KEGG   Ctenopharyngodon idella (grass carp): 127505891
Entry
127505891         CDS       T08802                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03030  DNA replication
cide03410  Base excision repair
cide03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127505891
   03410 Base excision repair
    127505891
   03450 Non-homologous end-joining
    127505891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cide03032]
    127505891
   03400 DNA repair and recombination proteins [BR:cide03400]
    127505891
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:cide04147]
    127505891
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    127505891
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     127505891
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     127505891
Exosome [BR:cide04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127505891
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc HHH_5
Other DBs
NCBI-GeneID: 127505891
NCBI-ProteinID: XP_051737781
LinkDB
Position
23:complement(20906290..20916539)
AA seq 380 aa
MGIHGLAKLIADHAPSAIKEQDIKNYFGRKIAIDASMCIYQFLIAVRQDGNVLQNEDGET
TSHLMGMFYRTIRMLESGIKPVYVFDGKPPQLKSGELEKRGERRAEAEKLLAQAQEAGEQ
ENIDKFSKRLVKVTKQHNEECKKLLTLMGVPYIEAPCEAEASCAALVKSGKVYATATEDM
DGLTFGTTVLLRHLTASEAKKLPIQEFHFSRILQDMGLTHQQFIDLCILLGCDYCGTIKG
IGPKRAIDLIKQHGSIEEILENIDPNKHPAPEDWLYKEARGLFLEPEVVDGPSVDLKWNE
PDEEGLIQFMCAEKQFSEDRIRNGCKKIMKSRQVSTQGRLDTFFTVTGSISSKRKEPEIK
GSAKKKQKTSATPGKFKKGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcacggtcttgcaaagctcattgcagatcacgcgccttcagccatcaaggag
caggacatcaaaaactactttggaaggaagattgctattgatgcgtccatgtgcatctac
cagtttttgatcgctgtgagacaggacggtaatgttttgcaaaatgaggatggagaaacg
acaagccacctcatgggcatgttctacaggaccatccgaatgctggagagtggcatcaag
ccggtttatgtgtttgatgggaagccccctcagctgaaatcaggagagctggagaagaga
ggcgagagacgagcagaggctgagaagcttctagctcaggcacaggaagcaggtgaacag
gagaacattgacaagttcagtaagcgactagtgaaggtcaccaaacaacacaacgaggaa
tgcaagaagttacttactctaatgggagtcccatacattgaggctccatgtgaggctgag
gcaagctgtgctgctctggtgaaatcagggaaggtttatgccacagcaaccgaagatatg
gacggtttgacatttggaacgacagtcctgttgaggcatctaacagccagtgaagcaaaa
aagctccctatccaagagtttcatttcagtcgtattctacaggatatgggtctgacacat
caacagttcattgacctgtgtatcctgctgggctgtgactactgtggcactataaaagga
atcggacccaagagggccatcgacctcattaaacagcatggctctattgaagagattctt
gagaatattgacccaaataagcacccagctccagaggactggctgtataaagaggctcgg
ggtctgttcttggagcctgaggttgtggacggcccatctgtcgatctgaagtggaatgaa
cctgacgaggaaggactaattcagttcatgtgtgctgagaaacaattcagtgaggatcgt
atccgcaacggctgtaagaagatcatgaagagtagacaagtgagcacccagggcaggctg
gacacgttctttactgtaactggatcgatctcttctaagcgcaaggagcctgaaataaaa
ggatctgccaagaagaaacagaaaacaagtgctacaccaggcaaatttaagaagggcaaa
tga

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