Ctenopharyngodon idella (grass carp): 127505091
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Entry
127505091 CDS
T08802
Name
(RefSeq) laminin subunit beta-2 isoform X1
KO
K06243
laminin, beta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127505091
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Alanine_zipper
EzrA
Motif
Other DBs
NCBI-GeneID:
127505091
NCBI-ProteinID:
XP_051736343
LinkDB
All DBs
Position
22:7965968..8006175
Genome browser
AA seq
1795 aa
AA seq
DB search
MSISFISVSLKVLSTASAQEPDHAHGCTHGSCYPATGDLLVGREMNLKASSTCGLRRREL
YCIVSHLQEEKKCFHCDSRRPYDPYSNPTSHRIENVITTFKPHRKKSWWQSENGKSDVYL
QLDLEAEFHFTHLIMTFKTFRPAAMLIERSADFGRTWQVYRYFSSDCESNFPGISQSPLR
KVDDVICESRYSDIEPSTEGEVIYRVLDPAIRIEDPYSPNIQNQLKITNLRLNFTKLHTL
GDNLLDSRPEIKEKYYYAMYELVVRGNCFCYGHASECAPIDGIRDDIEGMVHGRCVCKHN
TNGLNCEQCDDFYNDLPWRPAEGRNTNACKKCNCNGHSNKCHFDMAVYLATGNVSGGVCD
NCLHNTMGRNCETCKPFYYQDPMRDIRDPGVCVACDCDPDGSLNGGICDGHDDPSSRMIA
GQCRCKDNVEGPRCDKCKPGFFGLSASDPRGCQPCKCDPRGTVSGSSQCDPVSGDCFCKR
LVTGHSCNQCLPEHWALSHDAIGCRGCDCDVGGATDNQCSMETGQCHCRSHMIGRQCNQV
ESGYFFMALDHYIYEAENAKLGQGSAFEEREYQPGRPVLWTGTGFARAPEGGTLEFAINN
IPYSMEYDVLIRYELQMPRDWEEVRVMVIRPGPIPTSSPCGNTIPADDLLTVSLPSAARF
VVLPQTVCLERGVSYKLRVEFIRYADRNSILTSTNAFVLVDSIALLPRYSSLEMFTAGDP
ASVTRKQSYERYRCHETAKSVSRPQMSEVCAKLITSMSALINDGALPCECNPQGSLSSEC
DVRGGQCRCRPNISGRRCDKCAPGAYGFGPSGCKLCECSLEGSQSRFCDQYTGQCPCRPG
AFGQRCDGCQAGHWGFPNCRSCQCNGHADECHQRTGACLNCRSNTAGDQCERCANGYYGN
PALGLGSQCRPCPCPEGPNSGRNFAASCYQDNRNQQVVCNCNQGYTGIVKRSAGAVLKRP
RCEECAPGYYGDPSKPGGQCQPCRCSNNIDLSDPEACDKRTGQCLKCLYNTEGPDCSVCK
SGYYGDASRRNCRKCTCNFLGTERSQCLSRDDCVCQRATGQCQCLPHVIGQTCDHCAPNY
WNLASGRGCEPCGCDPNNAYTSACNEFTGQCQCRVGFGGKTCKDCQENHWGDPRVLCRAC
DCDPRGIESSQCNRVTGHCVCQQGVSGVRCDQCARGFSGTFPDCKPCHQCFGDWDRIVQD
LATRTKALTDRAKDLHTTGLTRAFERKFKELEDMLAQVRDIVNARNVTAEAVTILMGMIE
DLRAQIGETTDTLNQLEGDLTAVQDSNYEASNALSTLEREAKELNLNSDQLNRQLDILKN
SNFLGAYDSIRASYNKSRDAEHRANRSTSDIPSTVSQSADTRKKIERLITQKRDDFNRKN
AANKRTLTDLNAKAQNLDIKKINEKVCGAPGDAPCMDSPCGGAGCRDDEGKRHCGGLNCN
GAVAVANNALDRSKHAEKELDKAMGVVEELFKQVADAKTKAQEAKDRAQAALEKASDTKN
KVDHSNNDLRDLIKQIREFLMQEGADPDSIEAVANRVLELSIPASPKQIRHLADEIKDRV
KSLSNVDAILEQTQNDVRKAEQLLMDAKKARNKADGVKSTAESVKKALNDASRAQAAAEK
AIQKARNDIGLTQNQLVQIQSETTARERDLNDAMDRLGDLGRQIEALKTKRANNSLDAAR
AEETATMARDKANEAKAILDGELSDKYRTVQGLMDSKAKTMQDAKQKAERLREEAKELLK
DAQDKLQRLAELEKDYEENQKVLEGKARQLDGLEDKMKAILHAINKQIQIYNTCQ
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgtctatttcctttatctctgtttccttaaaagtcctgtcaacggccagcgcacaggag
cctgatcatgcccacggctgtacccatggaagctgttaccctgcaaccggcgacctcttg
gtggggcgggaaatgaacttgaaagcatcgtccacctgtggcttgcggaggagagaactc
tactgcattgtcagccatctgcaggaagagaagaagtgtttccactgtgattcacgacga
ccttatgatccttattccaaccccacaagtcaccgcatcgagaatgtcatcaccaccttc
