Ctenopharyngodon idella (grass carp): 127503939
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Entry
127503939 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2 isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127503939
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127503939
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
127503939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
127503939
NCBI-ProteinID:
XP_051734144
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All DBs
Position
21:complement(22399746..22439509)
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AA seq
330 aa
AA seq
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MSRPSSTGGAAGGLGAGKAGGSKHGGSGGTTASAAAAAAAAAAAAAAAAAAGVSGSVPGS
GTVPAAAVALPAAALPGQSAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKLSCCP
TCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTCPCPG
ASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHHFMLV
LEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVAAAIM
NSDCLVFDTSIAHLFADNGNLGINVTISMC
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgagccgtccgtcctctacgggtggtgcggccgggggactcggagctggtaaagcagga
ggaagtaagcatggaggttctggaggaacaaccgcctctgctgccgccgccgctgcagct
gctgccgccgcggccgcagcagcagccgccgcgggggtatctggctctgtcccgggctct
ggtactgtgcccgcggccgctgtagcccttccagccgctgccctaccaggacagtcagcc
gaactgacagcgttgtttgaatgcccggtgtgtttcgactatgtgctgcctccgatcttg
cagtgccaggctgggcacctggtgtgtaaccagtgtcggcaaaagctcagctgttgtcca
acctgtcgcggccctcttacgccgagcataaggaacttggcaatggaaaaagttgcatct
actctgccgtttccgtgtaagtatgcctcggctggatgtctgctgtcccttcaccacagc
gagaagccagaacatgaagaagtgtgtgagtttcgcccgtacacctgcccatgcccgggg
gcctcctgtaaatggcagggctccctggaggccgtcatgccacatctcatgcatgcccac
aaatccattaccaccttacaaggcgaggacattgtctttctggccacagatatcaaccta
cccggggctgtggactgggtcatgatgcagtcatgttttggccaccacttcatgctggtt
ctagagaagcaggagaaatacgagggacaccagcagttctttgcaatcgtgctgctcatt
ggcacgcgaaagcaagcagagaactttgcttaccgcctcgagttgaacggcaaccgtagg
cggctcacgtgggaggccacgccacgctcaatccacgatggcgtagcagcagccatcatg
aacagtgactgtcttgtatttgatacctctattgcccacctgtttgcagacaatggcaat
ctgggtatcaacgtgaccatctccatgtgctga
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