KEGG   Ctenopharyngodon idella (grass carp): 127504136
Entry
127504136         CDS       T08802                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03030  DNA replication
cide03410  Base excision repair
cide03420  Nucleotide excision repair
cide03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127504136
   03410 Base excision repair
    127504136
   03420 Nucleotide excision repair
    127504136
   03430 Mismatch repair
    127504136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cide03032]
    127504136
   03036 Chromosome and associated proteins [BR:cide03036]
    127504136
   03400 DNA repair and recombination proteins [BR:cide03400]
    127504136
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    127504136
  DNA Replication Termination Factors
   ELG1-RFC complex
    127504136
Chromosome and associated proteins [BR:cide03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    127504136
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     127504136
  Check point factors
   HRAD17(Rad24)-RFC complex
    127504136
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 AAA_22 nSTAND_NTPase5 RCF1-5-like_lid AAA_14 AAA_16 Mg_chelatase Viral_helicase1 AAA_11 Rad17 RuvB_N AAA_assoc_2 AAA_19 nSTAND3 AAA_24 MipZ AAA_18 DNAX_ATPase_lid ABC_tran AAA_5 AAA_28 AAA_23 AAA_25 AAA_30 MeaB SLFN-g3_helicase NTPase_1 RNA_helicase FtsK_SpoIIIE
Other DBs
NCBI-GeneID: 127504136
NCBI-ProteinID: XP_051734540
LinkDB
Position
21
AA seq 352 aa
MDVEMKETDSEQSQADVQPKKDDTAPKTSTAYELPWVEKYRPLKLNEIVGNEETVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAMKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYSKLRDDQIMMRLTEVVEKENLHVTNDGLEAIIFTAQGDMRQALNNLQSTNSG
FGYINSENVFKVCDEPHPLLVKSMLEHCVNANIDEAYKIIEQLWSLGYSPEDIIGNIFRV
CKTFQMAEYLKLEYIKEIGYTHMKVAEGVNSLLQMAGLLGRLCSKTAAPDAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggatgttgagatgaaagagacagacagtgaacaaagtcaagccgacgtacagcctaaa
aaggatgatactgcgccgaaaacatcgactgcttatgaactaccatgggttgaaaaatac
agacctcttaagttaaatgaaatagttggaaatgaggaaactgtcagcagactggaggtg
tttgcaagagaaggaaatgtgcccaacatcatcattgctggtcctcctggcactggaaaa
actaccagcattttgtgtttggctagagctcttcttggcccggccatgaaagatgctgtg
cttgagctgaacgcctcaaatgaccgtggtattgatgttgtaagaaacaagatcaaaatg
tttgcccagcaaaaggtcacactccctaaaggtcgccacaagatcataatcttggatgag
gctgacagcatgacagatggagctcagcaggctctcagaagaaccatggagatatactct
aaaaccacacgctttgcgctggcatgtaatgcatcagataagatcatagagcccatccag
tcccgctgcgctgtgctgcgttacagcaaactcagagacgaccagatcatgatgcgtctg
acggaggtggtagagaaggagaacttacacgtcaccaacgacggccttgaggccatcatc
ttcactgctcaaggcgacatgagacaggctctgaataacttgcagtcaacaaactctgga
tttggttacatcaacagtgaaaatgtgttcaaggtgtgtgatgagccacatcctctgctg
gttaaaagcatgctagagcactgcgtcaacgccaacattgatgaagcatacaagattatt
gagcagctttggtcactcggatactcaccggaggacataatcggaaacatctttagagtg
tgtaagacctttcagatggcagaatatttgaagctggaatatattaaggaaattggctac
acacatatgaaagtggcagaaggggtgaactctctgttacagatggctggtctgttgggg
cgactgtgcagcaagacggctgcaccggacgcaagctaa

DBGET integrated database retrieval system