Ctenopharyngodon idella (grass carp): 127504152
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Entry
127504152 CDS
T08802
Name
(RefSeq) tRNA pseudouridine synthase A isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127504152
Enzymes [BR:
cide01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
127504152
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
127504152
Prokaryotic type
127504152
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-GeneID:
127504152
NCBI-ProteinID:
XP_051734608
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All DBs
Position
21:complement(9334066..9337679)
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AA seq
397 aa
AA seq
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MLRSCRIIHILSRHLSQFSKSKMTEDSIKALKRPADDSHPETEHEDKKLKTDQDEKKYPK
KKVALLMAYSGKGYYGMQRNAKNSQFRTIEDELVTALIRAGCIPEGHGEDMKKMSFQRCA
RTDKGVSAAGQVVSLKLWMIENIMDKINAHLPSHIRILGYKRVTGGFNSKNNCDARTYSY
MLPTVSFSPKDYNQEDTSFRVSSETLQKVNHLFGLYKGTHNFHNFTSQKGPRDPSAKRYI
THMSCGEPFVRQEAEFAVITVRGQSFMMHQIRKMIGLVIAVVKGYVDEAVIERSWGEEKV
DIPKAPGLGLVLERVHFDRYNKRFGGDGIHETLEWTEEEETIAAFKDKHIYPSIVETELL
EKSMVNWMATLYVHNFEATATGNQERKDDDEDGNASD
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtcctgtcggatcattcatattttatcccgtcatttatcccagttctcaaaa
tcaaagatgactgaggattcaatcaaagctttgaaaagaccagcagatgattcacaccct
gagactgagcatgaagacaagaagcttaaaacagatcaagatgagaagaaataccccaag
aaaaaggtggccctgctgatggcatattcaggcaaagggtattatgggatgcagagaaat
gcaaaaaactctcagttcagaaccattgaggatgaactggtcactgctcttatcagagca
ggatgtattccagagggccatggagaagacatgaagaagatgtctttccagcggtgtgcg
cgaacagataagggtgtttctgctgcgggtcaagttgtgtctctgaagctgtggatgatt
gagaacatcatggacaaaatcaacgctcatctgccatctcatataagaattttaggatac
aagagagtcacgggtggcttcaactccaaaaacaactgcgatgccagaacgtattcctac
atgcttcccactgtgtctttctccccgaaggactataaccaggaagacacgtcattccgt
gtgagttcagagacccttcagaaggtcaaccatttgtttggcctgtacaaaggcacccac
aacttccacaatttcacttcgcaaaaaggtccccgggaccccagcgccaaacgctacatc
acccacatgtcctgcggagagccctttgtgagacaggaagctgagtttgctgtcatcaca
gtaagaggccagagcttcatgatgcaccagatccggaagatgatcggccttgtgatcgct
gtggttaaaggatatgtggatgaagcggtgatcgagaggagctggggagaggagaaagtt
gacattcccaaggcccctgggcttgggttagtgctagagagggtgcactttgaccgctac
aacaaacgctttggaggagatggcatccatgagactctggaatggactgaagaagaagaa
accattgctgcttttaaggacaagcacatttatccgagcatcgtggagactgagctcctt
gagaagtccatggtgaactggatggctacactgtatgtccacaattttgaagccacggcc
acgggaaaccaagagcgaaaagacgatgacgaagatggaaacgcatctgactga
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