Ctenopharyngodon idella (grass carp): 127504007
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Entry
127504007 CDS
T08802
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127504007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127504007
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
127504007
Complex C
U4/U6.U5 tri-SnRNP related factors
127504007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_jaz
zf-met
zf-U1
SNRNP27
DUF4250
MG280
C2H2-zf_KIN17
Herpes_gp350_A
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
127504007
NCBI-ProteinID:
XP_051734270
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Position
21:18227991..18234892
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AA seq
198 aa
AA seq
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MASGSGSKNDFRRKWDKDEYEQLAQKRITEEREKKDGKPVPPVKRELLRHRDYKVDLESK
LGKTIVITKTTPQAEMGGYYCNVCDCVVKDSINFLDHINGKKHQRNLGMSMRVERSSLDQ
VKKRFEVNKKKLEEKQKEYDFEERMKELREEEEKAKAYRKEKQKEKKRKAEEDLNFEDDD
EMAAVMGFSGFGSSKKGH
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctggcagtgggtctaagaatgattttcgacgcaagtgggacaaagatgaatat
gaacagctggcccagaaacgaatcacggaagagagagagaaaaaagatggcaagcctgtg
ccccctgtcaaacgggagcttctccgccacagagattataaagtggatctggagtcaaaa
ctggggaagactatcgtcatcacaaagaccacaccacaggctgagatgggagggtactac
tgcaatgtctgcgattgtgtagtaaaagattccataaacttcttagatcatattaatggt
aaaaaacatcagagaaacctggggatgtccatgcgagtagagcgctcttcactggaccaa
gttaaaaaacgttttgaagtgaacaagaaaaagctggaggaaaagcagaaggagtatgat
tttgaggaacgaatgaaggagttgcgagaggaggaggaaaaagcaaaagcctacagaaaa
gagaagcaaaaggaaaagaaaagaaaggcagaagaagacctcaattttgaagatgacgat
gaaatggctgctgtgatgggattctcaggttttggatcctccaaaaaaggccactga
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