Ctenopharyngodon idella (grass carp): 127504294 Help Entry 127504294         CDS       T08802                                  Name (RefSeq) probable helicase senataxin   KO K10706   ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3] Organism cide  Ctenopharyngodon idella (grass carp) Brite KEGG Orthology (KO) [BR:cide00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:cide03021]     127504294 Enzymes [BR:cide01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      127504294     5.6.2.5  RNA 5'-3' helicase      127504294 Transcription machinery [BR:cide03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      127504294 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  AAA_11 AAA_12 SEN1_N AAA_19 UvrD-helicase AAA_30 AAA_22 AAA_16 ResIII nSTAND3 AAA_10 Helicase_RecD NPHP3_N Motif Other DBs NCBI-GeneID:  127504294 NCBI-ProteinID:  XP_051734813 LinkDB All DBs Position 21:3100433..3120671 Genome browser AA seq 2237 aa AA seqDB search MEKCLWCTKALEAEGDVAIVAILHRYSSGQLSAKMMDSLNEDLNCCMECVMEYHRARDKV PELHKRLWEKEKARLLHILGLYLDKELEEDDLFIIEDDHEKPVSMISPAEFHDRLRCPLF EVLKYPYLLCYRDLCDLVVKALCKLQDMNSSLIVFEKYQGTYLLLVHPNEQVRRWAIEAA KTSKSVDRDSFYDLQEIFTCMFYVIELGISLDFPDLDPEAYAGGTVKMLPSHLYDSQNKK NYWLGICMLLTQLSAEAMDSLFMGEFNIPLCILHTMDRLKNEDNPASDPFWPALHCFMVI LDRLGSKIWGQVDPSMAFQTITGAASYDAEIRSIQQKTIGRMVKEEPEYDDNVVTCSQMV YDCYASEKMNQASGSTSNSGICSNYVIYEDMQSLVKVLDSEMGRSMRVYGSTFLWFIPFV RSIMELPELNASYISEVIHFLCDKILANRHVLTGQTSACDKVTEFFTRILIQIVELHSTE GRMGILSRCAPKWVEVIVMCIVLSDEPHGPPDKMGGIHSVSSTSYNLGIVGRLPTSGGGI GAIILGCMTLIRLLLKEGIKTGSVPHATHFLNLLNKQLRGATNKRWNLTHSESIELQKCL KSVVRSMQERPASASSVVPSPSTSTLEAATNTVISRKSMPTLKQQHEDQEAGPSRACGSS FIKEEPLWNDENCFFDKDFCSGLENIMKAKKEPPAPMLISELRPAVESAQIKPDLGMLQE IRSKLNKQNLSKIEAITKRRPSESLKPVHLASAKEDLGFRAVEVDDDDDEDDEPLDVRRA RLMKSSSYKLESSDSEVDSSDVGKTHTRSTGNSKENVKSSTIVISDDEDSDNDERPNSIL RSIDKECTKKNKSPEHPVLPDSPGRDYDDLSESQVFEFETQQYVASAWDHSDFDASVLMK KSDETPKPQVEKAPREASPCSSDTEMIPDEDIERACQQAEEKIRQQQQLQEPADSCTLSK ASSTAESWDKFVKPKPLQVKSTKTIPTEKRDILQHKKPLIIDALAQKVRRNPWKRSSTVL DIEEPSSSTTPSSSSSSSSSGMQSSSPSSSSVSSPYFSASTSRGTPAIVPPKKVRKAVEP ESTAERLGLKKKERKAFELSQRSLDCVAKLRCHGQKVQVKPQQKTKRVCRTTKTSPQKRI VKGNKKLLGSQDIQFFRQSREKHQRPATGANTTLAPKPAKTNQPGEVPLSKSTVASNGDG DIFTRFQPDPDQQQDNEKTASESSDSRDDGVGSNRTIIESKYFQTSEPADVNMEEEKATH TSNEEADEEWMFLTQMEPTDMELCSQMEQIEDENEELFLTQRDPVDMDLDTDSESDIPGQ PVLTHKPLQTPHAPLSITMCNDEKVADHLFLKPGMPPMSQKKAKPSTTKIYNPSSRSASL VLEMEKGAKPPLAAKVAKAKIPRPPPAMPPPAVPPPKTLKPVPPPQFPKPFPSQQTPLPL GPKLVTSTKISSTSEPPSYKVYQRPEAPVHKPAPTMDQSPKFDLSDLTQAILKWEYGMLD NYKSFGSPKDLCQLPLKNVPVKFPSYLEYYNTLYPLLLINAFEEMASEWLKEGRLKLNLK