Ctenopharyngodon idella (grass carp): 127505315
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Entry
127505315 CDS
T08802
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127505315
Membrane trafficking [BR:
cide04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
127505315
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
ig
Ig_2
LRRNT
LRR_9
V-set
Motif
Other DBs
NCBI-GeneID:
127505315
NCBI-ProteinID:
XP_051736744
LinkDB
All DBs
Position
2:complement(41885952..41931434)
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AA seq
605 aa
AA seq
DB search
MASLWGLGQMWWLGLILALMAPPCTGCPPRCDCAAQLRSVSCQRKRLSGVPEGIPTETKL
LDLSRNRLRWVAPGDLAPYPRLEEVDLSENLITTIEPNAFASLQALRTLRLRGNQLKLVP
MGAFARLANLTTLDLSENKIVILLDYTFQDLRSLKNLEVGDNDLVYISHKAFSGLIGLED
LTIERCNLTSISGQTLSYLRNLVTLRLRHLSISALEDQNFRKLSALRGLEIDNWPYLEYI
SPLSFQGLNLSWLFITNTNITSVPSASFRNLAYLTSLNLSYNSISVLESWAFRDLIRLKE
LHMVSTNLLTVEPHALGGLRQIRVLNLSNNDLVTLEESSFHSVNSLETLRVDGNPLSCDC
RLLWILQRRRTLNFDGKMPVCAGPAEVQGYLLSTFTDSALFDYFTCQKPKIRNRKLQQVT
AHEGQPVSFLCRAEGEPTPAIIWISPQRRRITPKSNGRITVLPGGTLEIRYAQVTDSGTY
ICIASNAGGNDTYFATLTVKGQPVDSPLFSNRSLYAVDFNDTGLNSTRVFLKFTLDLTTI
LVSTAMGCITFLGVVLFCFLLLFVWSRGRGQRKNNFTVEYSFRKTEGPATTGASGGTRKF
NMKMI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttatggggcctgggccagatgtggtggctgggactgattctggccctgatg
gcccctccatgcacgggttgcccaccacgctgtgactgcgcggcgcagctccgctccgtg
tcctgccagcgaaagcgcttgtccggcgtaccggagggcatcccgacagagacaaagctg
ctggatttaagccggaaccgtttgcgttgggttgcaccgggagatttggctccgtatccg
cgtctggaagaggttgatctcagtgagaatctcatcacgacaatcgagcccaatgccttc
gccagcctgcaggccctgcgcacgctgagactcagaggaaaccagctgaagctcgtgccc
atgggagcgtttgcgcgactggcgaaccttaccacactggacctgagtgagaacaagatc
gtcatcctgctggactacaccttccaggatctgcgtagtctaaaaaatttggaggtgggt
gacaatgacctggtctacatctctcataaggctttctcaggattgataggcctggaagat
ctcaccattgagaggtgcaacctgacttccatatcaggccagaccctttcctatttgcgt
aacctcgtcaccctccgactacgccaccttagcatctctgctcttgaggaccaaaacttc
cgcaagctatctgcgctgagaggtcttgagattgacaactggccctacttggagtacatc
tcgccgctgagcttccaggggctcaatctctcctggcttttcatcaccaacaccaatatc
acctccgtgccgtccgcatccttccgaaatctcgcctacctgacgtctctcaacctttcc
tacaattccatctccgtgctcgagtcctgggcctttcgagacctgatcaggctgaaggaa
ctacacatggtcagcaccaatctgctcaccgttgaacctcacgctttgggaggtttgcgg
caaatccgagtcctcaatttgtccaacaacgacctagtcaccctcgaggagagttcgttc
cactcggtcaacagcctggagacccttcgggtggacgggaacccattgtcctgcgattgc
cggctgctttggatcctgcagcgcagacgtaccttgaactttgatggaaagatgcccgtg
tgtgccggaccggcggaggttcagggatatctgttgagcaccttcaccgattcggcgttg
tttgattatttcacctgccagaagccgaagatccggaaccggaagctgcagcaggtgacg
gcgcacgagggccagccggtatcgttcctgtgccgtgccgagggcgaaccgacaccggcc
atcatctggatctcgccgcagcggagaaggatcactccgaaatccaacggcaggattacg
gtgctcccgggcggaacgcttgagatccgttacgcccaggtcacggacagcggcacatac
atctgcatcgccagcaacgcgggcggcaatgacacctacttcgccacgctaaccgtaaaa
ggccaaccggtggactcgccgctcttctccaaccgctccttatatgcggtggacttcaac
gacaccgggctcaacagcacgcgtgttttcctcaagttcacgctggatttaaccaccatc
cttgtgtccacagccatgggctgcatcactttcctgggcgtcgtgctcttctgcttcctg
ttgttgtttgtgtggagccgtggccgcggccagcgcaaaaataacttcacagtggagtat
tccttcaggaagacagaaggaccggccaccaccggggcatccggaggaacgcgcaagttc
aacatgaaaatgatatga
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