Ctenopharyngodon idella (grass carp): 127505116
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Entry
127505116 CDS
T08802
Name
(RefSeq) NLR family CARD domain-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127505116
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127505116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
SPRY
LRR_6
LRR_4
FANCI_S3
SIR2_2
Motif
Other DBs
NCBI-GeneID:
127505116
NCBI-ProteinID:
XP_051736454
LinkDB
All DBs
Position
1:1791500..1804971
Genome browser
AA seq
1027 aa
AA seq
DB search
MSLHNERENEDSASKMSSSSPGSSCESTKSDQSMTTDPSISRRNRQRSGSPEPSGVSVRS
NISRDLPPVFRDGPVTSDQFFSKREIHEPIRSVPSFTSHYQTHIRQDKTEAVLEKHTLET
GDPQRVKDQHKTSMKNKYERLFEGNKLQENETFLNRIYTQLYIIEGEREGVNEEHEVLQM
EKTARTQHSQDTPVDCNDIFKASPELGCEEKDQIKTVLTKGIAGIGKTVSVQKFILDWAE
GKANQDVDFMFVLPFRELNLIRDHQYSLHRLLLDFHPELQDLDSKIYEECKVVFIFDGLD
ESRITLMFSDAQKVSDVTETSSVGVLMSNLMKGELLPSALIWITSRPAAANQIPSEYINR
LTDIQGFSEPQKEEYFRKRISDEHQASRIISHIRRAKSLHIMCHIPVFCWISSTVLQKLL
KEDLSVEIPQTLTEMYIHFLLIQINMRNQKYEERDPEKLLQSNREVIVKLAEVAFKQLMK
GNVMFYEEDLRESGIDVTDASVYSGICTEIFKEESVIHQRKIYSFIHLSIQEFLAAFYVF
YFHVTSIMEGLRNFASIQILLKGAVDEALKSKNGHLDLFLRFLLGVSLESNQTLLQDLLT
HTENSSESIRETTQYIKEKIKDGRGLSTERSINLFLCLLEVKDQTLSREIKEFVKSDKHS
EKKLSPAHCSTIAYMLQISEEVLDELDLKKYNTSDEGRRRLIQAVINCTKALFAGCNPSD
QHFEIVASALQTPNGFLRELDLSNNDLQDSGVKLLSDGLKSLNCQLEVLRLSGCMVTEEG
CGYLSSALSSNPSHLRELDLSYNHPGQSGVQLLNDRLNDPNCSLQLLNVDNGEHLRITPG
LRKYAGNLTLDPNTINTQLILSDEKRKIIHVTEPQSYPDHPERFDSCEQVLCEESLTGRC
YWEAEWSGKGAEIVVSYKGIRRKGVSDCWFGYNDKSWSLYCCANEFTIWHNNVSNNIAFP
LSSNRVGVYLDWLSGTLSFYSVSDTHTLTHLHTFNTTFTEPLYAGFAVYPESSASLCQIK
QHNVKNN
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccataatgagagagaaaatgaggactctgcctctaaaatgagttcttcatct
cctggatcaagctgtgagtctacgaagagtgaccaatccatgacaacagatcccagcatc
agcaggaggaatagacagagatcagggtctccagaacctagcggtgtgtctgtgaggagt
aatatatcaagggatcttccccctgtattcagagatggaccagtgacctctgatcaattt
ttcagcaagcgagaaatacatgagccgatcagatctgtgccatcctttacatcccactat
cagactcacatcaggcaggacaaaactgaagcagtcctggagaaacacacactggagact
ggagacccgcaaagagtcaaagaccagcacaaaaccagcatgaagaacaaatatgaaaga
ttatttgagggaaacaaactccaagagaatgaaaccttcctgaaccggatctacacacag
ctctacatcatagagggagagagagaaggagtgaatgaagaacatgaggttttacagatg
gagaaaacagccagaacacaacactcacaagacactccagttgactgcaatgacatcttt
aaagcctcacctgaactaggatgtgaggagaaagaccaaatcaagactgttctcactaaa
ggcatcgctggaatcggaaagaccgtctctgtgcagaagttcattctggactgggctgag
ggaaaagccaatcaggatgtagatttcatgtttgtgcttccatttcgagagctgaacttg
