Ctenopharyngodon idella (grass carp): 127504237
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Entry
127504237 CDS
T08802
Name
(RefSeq) nuclear RNA export factor 1
KO
K14284
nuclear RNA export factor
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
cide03013
Nucleocytoplasmic transport
cide03015
mRNA surveillance pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127504237
03015 mRNA surveillance pathway
127504237
03008 Ribosome biogenesis in eukaryotes
127504237
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127504237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127504237
03009 Ribosome biogenesis [BR:
cide03009
]
127504237
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127504237
mRNA cycle factors
Stress granule specific factors
127504237
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
127504237
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tap-RNA_bind
TAP_C
NTF2
LRR_8
LRR_9
LRR_4
Motif
Other DBs
NCBI-GeneID:
127504237
NCBI-ProteinID:
XP_051734745
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All DBs
Position
21:complement(16464383..16474870)
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AA seq
641 aa
AA seq
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MATADGSRYYSEHDDRVGGPKHRNRKGRGPFRAPMYSDQISRPRQRGGHNGGGGGGGGPG
PRSRLHDDDGDVTMAEGPQDSGSQRRFNPYGRPQNRREERNRKGGRGGGGGGGNEDRGGN
RYGGRGGGGGSGSDGSRSKNWFKMTIPFGKKYDKDWLLSSLQSVCSMPFHAVHYHTDGNK
AQFYIEDSTTANALFKVSRKITDKDGYKVTVIMNSCPPPTLIHTDLKTTDMEHLKQCMAK
RFDGSQQALDLNNIRVDPDLVSQNIEVTLNRRNSMLGVIKIIEENIPELVCLNLSNNRLY
RLDDLADIVNKVPNLKILNLSHNELKTERELDKLSGLKLVDLSLEGNPLCGHFKNQIDYV
SAIRERFPKLLKLDGHDLPPPIGFDLEVAPATLPPCKPSYFCSEEIKTIIHCFLQQYYSI
YDSGNRQPLLDAYHDGASFSLSIPFMVQNPSKYSLGDYQKDSRNLKRMKDPTTRFRLIKH
TRLNVVAFLNELPKTQHDIASFIVDVNTYTATLLAFTVSGVFKEMDGKSRETYRAFSRVF
IAVPAGNGLCIVNDELFVRNATTEEIRRAFVAPAPTPSSSPVPTLSAPQQEMLAAFSLKS
GMNLEWSQKCLQDNDWDFDRAAQIFTGLKAQGKIPDVAFVK
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggacggttcgcgctactacagtgagcatgatgaccgtgtcggtggacca
aagcatcgcaaccgtaaaggcagaggccctttcagagcccccatgtacagcgatcagatt
tctcggccaaggcagcgaggcggtcacaatggtggtggaggtggaggtggaggccctggt
ccccggtcgagactgcacgatgatgatggagatgtgaccatggcggaaggtccacaagac
agcggctcccagcgcagattcaatccatatggccggccacagaatcggcgtgaggaacgc
aatcgcaaaggtggacgaggtggcggcggaggaggtggaaatgaagatagaggtggcaat
cgatatggaggcagaggtggtggaggtggcagcggttctgatggaagtcgtagcaagaac
tggtttaaaatgactattcctttcggaaagaaatatgacaaagattggcttctgtcttca
cttcagagcgtatgttcaatgccattccatgcagttcattatcacactgatggcaacaag
gcccagttttatattgaagactccacaactgctaatgctttgtttaaagtgtcacggaaa
ataacagacaaagacggatataaggtgactgttattatgaacagctgcccaccaccaact
ttgattcacactgatctgaagaccacggatatggagcatttgaagcaatgcatggccaaa
cgctttgacggatcacagcaggctcttgatctgaacaacatcagagtcgatccagatttg
gtttctcaaaatattgaggttactttaaataggaggaactccatgctgggggttatcaaa
ataattgaggagaacattcctgagctggtttgtctgaacttgagtaacaaccggttatac
aggctggatgacttggcagatattgtcaacaaagttcccaacctgaagattctcaatctg
tcacacaatgagctgaagacggagagagaacttgataaactgagtggtctgaagctggtg
gatctctcattggagggaaatcctctgtgtggccacttcaagaaccagatcgactatgtc
agtgccattcgggaacgattccccaagctgctcaaactggatggacacgaccttccgcct
cccattggttttgatttggaggttgctcctgcgactctccccccctgcaagcctagctac
ttctgctctgaagagatcaagaccatcatccattgcttcctgcaacagtattacagcata
tatgactcaggaaacagacagcccctgctagacgcctaccatgacggagcatctttctcc
ctcagcattcccttcatggttcaaaacccttcaaaatatagtttaggggattaccagaaa
gacagtcgcaatctcaagcgcatgaaagaccccactacacgttttcgtttgattaaacac
acacgattaaatgtggtggctttcctgaacgaactccccaaaacccagcacgacatcgcc
tcctttatcgtagatgtcaacacctacacagctacactgttggcatttacagtcagtgga
gttttcaaagaaatggacggcaagtcccgagaaacatacagagcattctctcgagtattc
atcgctgttcctgctggaaatggtctatgcattgtgaatgacgagctgttcgttcgaaac
gccactacagaggaaattcgccgtgctttcgttgcccccgcccccacaccatccagcagc
cctgtgcccactctgtccgcccctcaacaagaaatgcttgctgccttctcactaaagtct
ggcatgaacctagaatggtctcaaaagtgcctacaagacaacgattgggattttgacaga
gctgctcagatcttcaccggcctaaaggcacaaggaaagattccagatgttgcatttgtc
aaatga
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