Ctenopharyngodon idella (grass carp): 127504920
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Entry
127504920 CDS
T08802
Name
(RefSeq) UHRF1-binding protein 1 isoform X1
KO
K28453
bridge-like lipid transfer protein family member 3A
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127504920
Membrane trafficking [BR:
cide04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
127504920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BLTP3A_B
VPS13_N
DUF7770
Motif
Other DBs
NCBI-GeneID:
127504920
NCBI-ProteinID:
XP_051736036
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All DBs
Position
22:complement(2388370..2428603)
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AA seq
1373 aa
AA seq
DB search
MAGIIKKQILKHLSRFTKNLSPDKINLSTLKGEGQLSNLELDEEVLQNMLDLPTWLAVTR
VYCNKAAIRIQWTKLKTSPICLFLDKVEVEMRTCEEPRPPNGPSPIAITAGQSEYGFAEK
VVEGMSVIINSITIKVQARAFHASFELWQLQGCSLNPKWQKTDLRHTRITHPKRGEVLTF
KEINWQSLRIEADAIESDEQDLGSTPLRLITNQGRIRIALKRRVKDCNVLASKLFFILDD
LLWVLTDSQLKAIIHYAKSLSEAMEKSAQQRKSMAAETLQTAPPSPGIHSLWTEPPPPEA
VGTHSTLAQYFDLHDVKESSYHTFISRLDLHICNDSCSDSDEAPPPGTQGAMQLTLRKLG
CDYYPFHRPGDGCRHWERHCGAMESRAQWAAKLLQEFQRRVEDLGIPGPHTEPNVSAKDS
PAKKVKADGESLSNFSPERTQTSRRTSAAAPSSGTPLKRLRSSCMVIRVDDLDIHQVSTG
GRHSKKTQSLLSCNRKSLHLPENTPAIHLQFTEYYFPDNPGLPVVLVPCSNLYAQLNGLQ
LCLDAPSVLWMTLFSRGLHRTLDQVKAFYHLQDSTKADEHIDIRLDATQLKLIIPLESSI
LDHPDRPQSLSISLPQIVLSNTRHSPHGSRSDLNSIYNSFSACPFFHPTACQPFPRDQSL
LHPLPSAFLQHFLENEFLSLEHKRPSRSQDVWSVSLSRVTLGFEGARRGLRGKALPFVEP
FAMSLWMCRPSAFKKDSRCSSIDADSKSPTGSRKHPLFDSPQGVNDVISDKVNQNEGLVN
SPLASIHILAQSITPVKMWLNHYQFVALLRMKDYLARLAGDLTKDFQGLGQSKHKSSDPP
SVCVSVLMEAIELALLLPPATCEPEEANSPVETDTPSLTDSDLSPSHHAGEPGLLEDSGT
GGNENQEDDAEQEGSVEEACEAIEEGMDGQTGQDGEAQAVVPVMSPLPDNPALLSRHSST
FSLEGELSSALNATKGVTKDAFTASMDLTKGALSITKDAFSILSRGSGMTKLFTPQNKEQ
SLRPEESSPSIMGNLRLQSMKQSPSQSSCDSAILEGSLADDGLSIDSDISENFVILMDSE
SGVESLRPNGTGVHSGSCVSPAPGTEGGSSADLSSSLSQSTEDIAQDMVSVLVLCLSRMG
CLTEMRGEDIVVALEAQELVPKQHGNHKVTDLLAGLTLTQAASSSSSAPLSPGPHSLSSP
PAASLRLEMGPRASRHSPLSESVGFMEMCLTGCRAELLASTLNTLGPFLEDELSADPQPM
RLWLRDTAITLKDDGPRVYPTAPQPVPVLFSLDGIMLERLDDGILCLRSAQSQSGIETEG
NRERDDQSSVRVEEKNKSLESKLMDVQSALEKALSDRERLLQEVRKHNPSFTL
NT seq
4122 nt
NT seq
+upstream
nt +downstream
nt
atggccggaatcattaaaaagcagatcctgaagcatctgtccaggttcactaagaacctc
tccccagataagatcaacctgagcacactgaagggagagggtcagctgtccaacctggag
ctggatgaggaagtgctgcagaacatgctggatctgcccacctggctggccgtcacccgt
gtctactgcaacaaggctgctatacggatacaatggacaaagttgaagaccagtcccata
tgtttgttcctggataaagtagaagttgaaatgagaacctgtgaggaaccgcggccccca
aacggcccttctccaattgccattactgcaggccaaagtgagtatggcttcgctgagaag
gttgtggaaggaatgtctgtgatcatcaactcaatcacaattaaagttcaggcccgagcg
tttcatgcctccttcgagctctggcagctccagggctgcagcctcaatcccaaatggcag
aagaccgaccttcgtcacacacgcattacacatcctaagagaggagaggtcctaacgttc
aaggagatcaactggcagagcttgcgcatagaggcggacgcgattgagagtgacgaacag
gatctgggcagcacaccgctgcgcctcattaccaaccaaggacgtatacgcatcgctctc
aaacgcagggtgaaggactgtaatgtcttggcctctaagctgttctttatactggatgat
ctgctgtgggtgctgacagactctcagctcaaggccattatccactacgccaagtcttta
agtgaggccatggagaagtccgcgcagcagaggaagagcatggctgctgaaacactacag
actgctcctccctctcctgggatccactctctgtggactgaacctcctccacctgaagcg
gtcgggactcacagcacactggcccagtattttgacctccatgatgttaaagaatcatcc
taccacactttcatctcccgtcttgacctgcatatctgcaacgacagctgttcagattct
