Ctenopharyngodon idella (grass carp): 127505770
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Entry
127505770 CDS
T08802
Name
(RefSeq) polypyrimidine tract-binding protein 2 isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127505770
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127505770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_10
RRM_PARP14_3
RRM_ACIN1
GlcNAc-1_reg
Motif
Other DBs
NCBI-GeneID:
127505770
NCBI-ProteinID:
XP_051737537
LinkDB
All DBs
Position
23
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AA seq
514 aa
AA seq
DB search
MDGIGDVAVGVKRGSDELLSGGMYNSPSSGLSSISDTTSNGSDSKKLRVEDRVGDAPPSR
VLHIRKLPNDVSETEIIALGLPFGKVTNILTLKGKNQAFLELSTEEAAMTMVNYYSAVTP
HVRSMPVYIQYSNHKELKTDNSNQSGGTPTSGSNSSVGGGAPSSPVLRIIIDNMFYPVTL
DVLQQIFSKFGTVMKIITFTKNNQFQALLQFNDPTNAQQAKGALDGQNIYNSCCTLRIDY
SKLVNLNVKYNNDKSRDYTRPELPAGDGQPSLDTSMVSALSKDSSSLLGKIPGALSPLSA
AAAAAAAAGRVALSGHTGASGVLLVSNLNEEMVTPHSLFTLFGVYGDVQRVKILFNKKDS
ALIQMADMNQAQLAMSHLNGQKMYSKIIRVTMSKHQTVQLPRDGLDDQGLTKDFTNSPLH
RFKKPGSKNFQNIFPPSATLHLSNIPQDITEEDLRVLFSNSGGTVKAFKFFQDHKMALIQ
MTTIEEAIQCLIDLHNYNMGNNHHLKVSFSKSTI
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggacggcattggtgatgtcgcagttggtgtaaagagaggatcagatgagctgctgtcc
ggcggcatgtataacagccccagttctgggctgagtagtatcagtgatacgacatccaac
ggcagtgacagcaaaaaacttcgagttgaagacagagtcggcgatgccccaccatcccgt
gttctccacatcagaaagttacccaacgatgtctcggaaacagagattattgccctgggg
cttcctttcggaaaggtcaccaatatcctcacgctgaaaggcaaaaaccaggcatttctg
gagctcagcacagaggaagctgccatgacaatggtcaattattactcagctgtgacgcct
cacgtccgtagcatgcctgtctacatacagtattctaatcacaaagaactcaaaactgac
aattcaaaccagtcaggtggtactcccacatcagggtccaactctagcgtcggtggcggt
gcgccctccagtccagtactgagaataatcattgataacatgttttaccccgtcaccctg
gatgtgctgcagcagatcttctcaaagtttggcaccgtcatgaaaatcatcacattcacc
aagaacaatcagtttcaggccctgttgcagttcaacgatccaaccaatgcgcagcaagct
aaaggggctctagatggtcagaacatatacaattcctgctgtacccttcggatagactac
tcaaaactcgtcaacctgaatgtgaaatacaataacgataagagcagggactacaccaga
ccggagcttcctgctggagatgggcagccttctctggatacctctatggtctctgccctg
agtaaagactccagttccctgctcggtaagatcccaggtgctctgagcccgttgagtgcg
gccgctgctgctgcggctgcagctggaagagtcgctctgtctgggcacacgggggccagc
ggagtgctgctcgttagcaatctaaacgaagagatggttacgccccacagtctgtttacc
ctcttcggagtttatggggacgtgcagcgtgtgaagattctttttaataagaaagacagc
gcactgatacagatggctgatatgaaccaggctcagcttgctatgagccatctaaacggt
cagaagatgtattcaaagatcattcgcgttacgatgtcgaaacatcagaccgttcagtta
ccgagagatggtttagatgaccagggtctcaccaaagacttcacaaactcaccactgcat
cgtttcaaaaagcctggctccaagaacttccagaacatcttccctccttctgccacgctg
catctgtcaaatatcccgcaagacataactgaagaagacctccgagtcctgttctccaat
tccggtggtactgtgaaagctttcaagtttttccaagatcataaaatggccctaattcag
atgacaaccattgaagaagctattcaatgcctgatcgacctccacaattacaacatgggt
aataatcaccacctgaaggtctccttctccaaatcaaccatctaa
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