Ctenopharyngodon idella (grass carp): 127505027
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Entry
127505027 CDS
T08802
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127505027
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127505027
Cell adhesion molecules [BR:
cide04515
]
Immunoglobulin superfamily
L1 family
127505027
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
ig
Ig_2
Bravo_FIGEY
V-set
Ig_4
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
A9CJY8-like_N
Syndecan
Herpes_gE_N
Orf78
DUF3792
Motif
Other DBs
NCBI-GeneID:
127505027
NCBI-ProteinID:
XP_051736228
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Position
22:complement(9289504..9306372)
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AA seq
1179 aa
AA seq
DB search
MLYTAAMRALKCWRIPAILTILQQTWIFALEIPPEVRQPPMIIKESVQDHIVDPVDPIIV
ECEATGNPPPVFTWTRDGVYLNVARDPQVSMRRRSGTLEIFFWGRPDDYEGIYQCTATNE
FGSALSSHIHLRVSKARTWLKEYLEPVSVVVGLPLILPCNPPVGPPKPDTYWLNSTMTPI
RQDRRVSKAENGDLYFSSIVAEDALTNYVCVARFPFTNTIQQKPPLILQVLTARMAAHTA
PKFLKPKGTVSTTIAMLGEELVLECFAAGVPTPSIKWTKDWEEMSMTGKKLENFNKTLRI
KKISMDDGGDYICTASNRMGSLDHVITVRVKSVPFWVEKPESLVLSRDDSGSIVCRADGI
PRPQIQWLVNGEPISDAPKSPGRQVSGDTLIFGGVVPDSAAVFQCNASNQYGYIMANAFL
AVMDMKPRLLGPRDELVKTTEGNNTHLDCPYFGSPKPALRWSKGGLGTLEGNRYEILPNG
TLEIRNTKLQDQGAYVCVASNVIGRDEKEVQLEVKEPIKIVRAPHNTVVIRGSLARFDCK
IKFDPTLDVTVTWLKDKKFLILGRRMTKDEDSLSIADVYRRDEGVYTCRVKSELEEVTAS
AKLIVMDRPDPPSDLEISDPSERSVRLTWIPGLSNHNPIKEYLVQYTEDLLADYWLIPSG
WKNLTSYPGNLNSVVLQLTPFVEYRFRVIAVNGIGPSKPSWPSAYYQTGGAVPDAIPRNI
QGLGSGVFRNNMEISWEPLEYREWNGPKLGYMVWWRRRDSREEWKNYTTYWWCSYIIYDT
DTFTPYEIKVQAINFFGYGPESPVVIGYSGEDRPVAAPSDLAVSDIESTKLTVNWEPVAR
ADIMGEIKEYKVYYWRESSRLPWHIVSRRIKTKSFKANGPRLSGTLTGLVPYSNYRMYIV
VANNRYEGPPSNTIEFQTPEGVPTVPRSFRIMHRHYDTIYLDWEEPAEPNGILTGYILKY
QMLNITLGDKIQVEYIPPNITYFSLRRLDRYTRYKFSLAAQTEAGVGEAFTEESPHFTTE
EYTREQVDIVTQGWFIGLMCAVALLVLIMLIVFFIKRSRGGKYPVRDKKDFALEPMDDRE
NGTFDYRSLERIARVSTMPYSRREEESRQGRSQGAIEHIGRRTNSDDSLMEYGEGEEIEF
NEDGSFIGEYTGVSKRNIDRSPYHDSSEPTSPVAIYSFA
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atgctgtacacagcagcgatgagagctctgaagtgttggaggattcctgccatacttacg
atcctacagcaaacatggatttttgctttggaaattcctcctgaggtaaggcaacctcca
atgatcattaaagagagtgttcaagatcacatagtagatccagttgaccccattatagtg
gagtgtgaggcaaccgggaatccacctccagtgttcacatggacacgtgatggggtttac
ctgaatgtggcacgggatcctcaggtcagcatgaggcggcgttctggcacattagagatt
ttcttctggggtcgccctgatgactatgaaggcatctatcagtgcacagcgactaatgag
tttggctctgctctgtccagtcacatccatctgcgtgtctccaaggcccgtacttggttg
aaggagtatctggagccagtctcagtggtggtaggacttcctctcatccttccctgcaat
cccccagtaggccctccaaaacctgacacctactggctgaacagcactatgacgccaatc
cggcaggatcgtcgagtatcaaaggcagagaatggagatctgtatttctccagtatcgta
gcagaagacgctcttacgaactacgtatgtgtcgcccgcttccccttcacgaacaccatc
cagcagaaaccgcccctcatcctgcaggtgctcacagctcgcatggcagcccatacggca
cccaagtttctgaaacccaaaggaactgtcagcacaacaattgcaatgctgggggaagaa
cttgttttggagtgttttgctgctggagttccgactccctccatcaaatggactaaagat
