Ctenopharyngodon idella (grass carp): 127505559
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Entry
127505559 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: F-box/LRR-repeat protein 5
KO
K10271
F-box and leucine-rich repeat protein 5
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127505559
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127505559
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
LRR_6
LRR_4
Hemerythrin
F-box
DUF7885
LRR_At5g56370
LRR_At1g61320_AtMIF1
F-box_4
LYRM_2
Motif
Other DBs
NCBI-GeneID:
127505559
NCBI-ProteinID:
XP_051737149
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All DBs
Position
22:16384534..16400081
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AA seq
688 aa
AA seq
DB search
MAPFPDEVDVFTGPHWRMKQLVGLYSEKLSNTNFSNNRDFRSFLQSLLATFKEFKMHEQI
ENECIIELLQERSHMVYHVHADNKLSEMLSLFEKGLRSVKSEYEQLNYARQLKERLEAFT
QDFLPHMKEEEEVYQPMLMEYFTYEELKAIKRQVMQQHCSNPSWSSAADVLKGLNLWSHA
EELHKAFKYSDHEKTGDERGSERVSISALPQEVLLRVFRFLGPEDLCRCGQVCSVWSQVT
RTGSLWRHLYPVRWARGDYYCGPPGESDQEPDEEWVKSLQDEGRAYQERDEDADVDESEE
ASDGSPAISAVQREKTLLNGMIQKLLPSVGPSVRSLSLAYSAAVSSKMVRQILSLCPNLT
HLDLTQTDVSDSAFDSWAEFGVCRTLEHLDLSGCDKITDRTLKILSLGLGDLTSSSPDRK
AKLLKAPPSPIKLQDEHSLLPIGRSCQDLIFKRRPGGRGSGCGPAHVWVLDQAKLADIED
AADWSRRGGVSAQESGRGSIFEPPGGGGSCCCRRSRRRSFRTGISSSHWQYSSMGDALCG
HSTCCTSDVSLWTVREAHCDLQATGGSVDFRTKCSFEGESCPEHHNRTDQSGACRTLRFL
SLSGCYQITDLGLRCLSQRGGLPLLEHLNLSGCLLITGAGLQELVSACPALNIEHFYYCD
NINGPHADTASGCQNLQCGFRACCRSGE
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggctccgtttcccgacgaggtggatgtttttaccgggccgcactggcgcatgaagcag
ctggtggggctctatagcgagaagctgtccaataccaacttctccaacaacagggacttc
cgctcgtttctgcagtcgctcctcgccacctttaaggagttcaagatgcacgagcagatc
gagaacgagtgcatcatcgagctgctgcaggagcgcagtcacatggtctaccacgtgcac
gccgacaacaagctgtccgagatgctgtcgctgtttgagaaggggctgcgcagcgtgaag
agcgagtacgagcagctgaattacgcgcggcagctgaaggagaggttggaggcgttcact
caggacttccttcctcatatgaaggaggaagaggaggtgtatcagcccatgctgatggag
tacttcacgtacgaggagctgaaggccatcaagcgtcaggtgatgcagcagcactgcagt
aacccgtcctggagctccgccgcagacgtgctgaagggcctgaacctctggagtcacgcc
gaggagctgcacaaggccttcaaatactccgaccacgagaagaccggagacgagcggggc
agcgagcgcgtgtccatctcggcgctgccgcaggaggtgctgctccgggtgttccgcttc
ctgggtccggaggatctgtgccgctgcgggcaggtgtgcagcgtctggagtcaggtgacc
aggaccggctcgctgtggagacacctgtaccccgtccgctgggctcgaggtgattattac
tgcggtcctccgggagagtcggaccaagagccggacgaggaatgggtcaagagtctgcag
gacgagggacgagcctatcaggagagggacgaggatgcagacgtggacgaatcagaggag
gcgtctgacggatctccggccatcagtgcggttcagagggagaagacgctgctcaacggg
atgatccagaagctcctgccctccgtcggcccgtccgtgcgctcgctcagcttggcctac
agcgccgccgtctccagcaagatggtgcgacagatcctcagtttgtgcccgaacctgact
cacctggacctcacgcagactgacgtctccgactctgcctttgacagctgggcggagttc
ggggtgtgtcgtactctggagcacctggatctgtcgggttgcgacaaaatcaccgaccgc
acgctgaagatcctgtcgctaggattaggggacttaacctcgtccagtccggatcgcaaa
gccaagctgctgaaagccccgccctctcccattaaactacaggacgagcactcccttcta
ccaataggacgcagctgccaggatctcatattcaagcggagacctggtgggcgtggctca
ggttgtggccccgcccatgtgtgggttcttgatcaggcgaaactagccgacatcgaggac
gcggccgactggagcagacgagggggcgtgtctgcacaggaaagtgggcgtggcagcatc
ttcgagccgccgggaggtggcggctcgtgctgctgtaggaggagccggaggcggagcttc
aggactggtattagctcctcccactggcagtacagctctatgggtgacgctctctgcggt
cactccacctgctgcacctccgatgtgtcgctctggactgtgagagaagcgcactgtgac
ctccaggccacagggggcagtgttgattttcggactaaatgctcatttgagggtgaatct
tgccccgagcatcacaacaggactgaccaatcaggagcctgtcgcacacttaggttcctc
agcctgtccggatgctatcagatcacggatctcggcctgaggtgtctgtctcagcgtgga
ggactccctctactggagcatctcaatctctccggctgtctgctcatcacaggggcgggg
cttcaggagctggtgtctgcttgccccgccctcaacatcgagcacttttactactgcgat
aacattaacggtcctcatgctgacacggccagtggatgtcagaatctgcagtgcggcttc
agggcttgctgtcgatctggagagtga
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