aaaccacaccgcaagaagtcctggtggcagtccgagaatgggaagtctgatgtttacctt
cagctggacctggaggcagagtttcactttactcatctcatcatgacatttaagactttc
cgtccagcagccatgttgattgagcgatctgcagattttggccgaacctggcaggtgtac
cgttacttctcttccgactgtgagtccaacttcccgggaatttctcagagtcctcttcgt
aaggttgatgatgttatctgcgaatccagatattctgacatcgagccatcaacagaagga
gaggtgatttatcgtgtccttgaccctgctattcggatcgaagacccttacagccctaac
attcagaaccagctgaagatcactaacctccgtctgaacttcaccaagctgcacactctg
ggtgataatctgctggactcacggcccgagatcaaagagaaatactactatgccatgtat
gagctggttgtcaggggcaactgcttttgctatggccacgcctccgagtgtgctcctatt
gacggcatcagggatgacattgagggcatggtacatgggaggtgtgtgtgcaaacacaac
acgaatggactgaactgtgaacagtgtgatgacttctataatgacctgccctggagacca
gctgagggccgtaacactaatgcctgcaagaaatgcaactgtaacggtcactccaacaag
tgtcattttgacatggcggtgtatctggctactgggaacgtcagtggaggcgtgtgtgac
aactgtctccacaacaccatgggccgcaactgtgagacctgtaaacctttttactatcag
gatccaatgagagacatcagagaccctggggtctgcgtggcctgcgactgtgacccagat
ggttctctgaacggtggcatttgtgacgggcatgatgacccctcttcgcgcatgattgct
gggcagtgccgttgtaaagacaacgttgaaggcccacgctgtgataaatgcaagcctggt
ttctttggactcagtgctagcgaccctcgtggctgccaaccatgtaaatgtgaccccagg
ggtacagtgtccgggagctctcagtgtgaccctgttagtggagactgcttctgtaaacgc
ctggtcactggacacagctgcaaccaatgtctgcctgagcactgggccctgagtcatgat
gccattggctgcagagggtgtgactgtgatgtgggtggagctacagacaaccaatgctca
atggaaacagggcagtgtcactgtcggagtcacatgattggacgccagtgtaaccaggtg
gagtctgggtatttctttatggccctcgaccactacatctatgaggctgaaaatgccaaa
ctgggtcaaggctctgcatttgaggagagagagtaccagccaggccgtcccgtcttgtgg
acaggcactgggtttgcacgggctcctgaagggggtacgctggagttcgccattaacaac
attccatattctatggaatatgacgtcctcattcgctatgagcttcagatgccacgggac
tgggaggaagtccgtgtaatggtaattagaccaggccccatacctaccagcagtccatgt
ggaaacaccatccctgcagatgatctgctaaccgtatcgctcccctctgctgccaggttt
gtggttctgcctcagacggtgtgtttggagagaggagtcagttacaaactacgtgtggag
ttcatccgttatgctgacaggaacagcatccttacctccactaatgcctttgtacttgtt
gactctattgcccttctcccacgttactcttctctagagatgtttaccgcaggagaccct
gcctctgtcacgcggaagcagagctatgagcgttaccgctgccacgagactgccaagagt
gtgtcccgcccacagatgagtgaagtgtgcgctaaactcatcaccagcatgtctgccctc
attaacgacggcgcactgccttgtgagtgcaatcctcagggttcgctcagctcagagtgt
gatgtccgtggaggtcagtgccgctgcaggcccaacatatcaggccgccgctgtgataaa
tgtgcaccgggggcttatggctttggcccttccgggtgcaaactttgtgaatgtagtttg
gagggctctcagagccgtttctgtgaccagtacacaggacagtgtccatgccggcctggt
gcatttggtcagcgctgtgatggttgtcaggctggacactggggcttcccgaactgcagg
tcttgccaatgtaacggccacgctgatgagtgccaccagaggactggagcctgtctcaac
tgcagaagcaatacagcaggagaccaatgtgaaaggtgtgctaatggttactatggaaac
ccagcccttggtttagggagtcagtgtcgaccctgcccctgtcctgagggccccaacagc
ggacgcaactttgccgcctcatgttatcaagacaaccgcaaccaacaggtggtctgcaac
tgtaaccagggttacacagggattgtaaagcgctctgcaggggctgtccttaagcgtcca