tgggaggagatgtctatgactggaaagaagttggagaattttaataagactcttagaata
aagaagatctccatggatgatggaggagactacatctgcaccgcttcaaacaggatgggc
agcctggaccacgtcatcactgtcagggtcaaatcggttccgttctgggtggagaagcct
gagagtctggttctgtctcgtgatgacagcggtagtatagtgtgtagagctgatggtatt
cctcgaccccagatacagtggctggtcaacggagagccaatcagtgatgctcctaagagt
ccaggcaggcaggtttcaggagacactttgatttttggtggcgtggttccagacagcgct
gctgtgttccagtgcaatgcttcaaaccagtatggctatatcatggcaaatgctttcttg
gccgtaatggatatgaagcctcgtctgctgggtcccagagatgaactggttaaaacaaca
gaaggcaataatactcatttagactgcccatattttggctctcctaaacctgccctacgg
tggtcaaaaggaggactaggtaccttagagggaaatcgttacgagattcttccaaatggt
acattggaaatcagaaacacaaagctacaagatcagggagcatatgtgtgtgttgcaagc
aatgtcattgggcgagatgagaaggaggtccaactagaggtcaaagagcccattaaaatt
gttcgcgccccacacaatacagtagtcataagagggagtctggctcgctttgattgtaag
attaaatttgacccgactctggacgttaccgttacttggcttaaggacaagaagttcttg
atcttaggaagaaggatgacaaaggatgaggattctctgagcattgctgatgtgtacaga
agagatgaaggcgtctacacctgcagggttaaaagtgaactggaggaggtcactgcctcg
gccaaactcattgtgatggaccggccggacccgcccagtgatttagagatatcagaccca
tcagaaaggagcgtcagactcacctggattccaggactgagcaaccacaatcctattaaa
gagtacctggttcaatatactgaagatctccttgcagactattggctaataccgagcggc
tggaagaacctgactagttacccaggcaacctgaactctgtcgttttacagctaacacca
ttcgtagagtaccgattccgggtcattgctgtaaatggcatcggacccagtaaacccagc
tggccatctgcatactaccagactggaggagctgtgcctgatgccattccaagaaacatc
caaggattgggaagtggagtgttcagaaataacatggaaatcagctgggagccattggag
tacagagaatggaatgggccgaaactgggctatatggtttggtggagacggagagattca
agggaggagtggaagaactacacaacatactggtggtgtagctacatcatctatgacact
gataccttcacgccctatgaaattaaagttcaggccatcaacttcttcggctatggccca
gaatcccctgttgtgattggttactctggggaggaccgtcctgttgccgctccatctgat
ctggcggtgtcggacattgaaagcacaaagctgacagtcaattgggaaccagtggcacga
gccgacatcatgggtgaaataaaggagtacaaagtttattactggagagagagcagtcgt
ctgccctggcacattgtgagcaggaggattaagaccaagagttttaaagctaatggaccg
cgtctgtctgggaccctgactggtcttgtcccatatagtaactacaggatgtatattgta
gtggccaataaccgctacgagggtccacccagcaacaccattgagtttcagacacctgaa
ggagtgcccacggttcccaggtcgttcaggatcatgcaccggcactatgacaccatttat
ctagactgggaggaacctgcagaacccaatggcattctgactgggtacattctcaaatat
cagatgttgaacatcactctgggggacaaaatccaagtggaatacattcctcctaacatc
acgtacttctctttgcgccgtttggaccgatacactcgatacaagttctcactggcagca
caaaccgaggctggagtcggggaggcattcacagaggaatcaccccattttacaactgag
gaatatacccgggagcaagtggacattgtgacgcagggttggttcattggcttaatgtgt
gcggttgctctcctcgttcttatcatgctcatagtctttttcatcaagaggagccgagga
ggaaagtacccagtgcgcgacaagaaggactttgcactggagccaatggatgatagagag
aatggaacgtttgattacaggtctctcgagaggatagcacgagtgtccaccatgccctat
agcagacgtgaggaggaaagtcgacaggggcgcagtcagggtgcgatcgagcacattggc
aggagaacgaacagtgacgacagcctcatggagtacggtgagggggaagagatcgagttt
aacgaggatggctccttcatcggagagtacactggtgtcagtaagaggaatatcgacagg
agcccgtaccatgacagctctgagcccacgtctcctgtggccatctactcttttgcttag
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integrated database retrieval system