atccgagatcatcagtacagtcttcatagacttctcctggactttcatcctgaacttcag
gatctggactcaaagatttatgaggagtgtaaagttgtattcatctttgatggtctggat
gaaagcagaatcacactgatgttttcagatgctcagaaagtttctgatgtgactgagact
tcatcagtgggtgtgttgatgtcaaacctcatgaaaggagagctgcttccctctgctctc
atctggatcacctccagaccagcagcagccaatcagatcccctccgaatacatcaaccgt
ctgacagatattcagggattcagtgagcctcagaaggaggaatatttcaggaagagaatc
agtgacgagcatcaagccagcagaatcatctcacatatcagaagagctaaaagcctccac
atcatgtgccacatacccgtcttctgctggatctcatccactgtgcttcaaaagcttcta
aaagaagatctgagtgtagaaatcccccaaactctgactgaaatgtacatccacttcctg
ctgattcagataaacatgaggaatcagaagtatgaagagagagatccagagaaactcctg
cagtccaacagagaagtgattgtgaaacttgctgaagtggctttcaaacagctgatgaag
ggcaatgtgatgttctatgaggaggacctgagagagagtggcatagacgtcactgacgcc
tcagtgtattctgggatttgcactgagatctttaaggaggaatctgtgattcatcagagg
aaaatctacagcttcattcatctaagcatccaggagtttctcgctgctttctatgtgttt
tactttcatgtaacttcaattatggagggactgaggaattttgcttcaatacaaattttg
cttaaaggtgcagtagatgaagccctcaagagtaaaaatggacacctggatctgttcctg
cggttcctgctgggagtctcactggagtccaatcagacactcttacaggatctactgaca
cacacagagaacagctcagagagcatcagagaaaccacacagtacattaaagaaaagatc
aaagatggacgtggactctccactgaaagatccatcaatctgttcctctgtctgctggaa
gtcaaagatcagactctgtccagagagattaaagagtttgtgaaatcagacaaacactca
gagaagaaactctctcctgctcactgctcgacaattgcctacatgcttcagatttcagag
gaagtgctggatgagctggatctcaagaaatacaacacatcagatgaggggagaagaaga
ctgatacaagctgtgatcaactgcacaaaagccctttttgctggctgtaatccttcagat
cagcattttgaaattgttgcatcagctcttcaaacccctaacggtttccttagagagctg
gacctgagtaacaatgacctgcaggattcaggagtaaaactgctctctgatggactgaag
agtctaaactgtcagctggaggtactgaggttgtcaggctgtatggtgacagaggaaggc
tgtggttatctgtcttcagctctgagttcaaacccctcacacctgagagagctggatctg
agctacaatcacccaggacaatcaggagtccagctgctcaacgacagactgaatgatcca
aactgctcactgcagctactcaatgtggataatggagaacatttaagaatcacaccagga
ctgagaaaatatgccggtaatctcacactggatccaaacaccataaacactcaactcatt
ttgtctgatgagaagaggaagattatacatgtgacagagccgcagtcatatcctgatcat
ccagagagatttgatagctgtgagcaggttttgtgtgaagagagtctgactggacgctgt
tactgggaggctgaatggagcgggaagggtgctgaaatagtagtgtcatataaaggcatc
aggaggaaaggagtgagtgattgctggtttggatacaatgacaaatcctggagtctatac
tgttgtgctaatgaattcactatctggcacaataatgtgagcaataatatagccttccct
ttatcctctaatagagtaggagtgtatcttgactggttgtccggcactctgtccttctac
agcgtctctgacacacacacactcacacacttacacacattcaacaccacattcactgaa
cccctctatgctggatttgcagtttatcctgaatcttcagcatctctgtgtcagattaaa
caacataatgtgaaaaacaactga
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