Ctenopharyngodon idella (grass carp): 127505390 Help Entry 127505390         CDS       T08802                                  Name (RefSeq) collagen alpha-3(IX) chain   KO K08131   collagen type IX alpha Organism cide  Ctenopharyngodon idella (grass carp) Pathway cide04510   Focal adhesion cide04512   ECM-receptor interaction cide04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:cide00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127505390  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127505390   09142 Cell motility    04820 Cytoskeleton in muscle cells     127505390  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00535 Proteoglycans [BR:cide00535]     127505390 Proteoglycans [BR:cide00535]  Extracellular matrix (ECM) proteoglycans   Others    127505390 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  127505390 NCBI-ProteinID:  XP_051736839 LinkDB All DBs Position 22:complement(23107657..23129816) Genome browser AA seq 679 aa AA seqDB search MAVFSALHLLFLFQLLTSSLAQERPGTRGAPGAPGPPGPPGKDGIDGKPGPAGLPGKPGP KGKAGAPGAAGSPGLPGLPGVDGLTGPDGPAGKDGPPGAAGDPGPSGPDGPPGRGRPGAP GLAGENGLPGGAGPQGPPGLEGLPGLPGLPGLDGPPGLPGTLPEGNGDLLCPAICPPGPP GPPGMPGFKGHTGHKGSKGELGKDGEKGDQGPPGPPGIPGTVGLQGSRGLRGLQGPVGAV GDRGLPGFRGIPGIAGIIGKTGDVGEKGPQGFRGPKGEIGKIGPKGVPGGAGPKGEPGIP GRDGKDGTQGLDGEKGDAGRPGVPGEKGPNGLPGLPGKAGAKGAKGGVGSPGKMGEAGPS GEPGIPGEIGIPGERGEAGPRGVAGGIGLPGNTGPQGVKGFQGVKGALGDPGLPGPTGIR GGFGERGPVGAGGPKGDMGVAGSDGLPGENGEPGPYGPVGQKGEAGKRGELGAKGVVGPQ GEIGGRGPPGKPGPMGFQGEQGFPGVAGKTGVPGKLASEQHIRELCGSMIDDQMAQLAAN LRRPLAPGPVGRPGPAGPPGKQGEVGSIGHPGALGPPGYRGLPGDLGDPGPRGDVGEPGD KGPIGKAIEGPIGDQGDQGLPGVNGIVKDGRDGAPGDPGEPGEAGRAGRPGHQGSPGICD TSACQGPVVHGKSSNPKNH NT seq 2040 nt NT seq  +upstreamnt  +downstreamnt atggccgtgttctcagcgcttcatttactttttctgttccagctgttaacatcgtcactc gcccaggagaggccgggtactcgtggcgcacctggagcgccagggccacccggaccccca gggaaagatggcatcgatggtaaacctggccctgctggacttcctggaaagcctgggccg aaaggaaaagcgggtgcccctggcgcagcagggagcccgggactgcctggcctccctggt gttgatggtttgaccggtccggatggtccagctggcaaagatggacccccaggagcagca ggagacccaggaccttccggaccagatggaccccctggcagaggcagaccaggagctccg ggtcttgctggagagaatgggcttccaggtggagcaggacctcaggggccgccggggctt gagggtcttccaggacttcctggtcttccaggcttagatggacctcctggacttccagga actcttcctgaaggcaatggagatctgctgtgtccggccatctgtcctccgggtcctcct ggaccgcctggaatgcctggattcaagggtcatacaggtcataaaggaagcaagggagag ttggggaaagatggtgagaagggtgatcagggcccgcctggtcctccgggaatcccaggg accgtgggtttacagggctctcgagggctgagggggctgcagggtccagtaggagcagta ggagacagaggattgcctggtttcaggggaatacctggaattgctggcatcattggaaaa accggtgatgttggtgaaaaaggacctcaaggtttcagagggcccaaaggagagatagga aaaataggccccaagggagtacctggaggtgcaggacctaaaggcgaacctggcatccct ggcagggatgggaaggatgggactcaaggactagatggtgaaaagggggatgctggtaga cctggagtacctggtgagaaaggacctaatggtctgcctggtttgccaggaaaagctggt gcaaaaggtgccaaaggaggagtgggcagtccaggaaagatgggagaagcaggaccatct ggagagccaggtatacctggtgagattggcatccctggagagagaggagaggctggaccc agaggagtggctggtggcattggactacctggaaacactggaccccaaggtgttaaagga ttccagggtgttaaaggagctctaggtgatccaggtctgcctggtccaacaggaatcaga ggcgggtttggtgagaggggtccagttggagctggagggcctaaaggagatatgggagtt gctggaagtgatggtttaccaggggagaacggagagcccggtccatatggtcccgtcggc cagaaaggggaggctggtaagcgtggtgaactgggagccaaaggagtcgtcggaccacag ggagagattggaggcagagggccacctggaaaaccaggaccaatgggattccagggagaa caaggttttccaggggtcgctggaaagactggtgtccctggtaaactggctagtgagcag cacatcagggaactgtgtggctcaatgattgatgatcagatggctcagctagctgctaac ctgagaagacccctggctcctggtcccgtgggacgtccaggaccagctggacctccagga aagcaaggagaagttggatccattggtcaccctggagcccttggcccgccaggctataga ggactgccaggagatctgggtgatcctggtcctcgaggggatgtcggtgagccaggtgat aagggccccataggtaaagcaatcgaagggcccattggagaccagggtgaccagggtctg ccaggcgtgaatggcatcgtcaaagatggccgtgatggagcacctggagatccaggagag ccaggagaagccggaagagccggcagaccaggacaccagggatcacctggaatctgtgac acttcagcttgccaaggacctgtggttcacgggaagtcctccaaccccaagaaccattaa

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