Ctenopharyngodon idella (grass carp): 127503930
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Entry
127503930 CDS
T08802
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 6 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide00061
Fatty acid biosynthesis
cide00071
Fatty acid degradation
cide01100
Metabolic pathways
cide01212
Fatty acid metabolism
cide03320
PPAR signaling pathway
cide04146
Peroxisome
cide04216
Ferroptosis
cide04920
Adipocytokine signaling pathway
Module
cide_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
127503930
00071 Fatty acid degradation
127503930
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127503930
09143 Cell growth and death
04216 Ferroptosis
127503930
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
127503930
03320 PPAR signaling pathway
127503930
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cide01004
]
127503930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cide04147
]
127503930
Enzymes [BR:
cide01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
127503930
Lipid biosynthesis proteins [BR:
cide01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
127503930
Exosome [BR:
cide04147
]
Exosomal proteins
Exosomal proteins of breast milk
127503930
Exosomal proteins of breast cancer cells
127503930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
127503930
NCBI-ProteinID:
XP_051734122
LinkDB
All DBs
Position
21:30084425..30171670
Genome browser
AA seq
722 aa
AA seq
DB search
MLAFALVAGSVWVVLELSSTLMEKMQSRDLLLGLQLPELEDLGQFIRSLPTSTLLGLGAL
TAVLAYWITTRPRSIVPPCDLRHQSQEVQMEDGARRSMMGSRSELLSYYHEDAKTMYEVF
QRGLHITGDGPFLGSRLPNQPYTWLSYKEVSSRAELLGSGLLSQGCQPNTDQFIGVFAQN
RPEWIISELACYTYSMVVVPLYDTLGPDAIRYIIKTAEISTVICDKPEKATVLLENVQRR
ETPGLKMIILMDAFDAQLVEEGQKCGVHIQALKDVEALGRDHHRKPVPPAPDDLSIVCFT
SGTTGDPKGVMLTHGNVVADFAGFLKVTDKVIFPNQDDVLISFLPLAHMFERLIESVVIC
HGGRIGFFQGDIRLLPDDMKALRPTIFPVVPRLLNRMYDKIFSQANNSVKRWLLNFAAKR
KGAEVSRGVIRSDSIWDKIFFHKIQASLGGRLRMIITGAAPASPSVLGFLRAALGCQVYE
AYGQTECTAGCTFTTPGDWTSGHVGAPLPCNLIKLVDVAEKNYFAAKGEGEVCVKGPNVF
KGYLKDPVRTAETLDADGWLHTGDIGKWLPNGTLKIIDRKKHIFKLAQGEYISPEKIENI
YIRSEPVCQLYVHGDSLQSCLVGIIVPDPEVFPSWAQKKGFEGCFDELCENKDLKKAILD
DMVRLGKASGLHSFEQVKDIYIHKELFSIQNGLLTPTLKAKRPELKEYFKMEIEQLYSNI
SM
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgctcgccttcgctttagttgctggatctgtctgggttgtactagagctcagctccact
cttatggagaagatgcagtctcgggatctgctgctggggcttcagctgccggagctggag
gatctgggtcagttcatccgctctctacccacctccacactgctgggtctgggcgctctc
accgcggtgctggcctactggatcaccacacgcccgcgatccatcgtcccgccctgcgac
ctccggcaccagtcacaggaagtacagatggaagacggcgctcgaaggtccatgatgggc
agcaggtccgagctgctctcttactaccacgaggacgccaagaccatgtacgaggtgttt
cagcgaggtctgcacatcaccggtgatggaccgtttctaggctccagactgcccaatcaa
ccctacacatggctgtcttacaaagaggtgtccagcagggcggagctcttgggctctggt
ttgttgtctcagggatgtcagcccaatacggatcagttcatcggggtgtttgcgcagaac
aggcctgagtggatcatttctgagctggcgtgctacacgtactcaatggtggtggtgccg
ctctacgacactctgggacccgacgccatccgctacatcatcaaaacagctgaaatctcc
acagtaatctgtgataaaccagagaaagccacggtgcttctggaaaacgttcagagaaga
gagacgcccggtctgaagatgatcatcctcatggatgcgtttgatgctcagctggtagaa
gaaggccagaagtgtggtgttcacatccaggcgcttaaagatgtggaggctctgggtcga
gatcaccacaggaaaccagtgccgccggcaccggatgacctgtccatcgtctgcttcacc
agtggaaccacaggagatccaaagggagtgatgctgacccacggcaacgttgttgccgac
ttcgctggctttttgaaagtgacagataaagtcatctttccaaaccaagacgacgtgctc
atttccttcctgcctcttgctcacatgttcgagaggctgattgagtctgtggtgatctgc
catggcgggaggattggctttttccaaggcgatatccgccttcttcctgatgacatgaag
gctctcaggcccacgatatttccagtggtgccgcgtctcctgaaccgcatgtatgacaag
atcttcagtcaggccaacaactccgtgaagcgctggctgctgaacttcgcggccaaaaga
aaaggagcggaggtgagccgtggcgttatccgcagcgacagcatatgggacaagatcttc
ttccataagatccaggccagtctgggtgggaggctgcggatgatcatcaccggagcggct
cccgcgtccccgtccgtcctgggcttcctgagagcggcactgggctgtcaggtgtacgag
gcgtacggtcagaccgagtgcaccgccggatgcaccttcaccacccctggagactggacg
tccggtcatgtaggagctccgctgccgtgtaacctcattaaactggtggatgtggctgag
aagaactactttgctgctaaaggagagggcgaggtttgtgtgaaaggcccaaacgtcttc
aagggttatctgaaagaccccgtgaggaccgctgagacgctggatgcggacggatggctt
cacactggagacattgggaaatggctgccgaatggcacactgaagatcatcgacaggaag
aagcacatctttaagttagctcaaggtgaatatatttccccagagaagatagaaaacatc
tacatccgcagtgaacccgtgtgtcagctctacgtccacggcgacagcctgcagtcgtgt
ctggtgggaatcatcgtcccggatcccgaggtctttccctcatgggctcagaagaaaggc
tttgaaggatgctttgatgagctgtgtgaaaataaagacctgaagaaagccatcctggat
gacatggtgcgtttgggaaaagctagtggcctccattcattcgaacaggttaaagacatc
tacattcacaaagaattgttctccatacaaaacggattgctgacccccactttaaaagcc
aagagaccggagttgaaggaatatttcaagatggaaatcgaacaactgtacagcaacatc
tccatgtaa
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