Ctenopharyngodon idella (grass carp): 127503919
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Entry
127503919 CDS
T08802
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127503919
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
127503919
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
Helicases
127503919
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
PAS_11
Motif
Other DBs
NCBI-GeneID:
127503919
NCBI-ProteinID:
XP_051734100
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All DBs
Position
21:15621389..15651498
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AA seq
868 aa
AA seq
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MRVKKNKEKKNIIDDPVRNFEKWKKKYDKTKTRIKRVQKPTRKKRDWEVERENIQRLVNK
YSTINAKEAVKFSDFPLSRKTLNGLLECQYRQPTEIQRQTIGFALQGKDVLGAAKTGSGK
TLAFLIPVLECLYREQWTGMDGLGALIISPTRELAYQTFEVLRKIGRNHEFSAGLIIGGK
DLKDESEKIHRTNIIICTPGRLLQHMDENATFHASNLHMLVLDEADRILDMGFAETLNAI
VENLPKTRQTLLFSATQTRSVKDLARLSLKNPEYVWVHEQAKFSTPATLEQNYVVCELHQ
KVNMLFSFMRSHLQKKIIVFFACCKEVQYLFRVFCRLRPGISVLALHGKQQQMKRVEVYN
DFVRKTSAVLFATDIAARGLDFPAVNWVLQFDCPEDANTYIHRVGRTARYKEGGEALLVL
LPSEEKGMIEQLQEKKVPINKIQVNPEKLVSVQQKLEAFLAQEIDQKERAQRCFVSYLRS
VYLMKNKDVFDVFQLKLQEYAMSLGLAVAPRVRFLIKAQQQKSGAAQDDSGTAEHEPEDE
LESFKAKLKGRQPESQSSQSEEEDDEEEEGDDDDDDEEEETLKPAALLCGFNEEEDDDQN
DLDLLTVKRKDVFNINEESEDDEGTDANAKNKKLKETKFKDAKKILKRNLKVNTKKVFTE
EGEELQQWPPLQRTMVPDEEDDEEVSGINVEAAKERLRKEDQAFDKIEYRRKVQEKHREK
RLKEKAARREADQQQKEEKKKRTAAAAAAAAAADNDEDEDDDEEEEEEVVAYLSGADEDF
DPSTLPDPDKVCDSESSSEEDGDSSDHGGKKRSFSSDSSEDDDSDEEVQQTQVGRKKPRK
ESTVTPLDTGLSLAEDEELVLHLLGKRS
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttaaaaagaacaaagagaagaaaaacataatcgatgaccctgtaaggaatttt
gagaaatggaaaaagaagtacgataaaacgaaaacccggatcaaacgagttcaaaagccc
actaggaagaaacgcgactgggaggtggagagagaaaacatacagagactggtgaataaa
tactcgacgatcaatgccaaagaggctgtgaagttctctgattttccactctcaagaaag
actctaaacggtcttcttgagtgtcagtaccggcagcccacagagattcagaggcagact
attggctttgctttgcaaggtaaagatgttcttggtgctgcaaagacgggctctggaaag
actttggccttcctcatcccggttttggagtgcttgtatcgtgaacagtggactgggatg
gacggcctcggcgctctcatcatctctcccacccgagagctggcctatcagacctttgag
gtgttgaggaagatcggcaggaaccatgaattttctgccggccttataattggtggaaag
gatctgaaagatgaatcagagaagatccatcgcacaaatatcattatctgcaccccagga
cgtctgctgcagcacatggacgagaatgccacatttcatgcttcaaatctgcacatgctt
gtacttgatgaagccgacaggattctagacatgggttttgctgaaacactcaatgccatt
gttgaaaacctcccgaaaacacgacagacccttctcttctccgccactcagaccaggtct
gtcaaagatctggccagactgagcctgaagaacccagagtatgtgtgggtccatgagcag
gccaagttcagtactcctgcaactctggaacagaactatgtggtgtgtgagctgcaccag
aaagtcaacatgctcttctcatttatgaggagtcaccttcagaagaagatcatagtcttc
tttgcctgctgcaaagaggttcagtatctgttccgggtcttctgccggttgcgtcctggt
atctccgttcttgctttgcatgggaaacagcagcagatgaagagagtggaagtttacaat
gactttgtccgcaagacctctgcagtactatttgccacagatatcgctgccagaggactt
gacttccctgcagtgaactgggtgctgcagttcgactgtcctgaagatgcgaacacatac
attcacagagttggcagaacagccaggtataaggaaggaggtgaggcgcttctggtcctg
ttgccctcggaggaaaagggcatgattgaacagcttcaagagaaaaaagttcccattaac
aaaatccaggtgaatccagagaagttggtgtcggttcagcagaagctggaggcctttctg
gcacaggagatagaccagaaggagcgggcgcagaggtgtttcgtgtcctacctccgctca
gtctatctgatgaagaacaaagatgtctttgatgttttccagctcaaactccaagaatat
gccatgtcactgggtttggcagtggcgccacgggtccggttcctcattaaggcccagcag
caaaagagtggagcggcgcaggacgacagcggtactgcagaacacgagcctgaagatgag
ctggagagtttcaaagccaaactcaaaggacggcaacctgagtctcagtcctcacagtct
gaggaagaagacgacgaagaggaggaaggggatgatgatgatgatgatgaagaggaggag
acattaaagcctgcagctctgctatgtggctttaatgaagaggaggacgatgaccagaac
gatctggaccttctgactgtcaaacgtaaagatgtgttcaatatcaatgaagagagcgaa
gacgatgagggtacagatgctaatgccaagaataagaaactaaaagagaccaaattcaaa
gatgcaaagaaaatactgaaaagaaacttaaaggtcaacactaagaaggtcttcactgag
gagggagaggagctgcagcagtggcctccgctgcagaggaccatggtaccagatgaagag
gatgacgaagaggtgtctggcattaacgtggaagcagccaaagagcggcttcgcaaagaa
gaccaggcgtttgacaagattgagtaccgtcgtaaagtccaggagaaacacagggagaaa
agactgaaggagaaagcagctcggagggaagcggaccaacagcagaaagaggagaaaaag
aaaagaactgctgctgctgctgctgccgctgctgctgctgataatgatgaggatgaggat
gatgatgaggaggaggaggaggaggtggtagcgtatctgtcaggtgctgatgaagatttt
gaccccagcacccttcctgacccagacaaagtgtgcgactctgagtcctcctccgaggaa
gatggcgattcatcagaccacggaggcaagaagagaagtttcagcagcgacagcagtgag
gatgatgatagtgatgaagaagtacagcagacacaggtgggcaggaagaagcccaggaag
gagtccacagtaactcctctggacactggcctctcgctggccgaagacgaggagcttgtg
ttgcatttactgggcaaacgcagctag
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