Ctenopharyngodon idella (grass carp): 127504447
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Entry
127504447 CDS
T08802
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
cide04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127504447
04120 Ubiquitin mediated proteolysis
127504447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127504447
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127504447
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
U-box type E3
127504447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
127504447
NCBI-ProteinID:
XP_051734967
LinkDB
All DBs
Position
22:complement(19873599..19903641)
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AA seq
1348 aa
AA seq
DB search
MEQLSPEEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGASSQPVPPAP
SHSLGLNAQNVTPATSPMGASGVAYRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
TASCEKSMSQVDVDSGIENMEVDDSDRREKRNLAEKDSSSNPDVSEEQALQLICKILRVS
WKEQDRDVIFLPSLAAEFQKNPRDVYSDFKDLIGQILMEALMMSTRSRDCNPFASLTATS
QPITAARSPDRHLTLIPPSSQSASPMMPCAGSFGASSLSSLYDSSPNPLALSSARMSAPS
VPPASAAAFPVPPSPPASRPPASLPSPSAPLPISQRYRPYSLSSSIPISPSPRSTPSGTL
TPPTTSGISSSPSPRHPNTQTSTPLPLLPGSPSTMARRTALAARMPSSPFSLLFFALSDL
PQDSSDEELEEEEEEDFSGVQFGSSLGASGGGMTGDSGSDRFTIESCKETEMLNYLIERF
DSVGMEERKAPKICSQPAVSQLLSNIRSQCISHAALVLQGALTQPRAPLQPSLLVPYMLC
RNLPYGFIQELVRMTHQEEEVFKQIFVPILQGLALAVKECSFDSDNFKFPLMALAELCEI
KFGKTHPVCNLITSLPLWCPDPLSPGTGREIQRLSFLGAFFSLSVFAEDDTKVGDKYFSG
PAITMENTRVVSQSLQHYLESARGDLFKILHNILLNGETREAALSYMAALVNRNVKKAQM
QTDDKLVSTDGFMMNFLWVLQQLSMKIKLDTVDSLYIFHPKCRLNLSREETRLNATMEDL
KSWLAELHEDPTKFSEPKFPTECFFLTLHAHHLSILPCCRRYIRRLRAIRDLNRTVEELK
NSENQWKESPLANRHREMLKRCKTQLKKLVRSKACADAGLLDENLLRRCLQFFSMVIQLI
LRMVEPAFPHVTLPLNPEIPKNFAALPEFYIEDVAEFLLFIVQYFPQVLYEPCTEDIVTF
LVVFLCSQNYIKNPYLIAKLVEVLFVTNPAVQPRTQRFFEMMESHPLSVNQLVPALMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNINHQGTFLEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEIQEEMKNKEQWDQLPREQQQSRQSQLTQDERVSRSYLALATETV
DMFHILTKQVQKPFLRPELGPRLAAMLNYNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMRKAGIKSTIAIEKFKLLLEKVEEI
VARNSQSEMDYSDAPDEFKDPLMDTLMTDPVQLPSGNIMDRSIILRHLLNSPTDPFNRQP
LTESMLEPVPELKERIQAWMREKQTGRF
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggagcagctcagtcctgaagagattcgaagaaggcggctggcccggttagccggagga
cagacatcacagcccagcacacccctcagcacccctttgacatccccacagagagagact
cccccaggacccttgccagggccatctggggcttcatcgcagcctgtcccaccagctcca
tctcactctctgggcctaaatgcccaaaatgtcacccctgctacttctcctatgggggcc
tctggggttgcttaccgcagccagagcagcgagggcgtcagttcgctctccagctctcca
tctaacagcctggagacgcagtcccaatccctgtcccgctctcagagcatggacattgac
acagcctcctgcgagaagagcatgtcccaagtagatgtggactcaggaattgagaatatg
gaggtggatgacagtgatcgcagagagaaaaggaacctggctgaaaaggattcttcatcc
aatcctgacgtctctgaagagcaggctctgcagctcatctgtaagatcttgcgtgtttcc
tggaaggaacaggaccgtgatgtcatcttcctcccctcacttgctgctgaattccagaag
aaccctagggatgtttactctgacttcaaagacctgatcggacagattttaatggaggct
ctcatgatgtccacccgctcgcgtgactgtaacccattcgccagcttgactgccacatct
cagccaattactgctgccagatccccagaccgtcacctgactctcatcccaccctccagc
cagagtgccagtcccatgatgccctgtgctggttcatttggtgccagctcactttccagt
ctttacgatagtagcccaaacccacttgctctgagctctgccagaatgagtgctccatct
gtcccaccggcttctgcagccgccttcccggttccccccagtcctccggcctctcgccct
