Ctenopharyngodon idella (grass carp): 127505357
Help
Entry
127505357 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-2
KO
K06243
laminin, beta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127505357
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127505357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
Zw10_N
HsbA
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
127505357
NCBI-ProteinID:
XP_051736797
LinkDB
All DBs
Position
22:7919274..7963832
Genome browser
AA seq
1839 aa
AA seq
DB search
MKMASYFSVLLLVLPVVAQELPSAPHGCMDGSCYPATGNLLIGRAINLTATSTCGLDGPE
LYCIVSHLQDSDKCFMCNSQEPYDADYRRNSHGVENVIYQRDSRGELTWWQSVNGEENVS
IRLNLEAEFHFTHLIMKFKTFRPAAMMIERSSDFGRTWRPYRYFAHNCTKTFPRVPAHSL
RFIDEVICEERYSDIEPSTEGEVIYKVLDPAIHVKDPYGLDIQDLLRITNLRINFTKLHT
LGDNLLDRRPDVLQKYYYALYELVVRGSCFCYGHASECAPVPGVTTRDSGMIHGRCVCNH
NTVGLNCEHCRDFYHDAPWRPAETDNSHTCRECNCNGHSNQCHFDMAVYLATGNVSGGVC
DNCLHNTMGRNCETCKPFYYQDPSRDIRDPTACVPCDCDPVGSVEGGVCDSHTDLDLRMI
GGQCRCKQNVRGQRCDYCKEGHYGLSLDNPLGCQPCNCDPRGITMLGAPCDQISGDCSCK
RYVTGRYCNQCLPEYWGLSNDLTGCRPCNCDFGGATSSRCMMDNGQCDCRPHLIGRQCSE
VQPAFFCASLDYYKYEAEGAIGHSPDDPALPGNPRPQAETDCVQHLNNQLRRHRRHRRIA
QQQRAALRRIRQLQQTPSVSIVHRERQPGQMVTWTGPGFARVKDGAGLKFTISNIPYAME
YDIIIRYEPESTEDWEAVVSLTSLNLPTXSRCGNMLPTEQMYTVTMTHHRRYIEMPRPFC
FEPNNRYVVSIRFQRHGVSHRHLTAFILIDSLVLIPRYEELPGFQGDDAPDERRRQEMEV
YMCLDSFTTLPMPALAELCTTLICSISAIMHNGALACQCDPQGSLSAECDKVGGQCHCKP
NVIGRQCDQCAPGTYGFGPYGCTECDCHSQGSVGHQCDPVTGQCPCRHGVIGRQCSDCQP
GQWGFPNCRQCQCNGHAESCDPETGACYECRDYTAGQLCDRCVNGFYGNPVLGSGEHCRP
CPCPGNPDSGHSNGASCHADYASNQILCQCGEGYAGPRCDRCAPGYYGDPEQPGGTCRPC
QCNGNVDPQDPESCDPRTGQCLKCLYNTDGHSCSECKLGYYGNALAQDCRRCTCVTAGTL
QGYCNNGVCHCNKQTGDCPCKPNIIGHKCDNCAPNHWNFGSDCGCEPCGCVQPNALSTHC
NMFSGQCHCQPGFGGRQCNECEMFHWGDPRVKCEECNCHPLGSETAQCDRATGACECKEG
ASGRHCDECARGFTGNFPKCVRCHPCFQLWDDAICQVNRDLTHIKDVIAMILEKGEVPGV
SDSRIRELEKKLAQVQDLIKDGDQEGIYNLISQAIDDLRAEIALTDGRLMGVIRELNVTA
DLDNALKQNLTALEKELKDLNNTLHQLRRGLENYLTAGLAEQFENVRKYYQSSLNSEQRC
NASVYGPQSPVEQSQDTRNRTEALLKERKDSFLRTLAANNRSLSELEDKAHEIDRKVHHL
SNKVCGGHGNASANSSCPDXPCGGAGCRDRDGVLKCGGKGCNGTVGASVTALDHADDVHK
SLTAASNELQTMAKKLRDIATLTQTVKKQANNTLNKAQSKKDLFENSNKLLRDFIQKIRD
FLNEEGADPESIEKVAQQVLAISLPVNRTVMVNIVEQIKESITNLTNVEALFNHTSEQLA
KVKDLLKRAQDAKSQAEGVSNNINKTKEAIETSQSAIKKAKEEMTTAQENLKNAQNITNM
VDDKLLILDNNLMDVMMRLANLSHGVDLLKNKTEQNREMAKDAKAQSDNATQEAAGLQEE
LTNAENLYKELKEKVDSVGGEGNVNQRAIEMKKEAEELLNKTITGMNNLRKLEKRLNKNE
KKMQQQRDELADLEKNVTDVREFIRSKVMAYNNCAGQKN
NT seq
5520 nt
NT seq
+upstream
nt +downstream
nt
atgaagatggcaagctatttcagtgttctgcttctggttcttccagttgtggctcaggag
ctcccctcagccccacatggctgcatggacgggagctgttacccagcaacagggaacctt
ctgattggcagagctattaatctgaccgcaacctccacctgtggcctggatgggcctgag
ttgtactgcattgtcagtcatttgcaggattcagataagtgctttatgtgtaactctcag
