Ctenopharyngodon idella (grass carp): 127505898
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Entry
127505898 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
KO
K22753
E3 ubiquitin-protein ligase RNF6 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127505898
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127505898
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127505898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNF6_N
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_5
zf-RING_UBOX
zf-RING_4
zf-RING-like
zf-P11
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
127505898
NCBI-ProteinID:
XP_051737796
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All DBs
Position
23:16138184..16146159
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AA seq
695 aa
AA seq
DB search
MDPPGGRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPEPRPQSSEAEGSSGAVETGAETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPTELPMPPPPPPPPPPPPPP
VSSASAPTTPYNPSRSAPYSLQHPTPYSTARPTLGRRAAVRRTRSSTAPPVTPPLTSQAP
PTPLRRNLPSVPSSPPPQAPLAFQSQEQDGGAVRGQIQVTTSSVNAGEGQNGNEGPDCPT
ALPQSGPQVAPVAREPRNSRTRSRGRMRRAAGAGGALSRSSRRSRSPLDRNPASSVSPTH
SSSAAPVESTGSTAVAMEMGEATVEPAATTDPPEAGEEEGETPASGAGGVRRHPTIMLDL
QVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIR
IPLRRISETGLGEPSSMALRSILRQIMTGFGELSSLMETEADSETAAPNQDSAPTAGAQT
YRVASAEGGAAHGGVESAREGLVEGEEEGQVRVSRTGPEGRPSSRDTNNLVENGTLPILR
LAHFFLLNEDEDEEHPRGLTKEQIDNLVTRTYGQVNMEGEQGRACSVCINEYAQGNKLRR
LPCAHEFHIHCIDRWLSENNTCPICRQPILSSHQE
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggaccctcccggcggccgagacgaacgtcatcgtcaagcggagcggcttcggcgggag
gaggcatactatcacttcattaatgaactgagtgaggaggagtacagactaatgagagac
agcaatcttctgggaacacctggtgaagtcacagcagaggagctgaggcagcgtctggat
ggtgcaaaggagcgagtgtcatctcagccacgccctgaaccccgccctcagagcagtgag
gcagagggcagtagcggtgcagtcgagacaggtgctgagacgtctaatggagactctctg
ctggagtggttgaacacatttcggcgtacagggaatgccacacgtagtgggcagagtgga
aaccaaacttggcgtgccgtcagccgcaccaaccccaacagcggcgagttccgcttcagt
cttgagatcaacatcaaccacgagcaacctgagcctggagaacacagtgacacccctgat
ccaactgagctcccaatgccgccacctcctcctcctcctcctcctcctcctcccccccca
gtgtcatctgcctctgcacccacgaccccttacaacccctcaaggtctgcaccttactca
cttcaacaccccacgccgtactctacggccaggcccaccttgggaaggagggccgcggtg
cgccgcactcgcagcagcacggctccgcctgtaacgccgcctctgacctcacaggctcct
cccacgcctttgaggaggaacttgccttctgtgccaagctctcctcctccacaggctcca
ctcgcttttcagtcacaagagcaggatggtggtgctgtaaggggtcaaatacaggtcaca
acctcctcggttaacgcaggggaggggcagaatggaaatgaaggcccggactgccccacc
gctctgcctcagtccggcccccaggtggcgccagttgcccgtgagccacgaaacagcagg
actcgttcacgtggccgcatgcgccgggcggcgggagcaggtggggctttgtctcgctct
tcgagacgtagccggtcccccctggacagaaacccagcctccagcgttagccccacccat
agcagcagcgctgccccagtggagtccactggaagtacggctgttgcaatggagatgggc
gaggccaccgtagagccggctgctactacggatcctccggaggcaggtgaggaagagggg
gagactcctgcgtcaggcgctggaggtgtgcggcgccaccccacgatcatgctggacctc
caggtgcggcgcattaggccaggcgagaaccgggacagggacagcatcgctagccgcact
cgctctcgtgctcgggccgctgaaaacacggtcacctttgagagcgacagcggcggcttc
cgccgtaccatctcgcgctcagagcgcgcgggaatccgcacttacgtaagcactatacgc
atcccgctgcgccgcatttctgagacgggccttggcgagcccagctccatggcgctgcga
tctatcctgcgtcagatcatgaccggcttcggtgagcttagctccctcatggagacggaa
gcggactcagagactgcggcaccaaaccaggactccgctcctactgccggagctcagaca
taccgcgtcgctagcgccgagggaggtgcggcccacggaggagtggaatcggcacgagaa
ggtttagtggagggtgaggaggaaggacaagtgcgggtgagcaggactgggccggaggga
cgacctagcagcagggacactaacaacctggtggaaaacggcacattgcccatcctaagg
ctggcgcactttttccttctcaatgaagacgaagacgaggagcacccacggggcctcacc
aaagaacagatcgataatttggtcacacgcacttacggtcaggtcaacatggagggcgag
cagggtcgcgcttgcagcgtctgcatcaacgagtacgctcagggcaacaagctgcgccgc
ttgccttgtgcccacgagttccacatccactgcatcgatcgctggctatccgaaaacaac
acctgtcccatctgcaggcagcctattctgtccagccatcaggaatga
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