cgttgtgaagaatgtgctcctggttattacggtgacccctctaagcccggtgggcagtgc
caaccttgtcgttgcagtaacaacatcgacctatcggatcctgaggcatgtgacaagcgt
actggccagtgtctcaagtgcctgtacaacactgaaggaccggactgcagtgtgtgcaaa
agcggatactatggagatgcttcccgccgcaactgccggaagtgcacctgcaacttcttg
ggcacggagcgtagtcagtgtctgtctcgagatgactgcgtgtgccagcgtgccacagga
cagtgccagtgtctacctcatgttattggacaaacttgtgatcactgcgctcccaactac
tggaacctggcaagtgggcgaggctgtgagccctgtggttgtgaccccaacaacgcctac
acatctgcctgtaatgagttcacaggccagtgccagtgccgtgttgggtttggaggaaag
acctgtaaagactgccaggagaaccactggggtgacccaagagtactatgccgagcatgt
gactgtgacccacgtggcatcgagtcatctcagtgtaaccgtgtgaccggtcattgcgtg
tgccagcagggagtgtcaggcgttcgctgtgatcaatgtgcccgtggcttctctggcacc
ttccctgattgcaagccttgccaccagtgctttggggactgggaccgcatcgttcaggat
ctagcaaccagaaccaaagctctcacagatcgagccaaggatctccacactaccggcttg
actcgagccttcgagagaaaatttaaagagttggaggacatgctggctcaggtgcgggac
attgttaatgcccgcaatgtcaccgctgaagctgtgaccattctgatgggcatgatagag
gatctcagagctcagattggtgagaccacagacacactgaaccagctggagggagacctg
actgctgtgcaggacagtaactatgaggccagtaatgcactaagtaccctggagagggaa
gcgaaagagctcaacctgaactcagatcagcttaaccgccaacttgacatcctcaagaac
tccaacttcttaggtgcatatgacagcatacgagcctcgtacaacaagtcacgtgatgca
gagcatcgtgccaacagatctacctctgacattcccagcacagtgagccaatcagcagac
acccgcaagaaaatagagcgactgattacccaaaagagagatgattttaaccgcaaaaat
gctgccaacaaacgtacactcacagacttaaatgcaaaagctcaaaatctggacataaag
aaaatcaatgaaaaggtatgtggagcaccgggtgatgctccatgtatggacagcccttgt
ggtggtgctggttgtcgtgatgatgagggcaaacgccactgtggaggtctgaattgcaat
ggagctgttgcagtggccaacaatgccctggatagatccaagcatgcagaaaaggaattg
gataaagctatgggagtggtggaagagctttttaagcaggtggcagatgctaagaccaag
gctcaggaagctaaggatagagcccaggcagctttggaaaaagctagtgataccaagaac
aaggtggatcattctaacaatgatctgagggacctcatcaaacaaattcgtgaattcctt
atgcaggagggggcagatcctgacagcattgaggcagtggccaatcgggtgctggagcta
tctatccctgcttctcccaagcagattcgacacctcgcagatgagattaaagaccgtgtc
aagagtctgtccaatgtggacgccattcttgagcagacccagaatgatgtccgcaaagca
gaacagctgctgatggatgccaagaaagccaggaataaggcagatggagtgaagagcaca
gctgagagtgtgaaaaaggccctgaacgatgccagcagggcccaggcagctgcagagaag
gccattcagaaagctagaaatgacattggcttaactcagaaccagctggtacagatccag
tcagagaccacagctcgtgagagagatcttaatgatgcgatggacaggctgggagatctg
ggacgccaaatagaggccttaaagactaaacgtgccaacaacagcctggatgcagcacgg
gcagaggagactgccaccatggcccgggacaaggccaatgaagctaaagcgatactggat
ggcgagctgtccgataagtaccgtactgttcagggtctgatggacagtaaggcgaagaca
atgcaggacgccaagcagaaagcagagcgcctgagagaagaagcgaaggagctgctaaag
gatgcccaggataaactgcagaggctggcggagcttgaaaaggactatgaagaaaaccaa
aaggtattggaaggcaaagccaggcagctggatggcctagaagataaaatgaaggcaatc
ctgcatgccatcaataaacagatacagatctacaacacctgtcaataa
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integrated database retrieval system
