagagtttcctggtgtggtggttcgtcccattggagagttccgcagtactgttgactat
cagtaccagcttctgaggtgcaacgtggaccttttaaaaatcatccagcttggcttgacg
tttatgaatgaagatggagactacccgcctggaaccacaacatggcagttcaacttcaag
ttcaatctgacagaggacatgtactcccaggactccatagatctcctccagaactctggg
ctgcagtttaagaagcacgaggaggagggcatcgacacactctacttcgcagagctcctg
atgacatctggcctggtgctgtgtgaaaatgtcaagtggctctcgtttcacagtgggtat
gattttggttacctggtgaagctcctcacagactcccggctgccagaagaggaacacgag
ttctttcagatcttaaacctttttttcccagccatttatgatgtcaaatatctaatgaag
agctgcaaaaacctaaagggtggacttcaggaggtggcggaccagctggagctaaaaagg
atcggcaggcagcatcaggctggctcagactcgctgctcactggaatggctttcttccgc
atgaaagagctgttttttgaagacaacatcgacgatgccaagtattgtgggcggctctat
ggcctgggatccggttcctctcaaaatcagaatggaatctctaattcctcgcaggaggaa
gccaacaacaagcactga
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