Ctenopharyngodon idella (grass carp): 127505396
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Entry
127505396 CDS
T08802
Symbol
si:ch211-197l9.2
Name
(RefSeq) LOW QUALITY PROTEIN: protein SOGA1
KO
K27704
microtubule cross-linking factor
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127505396 (si:ch211-197l9.2)
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
127505396 (si:ch211-197l9.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
SOGA1-2-like_CC
YabA
Motif
Other DBs
NCBI-GeneID:
127505396
NCBI-ProteinID:
XP_051736852
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All DBs
Position
22:20748416..20767374
Genome browser
AA seq
1374 aa
AA seq
DB search
MKPESRKRSESNRSKSSGRRKLSDGSITSDDLSKDSGCATGKLSSTDSSSEISDASEEQK
QSTDAQCGEVCHGGTDEEMMDDLAEQISEHREDDDLISATLSPGFGFGEGSISPGDQRSY
VSLDSRLNLSASVAFSDLTGDFTDGVHEDLLREIDDLRSENEYLKDEMEELRSEMLEMRD
MYMEEDVYQLQELRQQLEQANKACRILQYRLRKAERRSLRVAQTGQVDGELIRTLEHDIR
VAKSVSLRLHSELEVIQKKNSRLEWENEELRERLQDLEVAKQVLQAEMDKSQNSLKRRSL
RSTSGKSEKKLSPQDDSADLKCQLHFAKEESALMCKKLTKMALESEAMREELAKYRLLYG
EVDENQAAAGTTNSAHTREAEVKVHLRLVEEEATLLSRRIVELEVENRGLRAEMSELRER
GGGSLEEEEMVKGAGEGLAMTLRTGEQEEVLGGGCLDGKEKADALTIHNSMQENQMHAEE
EHMENSSIHMHREGPIGGEQELFAETKEEDGQAQCKSDCTFGVKDLEGLLAIHDQALLVR
STIQLLTAPAKNGLSPTCTHKTTPGGPYLSKTTVDPQCKTHQWLLDPMLSPLTNGLEVLQ
AQLRALVEKLEVLSSSTSEHTGPVTEKNILHFGEDLSIMKEDATNQERQCEGSNQDSLVL
LTLQLRWFIQQWRQGERPNGDGKNLFEIYCQNEIHLLKDIESRACKNNLQEKCDTQVSNA
LLTDLRTALQDLFSELWEQYRAAQFVVRQFANAKAAWAVECTELKSLISRLEDPAGKAGI
KGPSDLNAALQKDHVEKLQHLLAESYTAVMDLTRQLKVRESNWSSERQELLEHLNHVRLE
CERSKTAKQNRKMQSPRNKIMTKDGKMERMTLKTGIAKPNKNWKYLSHEAALLDREDACK
TWDCPIMPSSFPGLNLNQELTQRSHTAPERTSIRIYFSPPSAKRIQMSSLVAGEEEECEE
SQEPHFSAISCGLVNQDWVSAYENWLGSMPIDHQNLTERNSIAVISSTSCSGLQTSSIAS
PSRLAFNSLDVSANLSDDMKEITASVLQTSQSSPLERKRGKEFGSNVVSVVSTGTQTQSQ
PQVTTIGLQTDGPRCLYAAKHWSPRVTSFVSARTQQTSASLERVPGPTERFQPHSTSPKI
QRRHSTSSPFSSKSSSSTSPSSSSSFTTSSLSSSSSLSASSRLDYGAKERGLWALSQRAS
TSSRPSSVSTQVSDKPGGRKTVGVHKYGLVQEFLRNVCGRGEKTNPEVEKAPVARRDHIG
LVGSKKSEHPPSRIPAVPLVRNDSITKIVNRRFMKQSQKDEGVCQSQTQTQRQIDRGSIS
RNKGLEDGACDCSSRSLTSCFARPSQKNLRNAHSQNKPRQHENPSSRGKGDPLS
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagagtcgagaaaacgctccgaaagcaatcgcagtaaatcatccgggagaaga
aagctatcggatggaagcatcacgtctgatgacctgagtaaggactctggctgtgctacg
gggaaactgtcttccacggacagcagctctgagatctcggacgcatctgaggagcagaag
cagtccactgatgcccagtgtggtgaggtctgtcacggaggaaccgacgaagagatgatg
gacgatttagctgagcaaatatcagaacatagagaagatgatgacctgatcagtgccacc
ctgtctccggggtttggcttcggcgagggaagcatctctcctggagaccagaggtcctac
gtttccctggatagtcgcttgaacttgagcgcatctgtggcattttcggatctgactgga
gactttactgatggggtgcatgaggatctgctgagagagattgacgacctgagatcggaa
aatgaatatttaaaggacgaaatggaggagctgcgctcagagatgctggagatgagagac
atgtacatggaggaggatgtataccagctgcaggaactccgacagcagctggaacaggcc
aataaggcctgtcgcatcttacagtaccgactcaggaaagcggagagacggagcctgcgc
gtagcccagacgggacaggtcgacggggagcttatcagaacgcttgagcatgatattagg
gtggcaaaaagcgtctcccttcgcctgcacagcgaacttgaggtcattcaaaagaaaaat
tcaaggctagaatgggaaaatgaggagctgcgtgaacggctgcaggatctggaggtggcg
aagcaagtcctgcaggctgagatggacaaatcacagaattctctgaagagaagaagtttg
agatcaacatcaggcaagagtgaaaagaaactctctccacaggatgacagtgctgatttg
aaatgccagctccactttgccaaagaggaatctgcactcatgtgcaagaagctaacaaag