gatgaagctccgcctccaggcacgcagggtgcaatgcagctgaccctccggaagctgggc
tgtgattactaccctttccatagaccaggtgatggctgtcggcactgggagcgtcactgc
ggagcgatggagtctcgtgctcagtgggcggccaaactgctgcaagaatttcagaggagg
gtggaggatctgggcatccctggacctcacacagaaccaaatgtgtctgctaaagactct
ccagccaaaaaagtcaaggcagacggggaatcactgtccaatttcagtcctgaacggact
cagacctcacggcggacatcagcagccgccccgtcctcaggaaccccactgaagagactt
cgctccagctgtatggtgatccgtgtggacgatctggacatccatcaggtgtccaccgga
ggccgtcacagcaagaaaacgcagtctctcctctcctgcaaccgcaaatccctacatctt
ccagaaaacactcctgcaattcaccttcagttcactgaatactacttccctgataaccct
ggacttcctgttgtgttagtaccctgctctaatctttatgcccagctgaatggtctgcag
ctgtgtctagatgctccaagcgtcttgtggatgactctgttttcacggggtctacacagg
acactagatcaggtcaaagccttttaccacctccaggacagcaccaaagcagacgaacac
atcgatatccgcctggatgcaacacagctgaagctgatcattcctctggaatcctccatt
ttggatcacccagatcgccctcagtcactaagcatcagtcttcctcaaattgtcctcagc
aacacgcgtcactctcctcacggctcccgttcggacctcaatagcatttacaacagcttc
tccgcctgtcctttcttccatcccacagcttgccaaccgttccctcgcgatcagagcctc
ctacatcccctgccatcagcattccttcaacactttctagaaaacgagttcctatcatta
gagcacaaacgtccctctcgctctcaggatgtctggtctgtcagtctgtcccgagtgact
ctaggctttgagggggctcgtcgagggctcagagggaaagcccttcccttcgtggagccc
tttgccatgtctttgtggatgtgccgcccttctgccttcaaaaaagattctcgttgttca
agcatagatgccgattcaaaatctcccaccggttctagaaaacatcccctctttgactca
ccacagggtgtaaatgacgtcatatctgacaaagtcaaccagaacgagggtctagtcaac
tctcccttggcctccatccatattttggcccaatcgatcactcctgtcaaaatgtggctc
aaccactaccaatttgtagcccttttgcggatgaaggactaccttgcccggcttgctgga
gatttgaccaaggacttccagggtttgggacaatccaaacataaatcatcagatcctcct
tcagtttgtgtctcagtcctgatggaggcgattgagcttgctctactgcttcctcctgca
acgtgcgagccagaagaagccaattctccagtggaaacagacactcctagcttgacagac
tctgatctctcgccatcacaccatgctggtgagcctggcctgctggaggacagtgggaca
ggagggaatgagaatcaagaagatgatgctgagcaggagggttcggtagaggaggcttgc
gaagccattgaagagggaatggatggacaaacggggcaggatggtgaagctcaggccgtt
gttcctgtcatgtctcctctgccagacaaccctgcattactgtcccggcatagctccact
ttcagcttggagggggagctatccagtgccctgaatgccaccaaaggggtcaccaaagat
gcattcaccgcctccatggatctcaccaaaggggcactgtccatcacgaaagatgccttc
agcatcctgagccgaggttctggcatgactaaactcttcactcctcaaaacaaggagcaa
agtttacggccagaggagtccagtccctccatcatggggaatttacggcttcagtccatg
aaacagtcgccttcccagagttcctgtgacagtgccattttagagggtagtctggcggac
gatggcttatccattgacagtgacatcagtgaaaactttgtcattctaatggactctgag
tctggtgtagagtctttgcgtcctaatggtacaggtgtccactcgggcagctgtgttagt
cctgctccaggaacagaaggcgggtcatcggcagacctcagcagctctctgtcccagagc
actgaagacattgcccaagatatggtgtctgtgttagttctgtgtctgagtcgaatgggg
tgcctgacagagatgcgcggtgaagatattgtcgtggcgctggaagcacaggagcttgtg
cctaaacaacatggcaaccataaagtcacagacctgctggctggactgacactgacacag
gctgcttcttcctcttcaagtgctccactatctccgggcccccactccctctccagtccc
ccggcagcgtccctcaggttggagatggggccgcgtgcgagcagacactctcctctgtcc
gagagcgtggggttcatggagatgtgcttgacagggtgcagagcagagctcctggcttct
accttaaacacactgggacccttcctagaggatgagctcagcgcagacccccagccaatg
agactgtggttacgggacactgctattacactaaaggatgatggtcctcgtgtctaccca
actgctcctcaaccagttcctgtgctcttctctctggacggcattatgctggagcgtttg
gatgatgggatcctctgcttgagatctgcacagagccaatcagggattgagacagaaggg
aacagagagagagatgaccaatcctccgttagagttgaggagaagaacaagtctctggag
tccaaactcatggacgtccagtcagctcttgagaaagctctgtctgaccgagagcgcctg
ctacaggaagtcaggaaacacaacccctccttcaccttatga
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