Ctenopharyngodon idella (grass carp): 127505579
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Entry
127505579 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: dynein axonemal intermediate chain 3
KO
K24722
dynein axonemal intermediate chain 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
127505579
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127505579
04812 Cytoskeleton proteins [BR:
cide04812
]
127505579
Cilium and associated proteins [BR:
cide03037
]
Motile cilia and associated proteins
Dynein arm
127505579
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
127505579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_RFWD3
WD40
DNAPKcs_CC5
Beta-prop_BBS7
CCDC-167
Motif
Other DBs
NCBI-GeneID:
127505579
NCBI-ProteinID:
XP_051737184
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All DBs
Position
22:16435991..16456993
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AA seq
889 aa
AA seq
DB search
MRDMSSKRPKSRVSSGTSKVKGKDKKNEKNFPTPDEGAPESGHPEYIFPLVLTSATQELF
GCRADEDVTGENPYKLLKKEDIIQDLKTRAAVSDFSPIKQLVLEYPEDELLLVFDRDFTY
GQSFYLVLTEEAKENMLKSPVQGDDEELVEDEEEEDMIVPKTPESHPWISLGSEQEIEEE
SVTESRPRLRYKISPLMRHCGAPVCFSDRNTLDGKDGYVECPSYEDKSFSIRQMERHTAI
QASSDTKHSSTQTMWKYPKNMCTQYEPREFSPEEKEHHLRSENMKNFIISVAIRFEISLQ
QNHIADVFCDDWTALCEDDGMPTGKTETQLKEYQSFMDLHFSKEKSISHVHWHPTISGVI
AVAMTERLSLEERIDNSTKLLLNPSYILFWSFTDPINPQLQLECPDDVLSFQFCPSDPNI
IAGGCMNGQVVLWDISAHVERLHDTRSVGKNISNKLDKNNAIPVVRYCAVSGIENGHKAP
ITDIQWLPETFEVSRLGIPVENTSRISVQMVTCAPDCCVLFWDLRPPRAVSQSLTDVKQK
SEDKPLENPQGVPNTFKHLNLTWKPLIRVSLPKIGSSGEYSPLKFSLRDNTVDYITGDKP
TQITELEEGCGFAQLRVPSAKQQKPLENISTKLYVGTEDGELIYTDWKMEKDNDSGRLFS
AKPSHRFLSHHTMINTVSRSPFFKDIILTVGSFSFAIWKEGVTSGPILLSACSKMMCMVG
HWSLSRPAVFFIGKEDGNIEVWDLLQNTHEPSQTQNISTASITCIKTSSTSAKHHLLAVS
DRIGTLHILQIPWTLRKSSNNEIQNVRKYFEKEEERLEYFEKRQIKHEKQKKEMEAEQLK
KKTEPVMPLKQEEELEAEALKEYEQFLALGKDILKNMGLLTETEDESDL
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atgagagacatgagttcaaagagacccaagagcagagtgagcagtgggaccagtaaagtc
aaggggaaagataaaaaaaatgagaagaatttccccaccccggatgaaggtgcaccagaa
tctggtcatcctgaatacatcttcccgctggtcctgacctccgccacacaggagctgttt
ggttgccgggcagatgaggatgtaaccggagaaaatccttacaagctgctgaaaaaggaa
gacatcattcaggacctgaaaaccagagcggccgtgtctgacttcagccccatcaaacaa
ttagtgctggagtaccctgaagatgaacttctgctggtgtttgacagagacttcacatac
ggacagagcttctatctggtgctcacagaagaggccaaagagaacatgttaaagtctcca
gtacagggtgatgatgaggagctggtggaggatgaagaggaggaggacatgatcgtgcca
aaaactccagagtctcatccgtggatctctctgggaagtgagcaggagatcgaggaagag
tcggtcacagagtccagacccagactcaggtataagatctctcctctgatgcggcactgc
ggcgctccggtgtgtttctctgaccgcaacactctggacgggaaggatggatacgtggag
tgcccatcatatgaggacaagagcttcagcatcagacagatggagagacacacagccatt
caggcctccagcgacaccaaacactcgtccactcagacaatgtggaagtacccaaagaac
atgtgcacccagtacgaaccccgagagttcagtcctgaggagaaagaacatcacctgcga
tcagaaaacatgaagaacttcatcatatctgtagcaataaggtttgaaatctccctgcag
cagaatcacatcgcagacgtgttctgtgacgactggacggccctgtgtgaggacgacggc
atgccgacggggaaaacagagacacagctgaaggaatatcagtctttcatggaccttcac
ttcagcaaagagaaaagcatcagccacgtccactggcatcccaccatcagcggtgtgatc
gctgtggccatgacagagagactgtctcttgaggagcggatcgataactccactaaactc
ctgttaaacccgtcctacattctcttctggagcttcactgaccccataaatccacaattg
cagctggaatgtcctgacgatgttcttagtttccagttctgtccatccgacccgaatatc
atcgctggcggctgcatgaacggccaggtagtattatgggatatttcagcacatgtggaa
agactgcatgacacccggagcgtcggcaaaaacatctcaaataaactagacaaaaacaat
gcaattccagtggttcggtactgcgctgtgtctgggatagagaacggacacaaagctccg
atcacagatatccagtggcttccagaaacctttgaggtatccagattagggattcctgtg
gaaaatacgagtcgtatctctgtccagatggtcacgtgtgctcctgactgctgtgtgtta
ttctgggatcttcgacctcctcgtgccgtgtctcaatccctcacggacgtgaaacagaaa
tcagaggacaagcctctggaaaaccctcaaggtgttccaaatacattcaaacacctcaac
ctgacctggaaacccttgatccgagtctccttaccaaagatcggctccagtggtgaatac
agtcctctgaagttcagcttgagggacaatacagtggactacattacaggtgataaaccc
acacagatcacggagcttgaagaaggctgtggattcgctcagctccgggtgccgtcggcc
aaacagcagaaacctctagagaacatcagcaccaaactgtatgtggggacggaggatgga
gaactcatttacaccgactggaaaatggagaaggacaacgactcaggacgactcttcagt
gccaaacctagccatcggttcctctcacaccacactatgatcaacaccgtgagccgctct
ccgtttttcaaggacatcatcctgacggtgggcagcttcagtttcgccatctggaaagaa
ggggtcacgagtggcccgatcctcttgtcggcctgctccaagatgatgtgtatggtcggt
cactggtccctgtcccgaccggcggtcttcttcattgggaaggaggatggaaacattgag
gtttgggacctgctgcaaaacacccatgagccctcgcaaacccagaacatcagcaccgcc
tccattacctgcatcaaaaccagcagcacctccgcgaagcatcatcttctggcggtttca
gaccgtatcggcaccctacacatcctacagatcccatggaccctgcgcaaatcctccaac
aacgagatacagaatgtgaggaagtactttgaaaaggaagaggaacggctagagtacttt
gagaaacggcagatcaaacatgagaagcagaagaaagagatggaagctgaacagctgaag
aagaagacggagccagtgatgccactgaaacaggaagaggagctggaggcggaagcactg
aaggaatatgaacagtttctggctctggggaaggacattttgaagaacatgggcctcctg
accgaaacagaggacgaatcagacctgtaa
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