atggccctggaaagtgaggcgatgcgggaagagcttgccaaataccgtctgctttacggt
gaggtggatgaaaaccaggctgcagcaggcacgactaattccgcccatacccgagaagca
gaggtcaaagttcacttgcggctggtggaagaggaagctacgctgctgagtcgtcgaata
gtggagctagaggtggagaaccgtggcttgcgggcagagatgagtgaactgcgtgaacga
ggaggaggaagcctggaagaagaggagatggtgaagggggccggtgaagggttagcaatg
actcttcgcactggggagcaggaggaggttcttggaggtggatgtctggatggtaaagag
aaagcagatgcattgactatccacaatagtatgcaggagaaccagatgcatgcagaggaa
gaacatatggagaactcttctatccacatgcacagagaagggccgatcggtggggaacag
gagctttttgcagagactaaagaggaagatggacaagctcaatgcaagtctgactgcaca
tttggtgtgaaggatctagaaggtcttcttgccatccatgaccaggcgttgcttgtcaga
tcaactatccagctcctgacagccccagctaaaaatggcctatcacctacatgtacccat
aagaccactcctggtggcccttacctaagcaaaacgacagtagatcctcagtgcaagaca
catcaatggcttctggaccccatgttgagtcccttgaccaatggactagaagtgttacaa
gcccagctgcgtgctcttgtggaaaagttggaggtgctgtcaagctccacttcagagcac
actgggcccgttacagaaaagaatatattacattttggtgaagatttaagtataatgaaa
gaggatgcaacaaatcaagaacgtcaatgtgaaggaagtaaccaggacagcttagtgctg
ctcactctgcagctccgatggttcatccagcagtggcggcagggagagagacccaacgga
gacggaaagaacctgtttgagatttattgtcagaatgaaattcatctcctaaaggatata
gagtcaagagcatgcaagaacaatcttcaagagaaatgcgacactcaggtgagcaatgcc
ctgctgacagacctgaggacagcactgcaggatctgttctctgaactttgggagcagtac
agggcagcccagtttgtcgtccggcagtttgcaaacgccaaagcagcgtgggccgtggag
tgtacagagctcaagagcctcataagcaggctggaggatccagctgggaaggcaggaata
aagggtccatcagacctgaatgcggctttgcagaaggaccacgttgagaagcttcagcac
ctgttagccgagtcctacactgcagtcatggacctgacaagacagctgaaggtccgtgag
agcaactggagctctgagcggcaggaactgctagaacacctgaaccatgtgcgtctagag
tgtgaaaggtcgaagacagcaaagcaaaatagaaaaatgcagtcccccaggaataagatc
atgaccaaagatggaaaaatggaaaggatgactctcaaaactggcatagcaaaacccaac
aagaactggaagtacctcagtcatgaagctgcccttctggacagagaagatgcctgtaag
acttgggactgccctatcatgccttccagtttccctggtttgaacctaaaccaggagctg
acccagagaagccacactgctccagagaggaccagcattcgtatatatttcagcccacca
tcagcaaaaaggatccagatgagctctctggtagcaggagaggaggaagagtgtgaggag
agccaggaaccacatttcagtgccatttcctgtggccttgtaaaccaagactgggtctct
gcatatgaaaactggctaggtagcatgccgattgaccaccaaaatttgacagagagaaat
tcaatagctgtcatcagttctacatcctgttcaggtcttcagacctccagtattgcgtcc
ccttcacgcttggctttcaatagcttggacgtctcagccaacttgagtgatgacatgaag
gaaattacagcaagtgtgcttcaaacctcgcagtccagccctctagagaggaaaagagga
aaggagtttgggagcaatgtggtgagtgttgtgagtacaggaactcaaactcaatcccaa
ccacaggtgaccacaatcgggctacagaccgatggccctcgatgtctttatgctgcaaag
cactggtcaccccgggtgacttcatttgtctccgcaagaacccagcaaacgtcagcgtca
ttggaaagggtacctggtccaacagaacggtttcagccacattccacctcgccgaaaata
cagcgcagacactccacatcctctccgttttcctctaagtcttcctcttccacttcaccc
tcatcctcttcctccttcactacatcctctttgtcctcttcctcatctctgagcgcctcc
tccaggctggattatggagctaaggaacgtggtttgtgggctctgtctcaacgtgcttcg
acatctagcaggccgagctcagtatcaacgcaggtcagcgataaacctggcggtcgtaaa
actgtaggagtccacaagtacggtctggtccaggagtttctgcgtaacgtgtgtggtcga
ggagagaaaaccaacccggaggtggagaaagcgccagtggctcgtagggatcacatcggt
ctggtgggttcaaagaaatctgagcaccccccgtctcgtataccagcggtgccactggtc
agaaatgacagcatcaccaaaatcgtgaaccgcagatttatgaaacaaagccaaaaagat
gaaggagtgtgtcagagccagacccaaacccagcgccaaatcgacaggggttcaatcagc
aggaacaaaggcttggaggatggagcctgtgactgcagctcacgctctttgacatcctgc
tttgctcgaccctcacaaaaaaacctccggaacgcacacagtcagaacaagccccgccaa
cacgaaaacccctcatctcgtggtaaaggtgatcctctatcctaa
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