Ctenopharyngodon idella (grass carp): 127504448
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Entry
127504448 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: calsyntenin-1
KO
K22659
calsyntenin 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127504448
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Cadherin related
127504448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_3
CDC45
Laminin_G_2
TylF
Cadherin_C_2
PRIMA1
EphA2_TM
TMEM132_C
PFF1_TM
FAM176
Motif
Other DBs
NCBI-GeneID:
127504448
NCBI-ProteinID:
XP_051734969
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All DBs
Position
22:complement(19922221..19969443)
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AA seq
979 aa
AA seq
DB search
MRIRGVKPFASAVGLLLGLLCAVEAAKVNKHKPWIETTYHGLVTENDDKVLLDPPLIALD
KDAPLRYAESFEVTFTKEGEICGFRIHGQNVPFEAVVLDKSTGEGVIRAKDKLDCELQKE
HTFTIQAYDCGEGPDGGNMKKSHKATVHIQVNDVNEYSPVFKEKSYKATVIEGKKYDSIL
KVEAVDADCSFQFSQICSYEIVTPDVPFTIDKDGNIKNTEKLNYSKERMYKLTVTAYDCG
KNRASEDVLVKINIKPTCKPSWQGFNKRIEYEPGTGSLALFPSMHLETCEEPITSIQASI
MLETNHIGKGCDRDTYSEKSLHKLCGASTGTVELLPAPSNSANWTVGLPTDNGHDSDQVF
EFNGTQAIKVPEGVVSTTLKEPFTISVWMRHGPGSREKETILCNSDKTEMNRHHYSLYVH
NCRLVLLLRQEPTESENYKPAEFHWKLDQVCDKEWHHYVLNIEFPAVTLFVDGATFEPFL
VTEDYPLHASKIETQLTIGACWQDLSGHDNDTETLSEPLTGGSARMTQYFRGNLAGLMIR
SGKLENKKVIDCLYTCKEGLDVQLPEEVASAVKVEFNPNQSSLSLEGDDIESFEKVMQHI
SYLNSRQFPTPGIRHLRVTTTVKCFNEETCISVPDSEGYVMVLQPEEPKISLSGIDHFAR
GAAEFESTEGVTLFPELRIVSTITREVEVEAETEAEGEDDPTVQETVVSEEIMHNLDTCE
VTVVGDDLNGDHESLEVDLAQIQQRALEMSSSNVGMVITGVNTMANYEQVLHLIRYRNWH
TEALFDRKFKLVCSELNGRYISNEFKVEVNVIHTANPMDHANNAMVQPQFINQVQHASVD
LSGHNLANTHQASVVPSAATIVIVVCVSFLVFMIILGVFRIRAAHQSTMRDQENGKENEM
DWDDSALTITVNPMETYEDQHSSEEEGDEEEEESEDGEEEDDITSAESDSSEDEGGEQED
QQGSSRQQQLEWDDSTLNY
NT seq
2940 nt
NT seq
+upstream
nt +downstream
nt
atgcggatccgtggggtgaaacctttcgcttctgcagtcggtctgcttttaggactatta
tgcgcggtggaggcagccaaagtaaataagcacaagccatggattgagaccacgtatcat
ggtctcgtaacggaaaatgacgacaaggttctcctggaccctccgctgatagccttggat
aaagatgccccgttgcgctatgcagagagttttgaggtgaccttcaccaaagaaggggag
atctgcggcttcaggattcacgggcagaatgtgccgttcgaagcagtggtgttggataag
tccaccggggagggtgtgatccgggctaaggataaactggattgtgagctgcaaaaggag
cacactttcaccatccaggcctacgactgtggagagggacctgatggcggcaacatgaag
aaatctcacaaggctaccgtccacatccaagtgaatgacgtgaatgagtactctccagtg
ttcaaagagaagtcctacaaagccacagtgattgagggcaaaaagtacgacagtatcctg
aaggtagaggccgtggacgctgactgctctttccagttcagtcagatctgcagctatgag