gagccatacgatgccgattatcgcagaaacagccacggggtggagaacgtcatctaccag
agagacagcagaggagaactcacctggtggcaatctgtaaatggagaggagaatgtcagt
attcgactaaatcttgaggccgagttccactttactcatctcatcatgaagtttaagacg
tttaggcctgctgctatgatgattgagcgttcttctgattttggccgtacatggaggcca
tatcgctacttcgcccacaactgcaccaagactttccccagggttcctgcccactctctg
cggtttattgatgaggtcatctgtgaggagcgatactctgacattgaaccgtccactgag
ggagaggtcatctacaaagtgctggatcctgcgatccatgtcaaagacccatacggtctt
gacattcaggatttgttgcggatcactaacttacggataaacttcactaaactgcacact
ctgggcgataacctgcttgaccgccgtcctgacgtgctgcagaaatattactacgctttg
tatgagctggttgtgcgtgggagctgcttctgctacggtcatgcgtcggagtgcgcacca
gtacctggagtgaccaccagggattcaggcatgattcatggacgctgtgtgtgtaatcac
aacactgtgggattaaactgcgagcactgcagagatttctaccatgatgcaccctggagg
cccgccgagactgataactcacatacctgcagggaatgcaactgtaacggtcactccaat
cagtgtcattttgacatggcggtgtatctggctacggggaacgtcagtggaggcgtgtgt
gacaactgtcttcacaacaccatgggccgcaactgtgagacctgtaaacctttttactat
caggatccatctagagacatcagagacccgactgcatgtgtcccctgtgactgtgacccc
gtgggctctgtagagggaggagtttgtgacagtcatactgatctggatctgcgtatgatt
ggcggtcagtgtcgctgtaagcagaacgtcagaggtcagcgctgcgactactgcaaagag
ggacactatggactcagtcttgacaacccactgggatgccagccatgtaactgtgacccc
cgtggcatcaccatgctgggagccccgtgtgatcagatcagtggggactgctcctgcaaa
agatacgtaactggccgctactgcaaccagtgcctgcctgaatactggggactcagtaat
gatttgactggttgcagaccctgcaactgtgactttggtggagcaaccagcagcagatgc
atgatggacaacggtcagtgtgactgtcggcctcatctgattggtcggcagtgttctgaa
gtgcagcctgcgtttttctgtgcttctctggattattacaaatatgaagcagaaggagct
ataggtcactcccctgatgatcccgctcttcctggcaacccgaggcctcaggctgagacc
gactgtgtgcagcatctcaacaatcagctgagaagacaccgccgtcaccgtcgcatcgcc
cagcagcagagggcagcactgagacgtatccgacagttgcaacaaacgcccagcgtgagc
attgtgcacagagagagacagccgggtcagatggtcacatggaccgggccgggcttcgct
cgggttaaagatggagctggactaaagtttaccattagcaacatcccttatgccatggaa
tatgacatcataatccgatacgagccagagtccacagaggactgggaggctgtagtgagc
ttgacatccctgaatttacccacanagtctcgctgtggaaacatgctgcccacagagcag
atgtacacagtcacaatgacccaccacaggaggtacattgaaatgccgaggcccttctgc
tttgagccaaacaaccggtatgttgtgtccatccgtttccagcgccatggcgtgtctcac
cgacatctcaccgccttcatcctgatagactcactcgtgctgatacccaggtatgaagag
cttcctggtttccagggtgatgacgccccagacgagcgtcgacggcaggagatggaggtg
tacatgtgtttggattccttcacgaccctgccgatgcctgcgctggccgagctgtgcact
acactcatctgcagcatctctgctatcatgcacaatggagccctggcatgtcagtgtgac
cctcagggttcactgagtgcagagtgtgacaaagtcggaggtcaatgtcactgtaaaccc
aatgttattggccgtcagtgtgatcagtgtgcaccggggacgtatggatttgggccttat
ggctgcactgaatgtgactgccactctcagggctctgtagggcatcagtgtgaccctgtg
acgggtcagtgtccgtgccggcatggggtgattggccgtcagtgctcagactgccaacca
ggtcagtggggattccccaactgtaggcagtgccaatgtaatggccatgcagagagctgt
gaccctgaaacaggtgcctgctatgagtgcagagactacacagctggacagctgtgtgac
aggtgtgtaaacgggttctatggtaacccagtgttgggttctggcgagcactgtcgcccc
