Ctenopharyngodon idella (grass carp): 127505253
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Entry
127505253 CDS
T08802
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127505253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127505253
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
127505253
GBAF(ncBAF) complex
127505253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
127505253
NCBI-ProteinID:
XP_051736649
LinkDB
All DBs
Position
22:complement(23165819..23204203)
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AA seq
396 aa
AA seq
DB search
MSVTFSSVRPRGKAEVTQQTIQKMLDENHHLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPNINIGPGGMSQSGGGQSLHSQTNMNDSMGTGLPPTSLMQ
SQMNNGPSHAPMQQQPTISMSLPPSSHGTGPGYSHSVPSSQGAPLQGQVAYSSMASRANL
NMQSSQVSVMHQQGTGPHYSSTSAGGQHYQSQQTVGMMGQGNQGSSMMPQRPMGSYRAPQ
QGSAPQFMGQEEFYGEQYGHTQSSSEPVSQQFYSDGHGEYSYQQSSYGEQNYERSFDESS
QHYYEGNSQYSQQQTQYQQGSGQHQTLSQQQYPSQAAYTAQPQGYGPGQGSSSQYPQYQQ
GQSQQYPSYRSIQPGPAAQSQRPYSFEQGQYGNYQQ
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttacattttcatctgtccgtccgagggggaaagcagaggtcactcaacaaacc
attcagaagatgctggatgaaaaccatcatctgatacagtgcattatggactatcagagc
aaaggaaaaacagctgaatgtacacagtatcagcagatattgcacagaaacttggtctac
ctagcaacaatagcagactctaatcagaatatgcagtctctgctaccagcgcctcccaac
cccaatataaacataggtccaggtgggatgagtcagagtggtggaggtcagtctcttcac
tctcaaactaatatgaatgatagtatgggcactggcttgccacccacctcactaatgcag
agccaaatgaacaatggccccagccacgcccccatgcagcagcagcccaccatatccatg
agcctgccccccagcagccatggcacggggcctgggtacagccactcggtgccctcctct
cagggagctccgctccaaggtcaggtggcctattcatctatggcctctcgtgccaacctc
aacatgcagtccagccaagtttctgtaatgcatcagcaaggcaccggaccccattactca
tcgacctcggcagggggtcaacactaccagagtcagcagactgttgggatgatgggacag
ggaaaccaggggagcagcatgatgccacagagacccatgggaagttatcgtgccccacag
caaggatcagccccgcagttcatgggccaggaggagttctacggagagcagtatggacac
actcagagctccagcgagcctgttagccaacagttttactcagatggtcatggggagtat
tcctatcagcagtcttcttatggggaacagaattatgagagatcctttgatgagtcctca
caacactactatgaaggaaactctcagtacagccaacagcagacacagtaccaacaaggc
tctgggcagcaccagacattaagtcaacagcagtacccatcacaagcagcctacaccgct
cagcctcagggatacggtccagggcagggcagctcatcacaatatcctcagtatcagcag
ggccagagtcagcagtacccatcataccgctctatacagccaggaccagctgctcaatct
cagagaccctactcttttgaacagggtcagtatggaaactatcagcaataa
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