VQGIEYSNRTASASFTASISQESDMKQQYPKEDDLVLLWLPDNTGAYAHDEPYFHEPHPH FGYVSRSNVSRGPGSMSTLNLTIQTRGNVSSVNAQPVLCEVIGSLISIFREFRALCLLRN GPMLRPVLAPHVSYFTHTPHSPPDLDVPEYNRDQARAISCGLAMMQRKEKTPKFLLIHGP PGTGKSKTIGGLLYKLLSSGNNSVASVGNLHSKTRRTRVLLCAPSNAAIDNLMKKVIVIF KEKCRNINAPQGNCGDINLVRLGSERTISKSLKPFSLDQQTKARALRAQQVVEADVQRRK EQLDQNIDNISQRCAKTPKDSTDFKRLMDRKRELLKEREGLSRQSKECRSRRQESQAFVL QNAHVICCTLSTSGSIVLENAFRRLGHEPFTCVIIDEASQAKETETLIPMLYRSPSIILV GDPNQLPPTVVSQRAKELGYDQSLMARLCKNLHPSNPQLSPILLLSMQYRMHPDICEFPS KYIYNSALKNDWQGQCREYDQEQWTITKSELRLLRSLRGPCMCETAQKRCSFTWPFKPYK VFDVTDGREVKERDSFMNPKEVRLVLLLLKLLGEKQSVRVGVITPYNAQKQLILEAIRGS GINKQLQVEIDTVDGFQGREMDCIIVSCVRASSEMGSIGFVGNRQRMNVTITRARFSLFI LGHLRTLRVTNKVIGER NT seq 6714 nt NT seq  +upstreamnt  +downstreamnt atggagaagtgcctgtggtgtaccaaggccctggaggcggagggagatgtggcgatagtt gccatcttgcatcgctacagttcagggcagctgtctgcgaagatgatggactctctgaat gaggacctcaactgctgtatggagtgtgtgatggagtatcatcgagccagagacaaggtc cctgaactgcacaagcgtttgtgggaaaaagaaaaggctcgactcctgcacattttggga ctctatctggacaaggaactggaagaggatgatctatttatcattgaagatgatcacgaa aagccggtgtcaatgatctctcctgcagaattccatgaccgtctccgctgccctctgttt gaagttttgaagtatccgtacctgctttgctaccgtgatctgtgtgatttggtggtaaag gccttgtgtaagttgcaggatatgaatagttctttaattgtgtttgagaagtatcaagga acatatctgcttctggttcatcccaatgaacaggtgcgccgttgggccattgaagctgca aagacatcgaagagtgtggacagggacagcttctatgaccttcaagagattttcacttgc atgttttatgtcattgagcttggaatatctttggattttccagacttggatcctgaggct tatgcagggggcactgtaaaaatgctgccgtctcacctctatgattcgcaaaataagaag aattactggctaggcatctgtatgttgctaacgcagctcagcgctgaggcaatggactct ctgttcatgggagagtttaacatcccactttgcatactccacacaatggataggttgaaa aatgaggataacccagcttctgacccattctggccagccctccactgttttatggtaatt ctggaccgacttggttctaagatctggggtcaggttgaccctagtatggctttccagacc atcactggagcagccagctatgatgcggaaataagaagcatccagcaaaaaaccataggc aggatggttaaagaagagccagaatatgatgacaatgtggtgacttgcagtcagatggtg tacgactgttatgcctcagaaaaaatgaaccaagcatctggttcaacatccaacagtggt atttgcagtaactatgtgatctatgaggatatgcagtccttggtcaaagtgcttgattct gaaatgggccggagtatgcgtgtatatggaagcacttttctgtggtttattccatttgtg cgttccataatggaacttccagagctcaatgcttcatatattagtgaagtcattcacttt ctatgtgataaaatactagctaatcgacacgtactgaccggacagacaagtgcgtgcgat aaagtgacagaattcttcacccgtatcctcattcagattgttgagctgcactctacagaa ggacgtatgggaatactttctcgctgtgcccccaagtgggtggaagtgattgtcatgtgc atcgtcctatcggatgaaccacatggaccaccagacaagatgggtgggattcacagcgtc agttcaacctcgtacaatcttgggatagtagggagactacctacatctggaggtggtatt ggtgccataattctaggctgtatgacactgattcgactgctgctaaaagaaggtataaag acaggatctgtcccacacgctacccattttttgaatttgcttaacaagcagctgcgtgga