KEGG   Ctenopharyngodon idella (grass carp): 127505898
Entry
127505898         CDS       T08802                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RNF6
  KO
K22753  E3 ubiquitin-protein ligase RNF6 [EC:2.3.2.27]
Organism
cide  Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:cide00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cide04121]
    127505898
Enzymes [BR:cide01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     127505898
Ubiquitin system [BR:cide04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    127505898
SSDB
Motif
Pfam: RNF6_N zf-RING_2 zf-rbx1 zf-C3HC4_2 zf-RING_11 zf-C3HC4 zf-ANAPC11 zf-C3HC4_3 zf-RING_5 zf-RING_UBOX zf-RING_4 zf-RING-like zf-P11 Prok-RING_4
Other DBs
NCBI-GeneID: 127505898
NCBI-ProteinID: XP_051737796
LinkDB
Position
23:16138184..16146159
AA seq 695 aa
MDPPGGRDERHRQAERLRREEAYYHFINELSEEEYRLMRDSNLLGTPGEVTAEELRQRLD
GAKERVSSQPRPEPRPQSSEAEGSSGAVETGAETSNGDSLLEWLNTFRRTGNATRSGQSG
NQTWRAVSRTNPNSGEFRFSLEININHEQPEPGEHSDTPDPTELPMPPPPPPPPPPPPPP
VSSASAPTTPYNPSRSAPYSLQHPTPYSTARPTLGRRAAVRRTRSSTAPPVTPPLTSQAP
PTPLRRNLPSVPSSPPPQAPLAFQSQEQDGGAVRGQIQVTTSSVNAGEGQNGNEGPDCPT
ALPQSGPQVAPVAREPRNSRTRSRGRMRRAAGAGGALSRSSRRSRSPLDRNPASSVSPTH
SSSAAPVESTGSTAVAMEMGEATVEPAATTDPPEAGEEEGETPASGAGGVRRHPTIMLDL
QVRRIRPGENRDRDSIASRTRSRARAAENTVTFESDSGGFRRTISRSERAGIRTYVSTIR
IPLRRISETGLGEPSSMALRSILRQIMTGFGELSSLMETEADSETAAPNQDSAPTAGAQT
YRVASAEGGAAHGGVESAREGLVEGEEEGQVRVSRTGPEGRPSSRDTNNLVENGTLPILR
LAHFFLLNEDEDEEHPRGLTKEQIDNLVTRTYGQVNMEGEQGRACSVCINEYAQGNKLRR
LPCAHEFHIHCIDRWLSENNTCPICRQPILSSHQE
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggaccctcccggcggccgagacgaacgtcatcgtcaagcggagcggcttcggcgggag
gaggcatactatcacttcattaatgaactgagtgaggaggagtacagactaatgagagac
agcaatcttctgggaacacctggtgaagtcacagcagaggagctgaggcagcgtctggat
ggtgcaaaggagcgagtgtcatctcagccacgccctgaaccccgccctcagagcagtgag
gcagagggcagtagcggtgcagtcgagacaggtgctgagacgtctaatggagactctctg
ctggagtggttgaacacatttcggcgtacagggaatgccacacgtagtgggcagagtgga
aaccaaacttggcgtgccgtcagccgcaccaaccccaacagcggcgagttccgcttcagt
cttgagatcaacatcaaccacgagcaacctgagcctggagaacacagtgacacccctgat
ccaactgagctcccaatgccgccacctcctcctcctcctcctcctcctcctcccccccca
gtgtcatctgcctctgcacccacgaccccttacaacccctcaaggtctgcaccttactca
cttcaacaccccacgccgtactctacggccaggcccaccttgggaaggagggccgcggtg
cgccgcactcgcagcagcacggctccgcctgtaacgccgcctctgacctcacaggctcct
cccacgcctttgaggaggaacttgccttctgtgccaagctctcctcctccacaggctcca
ctcgcttttcagtcacaagagcaggatggtggtgctgtaaggggtcaaatacaggtcaca
acctcctcggttaacgcaggggaggggcagaatggaaatgaaggcccggactgccccacc
gctctgcctcagtccggcccccaggtggcgccagttgcccgtgagccacgaaacagcagg
actcgttcacgtggccgcatgcgccgggcggcgggagcaggtggggctttgtctcgctct
tcgagacgtagccggtcccccctggacagaaacccagcctccagcgttagccccacccat
agcagcagcgctgccccagtggagtccactggaagtacggctgttgcaatggagatgggc
gaggccaccgtagagccggctgctactacggatcctccggaggcaggtgaggaagagggg
gagactcctgcgtcaggcgctggaggtgtgcggcgccaccccacgatcatgctggacctc
caggtgcggcgcattaggccaggcgagaaccgggacagggacagcatcgctagccgcact
cgctctcgtgctcgggccgctgaaaacacggtcacctttgagagcgacagcggcggcttc
cgccgtaccatctcgcgctcagagcgcgcgggaatccgcacttacgtaagcactatacgc
atcccgctgcgccgcatttctgagacgggccttggcgagcccagctccatggcgctgcga
tctatcctgcgtcagatcatgaccggcttcggtgagcttagctccctcatggagacggaa
gcggactcagagactgcggcaccaaaccaggactccgctcctactgccggagctcagaca
taccgcgtcgctagcgccgagggaggtgcggcccacggaggagtggaatcggcacgagaa
ggtttagtggagggtgaggaggaaggacaagtgcgggtgagcaggactgggccggaggga
cgacctagcagcagggacactaacaacctggtggaaaacggcacattgcccatcctaagg
ctggcgcactttttccttctcaatgaagacgaagacgaggagcacccacggggcctcacc
aaagaacagatcgataatttggtcacacgcacttacggtcaggtcaacatggagggcgag
cagggtcgcgcttgcagcgtctgcatcaacgagtacgctcagggcaacaagctgcgccgc
ttgccttgtgcccacgagttccacatccactgcatcgatcgctggctatccgaaaacaac
acctgtcccatctgcaggcagcctattctgtccagccatcaggaatga

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