Ctenopharyngodon idella (grass carp): 127505031
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Entry
127505031 CDS
T08802
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127505031
Spliceosome [BR:
cide03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
127505031
Other components
Complex C specific factors
127505031
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Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
127505031
NCBI-ProteinID:
XP_051736241
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Position
22:9324108..9330343
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AA seq
833 aa
AA seq
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MSMSHLYGRRGEEEEEDGVEIEKFEVTEWDLANEFNPDRRRHRQTKEEATYGIWAEHDSD
DERPSFGGKRSKDYTAPVNFVSGGLRKTAAEEKVEQEGSDNSNDGGDAPPPPRTAAPKKL
QTGGSFKTSQRFAGGIRTGQDLGSWEKHTRGIGQKLLQKMGYVPGKGLGKNAQGIVNPIE
AKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEQEFQKELGQWRKDPGTAKKKPRYSY
KTVEELKAHGKLANKNMSRPAGELAQVKVIDMTGREQKVYHSYSHMSQKHSVPEEAPLSV
STREQKSSGFSLPELEHNLKLLIELTEQDILQSARRLQHEKDTVVTLTHESDALQVRLAE
EEESLGRLEQVMNLVESFEAGDMEGSPALSLQECAMVFQRLQTEFYQEYKTLGLGDLAVS
VVHPLLKEKLRSWDPLKDCSDGLEEVGQWRAILESSQSLHGGPDASNMDPYHRLIWEVWV
PVMRTCVSQWQPRNVGPMVDCVECWAPVLPLWILDNVLEQLIFPRLQREVDNWNPLTDTV
PIHSWIHPWLPLMQTRLEPLYAPIRSKLAHALQRWHPSDSSARLILQPWRDVFTPGAWEA
FMVKNIVPKLALCLGELVVNPLQQLLEPFNWVMDWEGMLSVSTMVGLLDKNFFPKWLQVL
CSWLSNNPNYEEITKWYLGWKGLLSENLLSHPLVKEKLNEALDIMNRAVASGLGGYMQPG
ARENIAYLIQTERRKDFQCEPQPERREVENSATRPPGTAAVPTSVPTNFKDLVQAKAEEN
GIVFMPLVAKRHMGKQLFTFGRIVIYIERGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgtctatgtcccatttgtatgggcgtagaggtgaggaggaggaggaggatggtgtggaa
attgaaaagtttgaggtgactgagtgggacttggccaatgagttcaacccagacagacgc
agacacagacagactaaagaagaagccacttatgggatttgggcagagcatgactctgac
gatgagcggcccagctttggggggaaaagatcgaaagactatacagctcctgtgaacttt
gtgagtggtggcctgcgaaagactgcagctgaggagaaagtggagcaggagggttcagat
aactccaatgatggtggagatgcacctcctccacctcgcactgcagctcccaaaaagctc
caaacgggtgggagctttaagacatcccagaggtttgcaggtggtattagaacagggcag
gacctgggatcctgggagaaacacacacgaggcattggtcaaaaacttctgcagaagatg
ggttacgttccaggaaaaggattgggcaaaaatgctcagggtattgtgaatccgattgag
gctaaggtgcggaaggggaagggagcagttggtgcgtatggtaatgagaggacccagcag
tcactgcaggatttccctgttgtagactctgaggaggaggaggagcaagagtttcagaag
gagctggggcaatggcgtaaagacccgggaacggcaaagaaaaagcccagatattcttac
aagactgtggaagagctgaaagctcatggcaaactggccaacaagaacatgagcagacct
gctggagaactggctcaggtcaaggtgatcgatatgacaggcagagagcagaaggtgtat
catagctacagtcatatgagtcagaagcacagtgttcctgaggaggcccctttgagcgta
agcacacgagagcagaagagctccggcttctctctcccggagctggaacacaacctcaaa
ctgctcattgagctcacagagcaagacatcctacagagtgcacgacgtctgcagcatgag
aaggacactgtggtgaccctgacccatgagagcgacgccttgcaggtcaggctggcagag
gaggaagagtctcttggtcggctagagcaggtgatgaacctggtggagagctttgaagca
ggcgatatggagggaagccctgcgctcagccttcaagagtgtgctatggtcttccagcgg
ctgcagacagagttctatcaggagtataagactttgggtttgggagatctagctgtgtct
gttgtgcatcctctattgaaagagaagcttcgcagctgggatccacttaaggactgttca
gatggtttagaggaagttggtcagtggagggccattcttgaaagctcacaatctcttcac
ggtggaccagacgcttctaacatggacccctatcacagattgatatgggaagtctgggtt
ccagtcatgaggacctgtgtgtcgcagtggcagcccagaaatgtggggcccatggtggac
tgtgtggagtgctgggctcctgtattaccgctgtggattctggacaatgttttggagcag
cttatattcccacgactacagagagaggtggacaactggaacccactgaccgacacagtg
ccaatccattcatggattcatccctggctgcctctgatgcaaacccgtcttgagccgctg
tacgcccccatccgcagtaaactagctcatgctttgcagcgctggcaccccagcgactcc
tccgccagactgattctgcaaccctggagagatgtcttcacacctggtgcctgggaggct
ttcatggtcaaaaacatcgtccccaagctggctctatgtttaggagagctggtggtgaat
cctcttcagcaactgctggagccgttcaactgggtgatggactgggaggggatgctctct
gtctctaccatggttggactgctggataagaatttcttccccaaatggctacaggtgttg
tgttcctggctcagtaacaacccaaactatgaggagatcactaaatggtatctgggctgg
aagggcttactctcagagaacctgctcagtcacccattggtcaaagaaaaactgaatgag
gcccttgacattatgaatcgtgccgttgcctctggactaggtgggtatatgcaacctgga
gcaagagagaacattgcatatctgattcagacggagagaaggaaagatttccagtgcgag
cctcagcctgagcgccgtgaagtggagaattctgccacacggccaccaggcaccgcagcg
gtaccaacgtctgtacctaccaactttaaagatctagtccaggccaaggctgaggagaat
ggcatcgtcttcatgccactggtagccaaacggcatatgggaaaacagttgttcacattt
ggcagaatagtcatctacattgagcgtggagtggtctttgttcaaggcgagaaaacctgg
gttccaacatcactacagagtctaattgacatggccaaatga
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