gctacaaacaaacgatggaatctaacacattctgaatctattgagcttcaaaagtgttta aaaagtgttgtccggtcgatgcaagaaagacctgcttctgcatcctctgttgttccatcc ccatctacatcaacattagaggcagctacaaacaccgttatttccagaaaatcaatgcca accctgaaacaacaacatgaggaccaggaggcaggtccaagcagagcctgtggctcctct tttattaaagaggagccactttggaatgatgaaaattgcttctttgataaagatttctgc agcggtcttgagaacatcatgaaggctaaaaaggaacctcctgcccccatgttaatttca gagctgagacctgctgttgagtcggcacaaattaaaccagatctgggtatgctgcaggaa attcgatccaaattaaataaacagaatttgtcaaagatcgaagccattaccaaaagaagg ccgagtgagtccttaaaacctgttcacttggcatcagctaaggaggatcttggttttaga gctgttgaggtggatgatgatgatgatgaggatgatgaacccctcgatgtcagacgagcc cgattgatgaaatcctctagctacaagcttgaatctagtgactctgaagttgactctagt gatgttggaaaaacacataccaggtccacgggcaactctaaggaaaatgtaaagtccagt accattgttatttctgatgatgaagattctgacaatgatgaaaggccaaatagcatcctg aggtctattgacaaggaatgtacaaagaaaaataaatctccagaacatcctgttttgcct gatagtccagggcgtgattatgatgatctcagtgaatcacaagtgtttgagtttgagacc cagcaatatgtggcatctgcctgggatcattcagattttgatgcgtcagtcttgatgaag aaatcagacgaaacacccaaaccacaggtggaaaaagctcctcgtgaagcgtctccatgt agttcagatactgaaatgattccagatgaggacattgagagggcctgtcagcaagcagaa gaaaagatccgacaacaacagcagctacaagagccagcagattcgtgtacattgtccaaa gcatccagtactgcagaaagctgggataaatttgtcaaaccaaaacctctgcaggttaaa agcacaaaaacaattccaactgagaagagagacattttacagcataaaaagccattgata attgatgcccttgctcaaaaagtcaggcgcaacccatggaaacgcagctccacagttctg gacatagaagaaccttcctcgtcaactactccatcatcatcatcatcatcatcatcatct ggtatgcaatcttcctctccatcctccagctcagtttcctctccttatttttctgcttcc acctcacgtggcacccctgccattgttcctccaaagaaggtgcgtaaagctgttgagcca gaatcaacagcggagcgtttgggattaaaaaagaaagaaagaaaagcctttgagctttct cagcgttccctggattgtgtggctaagctgaggtgccatggccagaaagtgcaggtgaaa ccacaacagaagacaaaacgagtgtgtcgaaccactaagacctctccacagaaacgtata gtaaaaggcaacaagaaacttctaggatctcaagatattcagtttttcaggcaaagccgt gagaagcatcagaggccagcaacaggagcgaacacaacattagctcccaaaccagcaaag acaaatcagccaggtgaagtacccttatcaaaatctacagttgcaagcaatggggatggg gatatctttacccgctttcaaccagatcctgaccagcagcaggataatgaaaagactgca tcagaatccagtgattctagagatgatggggttggaagtaacaggacaataatagaatcc aagtactttcaaaccagtgagcctgctgatgtcaacatggaagaagaaaaagccacccac acttcaaatgaggaggctgatgaagaatggatgttcctcactcagatggaacccaccgac atggaactgtgctctcaaatggagcagattgaggatgaaaatgaagaactctttcttacc cagagagatcctgttgacatggaccttgatacagatagtgagtcagatattccaggtcaa ccagtgttgacccataaacctttacagactcctcatgcccctctttcgattaccatgtgt aatgatgaaaaagttgctgatcatttgttcttgaagcctggcatgccaccaatgtctcag aaaaaggccaaaccttctaccacaaaaatatacaaccccagctcccgcagtgcctcacta gtccttgaaatggaaaaaggagctaagcctcctcttgctgctaaagttgcaaaagcgaag attccccgaccgcccccagctatgccgcccccagctgtgccaccccccaaaacattaaag