cctgccagccttccctctccatccgccccactgcccatctcccagagatacaggccctac
tcccttagctcatccatccccataagcccaagccccagatctactccatctggtacgctt
acgccccctacaacgtcaggtatatcctccagcccttcccccagacaccctaacacccaa
acctccacacctttacccctcctccccggctcccccagcactatggccagacggactgca
ctagctgcccggatgccctctagccctttctccctcctcttcttcgccctgtccgactta
cctcaggacagcagtgatgaagagctggaggaagaggaagaggaggatttttcaggggtt
cagtttgggtccagcctgggtgcgtccggaggggggatgactggtgactcaggtagtgac
cgctttaccatagagtcctgtaaagagacggagatgctcaactacctcatcgagcgtttt
gacagtgtgggaatggaagagaggaaggccccaaagatatgcagccaaccagctgtcagt
cagctgcttagcaacattcgttcccagtgcatttcccatgctgcactagtgcttcaaggt
gccctcacgcagcccagggcccctctacagccctccctgctggttccgtacatgctgtgc
cggaaccttccgtacgggttcatccaggagttggtgcgcatgactcaccaggaggaggag
gtgttcaaacagatctttgttcccattcttcaagggcttgctttagctgtaaaagaatgt
tcttttgacagtgacaacttcaagtttcctctgatggctttggctgagctctgtgaaatc
aagttcgggaagactcaccctgtatgcaatttgatcacctctctgccattgtggtgtcct
gaccctctcagtcctgggacaggaagagaaattcaaagactctccttcctcggagcattc
ttcagtctttctgtgtttgctgaggatgacactaaagtgggagacaagtacttctctggc
cctgccatcactatggagaacacccgtgtggtcagccagtcactgcagcattatctggag
tctgccaggggagatctgtttaaaatcctgcacaacatcttattgaatggagagacaagg
gaagcagctttgagctacatggcagctctggtgaatcgtaatgtgaaaaaggctcagatg
cagaccgatgataagctggtgtccacagacggcttcatgatgaacttcctgtgggtgctg
cagcaactcagtatgaagatcaagctggatacggttgattctctctacatcttccacccc
aagtgtcggctgaatctcagccgagaagagacccggctcaatgccacgatggaggacctg
aagagctggctcgctgagctgcatgaagacccgaccaagttctcagagccaaagttccct
acagagtgcttcttcttaacgctacacgcacatcatttgtccatcctcccgtgctgtcgg
cgctacatacggagactgagggccatcagggatctgaacagaactgtggaggagctaaag
aacagtgagaaccagtggaaggaatccccgttggctaatcgtcatcgggagatgctgaag
agatgtaaaacacaactgaagaaactcgtgcgctctaaagcctgcgcagacgcagggctg
ctggacgagaacctgctgcgcagatgtcttcagttcttcagtatggtcatccagctcatc
ttgcgtatggtggagcctgccttcccacatgtaaccctgcctctgaatccagaaattccc
aaaaactttgcagcactgcctgagttttacattgaagatgtggctgagttcttgcttttt
attgtgcagtactttccccaggttctctatgagccatgcactgaagacattgtgaccttc
ctggtagtcttcctttgcagtcagaattacataaagaacccatacttgattgccaagctg
gtggaggtgctcttcgttaccaacccagcggtgcagccgcgcactcagcgtttctttgag
atgatggagagccacccactgtctgtcaatcagcttgtgcccgccctcatgaagttctac
acagatgtggagcacactggagccacaagcgagttctatgacaagttcaccattcgttat
cacatcagcaccatattcaaaagcctgtggcaaaacattaaccaccaaggcaccttcctg
gaggagttcaactccggtaaacagtttgtgcgctacatcaacatgctaattaacgataca
acttttctgctggacgagagtttggagtctttgaaacgcatccatgagatccaggaggag
atgaagaataaagagcaatgggaccagctgcccagggagcagcagcagagccgtcagtcc
cagctgactcaggatgagagagtatcacgatcctacctggctttagccacagagacagtg
gatatgttccatatcctcaccaaacaggtccagaagcccttcctcaggcctgaactgggt
cctcgtctggctgccatgttgaattataacctgcagcagctatgtgggcccaaatgtcga
gacttgaaggtggaaaacccagaaaaatacggttttgagccaaagaagctcctggatcag
ctcactgatatctacctgcagctggactgtgcccgatttgctaaagccattgcagatgac
cagcggtcatacagcagggagctctttgaggaggtcatttccaaaatgagaaaggcgggc
atcaaatccaccattgctattgagaaattcaaacttctgttggagaaggtggaggagata
gtagctcgcaattcacagtctgagatggattacagcgacgccccggatgagtttaaagat
ccgctgatggacactcttatgactgatcccgtgcaacttccatctggcaacatcatggac
cgatccatcattctgcgacacctcctgaactctcccaccgaccccttcaacagacagcct
ctcacagagagcatgctggaaccagtcccagagctgaaggagcgtatccaggcctggatg
agagagaagcagactggtcgcttttga
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integrated database retrieval system