tgtccgtgtccaggaaaccctgacagcggacattccaacggagcttcctgtcacgcagac
tatgcctctaaccagatcctctgccagtgtggtgaaggatatgcaggtcctcgctgtgat
cgctgcgctcctggttactatggtgatcctgagcagcctggcgggacgtgcaggccgtgc
cagtgcaacgggaacgttgacccccaggacccagagtcatgtgacccacgaaccggccag
tgcctcaagtgcctgtataacactgacggccactcttgctctgagtgtaaattgggttat
tatggaaatgcgctcgcccaggactgtagacgctgtacttgtgtaactgctggcacttta
cagggctactgtaataatggagtatgtcactgtaataagcagactggagattgcccctgc
aaaccaaacatcatcggccacaaatgtgacaattgcgcccccaaccactggaacttcggc
tcggactgtggatgtgaaccctgtggatgcgtccagccaaatgccctcagcacccattgc
aatatgttcagtggccagtgtcattgtcagccaggttttggaggacggcagtgcaatgag
tgtgagatgttccactggggtgatcccagagtaaagtgtgaagagtgtaactgccaccct
ttggggtccgagacggctcagtgtgaccgcgcaacaggcgcatgtgagtgtaaggaggga
gcttcaggccgtcactgcgatgagtgtgcccgtggctttaccggaaacttccccaagtgc
gttcgctgccatccctgcttccagctctgggatgatgccatctgccaagtcaaccgagat
ctgacccacatcaaggatgtcattgccatgattctggagaagggtgaggtgcccggagtc
agtgacagccgcatccgtgaactggagaagaagctggcacaggttcaagacctgatcaaa
gatggagaccaagagggaatctataacttaatcagccaggctattgatgacttgagagca
gagatagctttgactgatgggcgtctgatgggtgtgattcgggagctgaatgtaacggca
gaccttgacaacgctctgaaacaaaacctaactgcactggagaaagaactgaaagacttg
aacaatactcttcaccaattgcgcagagggctggagaactacctcactgctggattggca
gagcaatttgaaaatgtgcgcaagtactaccagagttcactgaattcagagcagcgatgt
aatgcctccgtatacggacctcagagtcccgtggaacagtctcaagacacacgtaaccgt
actgaagccctgctgaaagagagaaaggacagcttcctccgtacacttgccgccaacaat
aggtctttgtctgaactggaggataaagctcacgagatagaccgaaaggtccatcatctc
agcaacaaggtatgtggtggccatggaaatgctagtgcaaatagtagctgtccagatnag
ccttgtggaggagctggttgtcgtgaccgtgacggtgtgctgaagtgtggagggaaagga
tgtaatggaactgttggtgcctcagtgacggctctggatcacgctgatgatgttcataag
agcctgaccgctgccagcaatgagttacaaaccatggctaaaaagcttcgagacattgct
acactcacccagactgtgaaaaaacaagcgaacaacactctcaataaagcccagagcaag
aaagatctctttgagaattccaacaagttactcagagacttcattcagaagattagagat
tttttgaatgaggagggagcagatccagaaagcattgaaaaagtggcccagcaggttttg
gcgatctccttgccagtcaacaggaccgtaatggtcaacatagtcgagcaaatcaaagaa
agcatcaccaaccttaccaacgtggaggcgctgttcaaccacacctcagagcaactggcc
aaggtcaaggatctgcttaaaagagcacaagacgcaaagtcacaagctgaaggagtgagc
aataatatcaataaaactaaagaagcaattgaaacctctcaaagtgctataaagaaagct
aaggaggaaatgaccacagcccaggaaaacctcaagaatgcccagaacatcactaacatg
gttgacgacaaactcttaattttagacaacaacctcatggatgtgatgatgcgattggcc
aatttgtcgcatggagtggatttattgaagaataaaacggagcagaacagggagatggca
aaagatgccaaagcccagtcggacaatgcaactcaagaggctgctggacttcaagaggaa
ctgacaaatgctgagaatctgtacaaggagctgaaagagaaagtagactcagtgggggga
gaaggtaatgttaaccagagagccatagagatgaagaaagaagcagaggaactgctgaac
aagaccatcacaggcatgaacaacctcagaaaattggagaaaaggttaaacaagaacgag
aagaaaatgcagcagcagcgagatgaactggcagatctggagaaaaacgttacagatgtc
agagaatttatccgatcaaaagtcatggcctacaacaactgtgcagggcagaaaaactaa
DBGET
integrated database retrieval system