cctgtgcctcctccacaattcccaaagccatttccttcacaacaaactcctctgcctctg ggccccaagttggtcactagtactaaaataagctctacttcagagccaccatcttacaag gtataccaaagacctgaggctccagttcataaaccagcacccacgatggatcaaagtcca aagtttgacctttctgacttgacccaagcaatccttaaatgggaatatggaatgcttgac aattacaaatcatttgggagtccaaaagatctatgccaactgccgctgaagaatgtgcca gttaagttccctagctacctggagtactacaacaccttgtaccccctgctgctaattaat gcatttgaagagatggctagtgaatggctcaaagagggcagactcaagcttaacctaaag gtccagggaatagaatacagtaatcgcacagctagcgccagcttcacagcgagcatttct caggaaagtgatatgaagcaacagtatccaaaagaagatgaccttgtgctgctttggctg ccagacaacactggggcatatgcccatgatgaaccatatttccatgaaccacatcctcat ttcggttatgtgtcccggtccaatgtttccagaggtccaggttccatgtcaaccctaaac ttgacaattcagacccgtggtaatgtatcttcggtgaatgcccaacctgtgctctgtgaa gttattggatctttgatcagcatatttcgggagttccgtgcactgtgtttactgcgaaat ggaccaatgttgcgtcctgttcttgctccacatgtgtcttatttcacacacactccgcat agcccaccggatctggatgtaccagagtacaacagggaccaggcaagagcaatatcctgt ggtcttgccatgatgcagagaaaggagaagaccccaaaatttctccttattcatggtcct ccaggaactgggaagagtaaaaccattggtggcctgttgtacaaactactgtcttcgggt aataacagtgtcgcttctgtggggaaccttcactccaagactcgaaggacacgcgttctt ctctgtgcaccctctaacgctgccatcgacaatctgatgaagaaagtcattgtgatcttc aaagaaaaatgcagaaacatcaacgctcctcaaggtaactgcggtgacataaacttggta agactgggaagtgaaaggaccatctcaaaatcactaaaacctttcagcctcgaccagcag actaaagctagagcactgcgagcccagcaagttgtagaagctgacgtacaaaggcggaag gagcaactggaccagaatattgacaatatctcccagcgatgtgcaaagacaccgaaggat tctactgatttcaagaggttgatggataggaagagggagcttctgaaggagagagaagga ctgagtcggcagagtaaagagtgtcgcagtaggcgtcaagagagtcaagcatttgtgttg cagaacgctcatgtgatctgctgcactctcagcaccagtggaagtattgtcctcgagaat gcattccgtcgactgggacatgaaccatttacctgtgttatcattgatgaggctagtcag gctaaagaaactgagacgctgattcccatgctttaccgaagtccttccataatccttgtt ggtgatcccaaccagcttccaccaacggttgtctcccagagagcaaaggagttgggctac gaccaatctcttatggcaagattatgcaaaaatcttcatccatcaaacccgcaactctcg cccatcctcctcctcagcatgcagtaccgcatgcacccggacatctgtgaattcccctcc aagtacatctacaacagtgctcttaagaatgactggcaggggcagtgcagggagtatgat caggagcagtggactataaccaagtctgaattaagactcctaaggtcattgagaggaccg tgcatgtgtgagaccgctcagaaacgctgttccttcacctggcccttcaagccctacaaa gtgttcgatgtgacggatgggagagaggtgaaggagagagattcatttatgaacccaaaa gaggtccgtttggtcttgctgctgttgaagctgctgggcgagaagcagtcagtgcgagtg ggtgtcatcacgccctacaacgcccagaaacaactcatactggaggccattaggggttca ggcatcaacaaacaacttcaggtggaaatagatactgtcgatggctttcagggcagagaa atggactgcatcattgtgtcttgtgtaagagctagcagtgaaatgggttccattgggttt gttggaaatcggcagaggatgaatgtaaccattaccagagccagatttagtctcttcata ctgggacatctacgcacactcagggtaacgaacaaagtgattggggagcgttga

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