attgtcactcccgatgtgccctttaccattgacaaggatggtaacatcaagaacacagag
aagctgaactacagcaaggaacgcatgtacaaactcaccgtgactgcgtacgactgcggt
aaaaaccgggcatctgaggacgtccttgtcaaaatcaacatcaagcccacctgcaaacca
agctggcaaggatttaataaaaggattgaatatgagcctggtacaggaagtctagcactg
ttccccagcatgcacctggaaacctgcgaggagccaatcacctccattcaggccagcatc
atgctggagactaatcacatcggcaagggctgcgatcgagacacttactcagaaaaatca
ttgcacaagctctgtggtgccagcactggcactgtggagctgctacctgctcccagcaac
tctgccaattggaccgttggcttgcccactgacaacgggcacgacagcgaccaggtgttt
gagttcaatggcacccaggccatcaaggtccctgagggtgtggtgagcactaccctgaag
gagcccttcaccatctcagtgtggatgagacatggacctggaagcagggagaaggagacc
atcctctgcaactctgacaagaccgaaatgaacaggcaccactattcgctgtatgtacac
aactgtcgtcttgttctgctgctgcgtcaggaacccaccgagtctgagaattacaaaccg
gctgaattccactggaaactcgatcaagtgtgtgataaggaatggcatcactacgtgttg
aacatcgagttcccagcagtgactttgtttgtggatggtgccacctttgagcccttcctg
gtcacggaagattaccctctgcatgcctccaagatagaaacccagctcaccatcggcgcc
tgctggcaagacctctcaggacatgacaatgatactgagacactctcagagcctttgaca
ggtggcagcgcccgcatgactcagtacttccggggcaacctggcaggactcatgatccgc
tccggcaaactggaaaacaagaaggttattgactgcctgtacacctgcaaggaaggtctt
gacgtgcagcttccagaagaagtggcctctgctgtgaaggtggagtttaaccccaaccag
tcctctctgagcctggagggagatgacattgagagctttgagaaggtcatgcagcacatc
tcctacctgaactcccggcagttccccactccaggaatccgccatctgcgtgtcaccacc
actgtcaaatgcttcaatgaggagacgtgcatctccgtgccagactctgaaggctatgtg
atggttctccagccagaggagccaaagatcagcctcagtggaattgaccattttgcacgt
ggagcagctgaatttgagagcacggagggtgttacgctcttccctgagctgcgtatcgtc
agtaccatcactcgtgaggtggaggtggaagctgagaccgaggccgaaggcgaggatgat
cccacagtgcaagagacggtggtatctgaggagatcatgcataacttggacacgtgcgag
gtgactgtagtgggagatgatctgaatggagatcatgagagtttggaggtggatctggcc
caaatccagcagagagctctggagatgagctcttctaacgtgggcatggtcatcacaggg
gttaacaccatggcaaactatgaacaggtcctgcacctgatccgctacaggaactggcac
acagaggctctgtttgacaggaagtttaaacttgtctgctctgaactcaatggccgctac
atcagcaatgaattcaaagtcgaggtcaacgtgatccatacagcaaaccccatggatcat
gctaacaatgctatggttcaacctcagttcattaaccaagtacaacacgcttcagtggac
ctgtctggacacaacctggccaacacacatcaggcctcggttgtccccagtgccgccacc
atcgttattgttgtgtgcgtgagcttccttgtgtttatgatcatcctgggtgtgttccgt
atccgtgctgcccaccagagcacaatgagggaccaggaaaatggcaaagagaacgagatg
gactgggatgactcggccctaaccatcaccgtcaacccaatggagacttacgaagaccag
cacagtagcgaagaggaaggagatgaggaagaggaagagagcgaggacggagaggaggaa
gacgacatcaccagcgcagagtcagacagcagtgaagatgagggcggcgaacaggaagac
cagcagggttcgagcagacagcagcagctggagtgggacgactctaccctcaactactga
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