Ctenopharyngodon idella (grass carp): 127504142
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Entry
127504142 CDS
T08802
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127504142
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127504142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_dom
SDA1_C
HbrB
Motif
Other DBs
NCBI-GeneID:
127504142
NCBI-ProteinID:
XP_051734545
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Position
21:complement(6309275..6317064)
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AA seq
684 aa
AA seq
DB search
MSGRHNNKLPTNLPQLQNLIKRDPKSYTEEFLQQYRHYQSNVEIFKHQPDKSNKDLAELV
MFLAQVGHCYLEELSDFPQQLTDLLLNHHTVLESDLRMTFCKALILLRNKDLVSPTSLLG
LFFELLRCHDKLLRKTLYTHIVTDIKNINAKHKNNKLNTTLQNFMYTMLRDSNPIAAKIS
LDVMVELYKRDIWNDSKTVNVITTACFSKVTKILVAGLKFFLGKDEDEKKDSDSESEDDA
PTARDLMIRYSTGKKTSKNKRKMEKAMKVLKKHKKKKKVEVFNFSAIHLIHDPQDFAEKL
LKQLESSNERFEVKIMMMELISRLVGIHELFLFNFYPFVQRFLQPHQREVTKILLCAAQA
SHQLVPPEIIEPVIMTIANNFVTDRNSGEVMTVGINAIKEVVARCPLSMSEDLLQDLTQY
KSHKDKNVVMSARGLIQLFRDLNPKMLHRKDRGKPTESSKEAKIQNYGELEAKDYIPGAE
VLEVEEKVDEEEDEDGWESASMSEDDEDGEWVNVHHSSDEDQTEVAEKLQSIPEDERKAK
AAVVSTSRLLTQDDFKKIRIAQMAKEVSSAPGKGQKRKNVESDEEEERGELLSLRDIERL
HKKPKSDKETRLATAMAGRTDRKEFVKKRSKLNPYASTSNKEKKRNKNFLMMKHSQNVRT
KGKRSFREKQMALRDALLKKRKRK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggccgtcacaataacaaattaccgacgaacctcccacagttgcaaaatctgatc
aagagggatcccaaatcctatacggaggagtttttgcaacagtatcgtcattatcagtca
aatgtggagatctttaaacatcaacctgacaaatctaacaaagacctggccgagttggtc
atgttcctggctcaggttggacactgttatttagaggagctatcagacttcccacagcag
ctgactgatcttctcttaaaccatcatactgtgctggagtcagatctcagaatgacgttt
tgcaaagccctcatcctcttgaggaacaaagatctggtcagtcccaccagtcttctgggg
ctgttctttgagctgctgcgctgtcatgacaaacttttgcgaaagactttatacacccat
attgtgaccgatatcaaaaatatcaatgccaagcacaaaaacaacaaactgaacacgacc
ttacagaacttcatgtacaccatgctgagggattcaaaccctattgctgccaagatctct
ttagatgttatggttgaactttacaaaagagacatctggaatgactctaaaaccgtgaac
gtcatcaccacagcgtgtttctccaaagtcacaaagatccttgtagctggattgaagttc
ttcctgggaaaagatgaagatgaaaagaaagacagtgattcagagtctgaggatgatgcg
ccaacagccagagatctaatgatccgatattccactggaaagaaaacgtccaaaaataag
aggaaaatggagaaagccatgaaagtcctcaagaaacataaaaagaagaaaaaagtagag
gtttttaatttctccgccatccacttgatccacgatccacaagatttcgcagagaagctc
ctgaagcagctggagagctcaaacgagcggtttgaggtgaagatcatgatgatggagctc
atctctagacttgtgggaattcatgagcttttcctttttaatttctatccatttgtccag
cggttccttcagcctcaccagagagaggtgaccaaaattctgttgtgtgccgcccaggcc
tcccatcagctggtccctcctgagatcattgaaccagtcatcatgaccatcgccaataac
tttgttacagacagaaattcaggggaggtcatgacagttggaatcaacgccataaaagaa
gtggtagcccgctgtcctctctcgatgtcagaagacctgcttcaagatctcacacagtac
aaatcccacaaagataaaaatgttgtgatgtctgccagaggtcttatccagctcttcaga
gatctcaatccaaagatgctacacagaaaagacagggggaagcccacagaatcttctaag
gaggccaaaatccagaactatggagaactggaggccaaagactacatccctggtgctgag
gtgctggaagtagaggagaaagtagatgaagaggaagacgaagacggctgggagagcgcc
agcatgagtgaggacgatgaagatggagagtgggtgaacgtgcatcactcctctgatgaa
gatcagacagaagtggctgagaaattacagagtatcccagaggacgagcgcaaagccaaa
gctgccgtggtcagcacgagtcgtctcctcacgcaggacgacttcaaaaaaatccgcatc
gctcagatggccaaagaggtcagctctgctcccggaaagggtcagaagaggaagaacgta
gagagtgatgaggaagaggagagaggagagttacttagcttgagagacattgagcgtctt
cataagaaacccaaatctgacaaagaaacacgacttgcaacagccatggctgggcggact
gataggaaggagttcgttaaaaagagaagtaagctaaacccgtacgccagcaccagtaac
aaggagaaaaaacgaaacaagaacttcctaatgatgaaacacagtcagaacgtgaggacc
aagggcaaacgctccttcagagagaaacagatggcccttagagatgcactcttaaagaag
agaaaacgcaagtaa
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