Ctenopharyngodon idella (grass carp): 127505927
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Entry
127505927 CDS
T08802
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127505927
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127505927
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127505927
03029 Mitochondrial biogenesis [BR:
cide03029
]
127505927
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127505927
Membrane trafficking [BR:
cide04131
]
Autophagy
Autophagosome formation proteins
ULK complex
127505927
Mitochondrial biogenesis [BR:
cide03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
127505927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
DUF6950
Motif
Other DBs
NCBI-GeneID:
127505927
NCBI-ProteinID:
XP_051737868
LinkDB
All DBs
Position
23:complement(9129195..9149526)
Genome browser
AA seq
1625 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTELAVQTVLDLKHAIQAKYKIAIQHQVLVVNGGECMVAERRVC
SYSAGTDTNPIFLFNKEMILCDRAPTIPKTTFSIENEMELKVEESLMMPAVFHTVASRTQ
LAVEMFEVAKKLCSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLLKFDTAYTHYQQ
DFEDIKLKLTKLGTAVSVMAKIPLLECLTRHSYRESLEKSCSPHPRTTDEEDYNEDDEVG
ETSAQSAILCPADSQKNLKTPSPVSASGETSSQASSSPQDRLKSSCSLKAALQEEEESPE
RGAIPCFNVTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTECRETITKLDNQ
NMKAIKGLEDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHA
NQLMIMLTNHRKLLDIKQKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLT
ELLERVRVVEALSTVPQMYCLAVVEVVRRKMFIGHYRQWANALVRDGKNLYEAEKAKRET
FGKLFSKFILGKSFLRNRLFRGLDSWPPSSFCTRKPRKFDFELPDISLSDLQYLKSCCPS
EVQPYLRVPTLCDFEPLNHHVEVLHQLVQAAQSVDEMSQTITDLLNEQKISCSQSAQRST
ALTPRSESTTAVTSTSTKTLSTLSLKPPDCQPVALPGPLEDLSPDSIDAQTFDFETIGHP
NMDPVLQQGSLDLDSLAESPESDFMSAVNEFVIEETLMSPNPISDPTSPEMMVESLYSSV
INAIDSKRIQDTTTLQKENSKIAALKLSADRYRSAAEESQNNLRKVKEDLYHFRGLVLKE
QRDFGFALKTMTIEVRNALNSVRYFHEDEQQSNLQSLKDDHEKQILTLTEELEGNRKIVR
DVQRAMLELEGLVERKEKEISQLESERERSMQELQDLHKQTVQDLEEKILKQSEELKAAL
LSKDELAGQLDNLHFEIEHGQQKIRQEMENAEKVHLQELETRLNQQHEAELQSFRLEKES
ALEKLVQDNLVKLRDLMDSHSAELKEREGRSKDLEARITELADARCKLEVEMALKEAEME
DMRLQYEEAKSSQEEVLKSELTTQTTTLQMQIDTLNQQLQQKNEEYEVGLAELRALMRLE
KDHCISELVDRHEKESTLLHREFSALKQKLQDAEKDCEERVQKIQRDHEDQLAALQREKQ
DEQRAFQEKEQDLQIVIGDLQAENSLLSGRLEQERAEALQRAEMEKEEAVKAALQEALRD
FQLQKEETETRLLGQIELLESQLKDRQSTDIVAASVEQTEAGEEAGAALSLDSGQWTEER
ASLLAKLELLERTKNEEMQNLKTSLIAEQQTNFNTVLTREKLKKEQIINDLTEKLKNVMQ
QQEKDKGLIETLSEDRASILQEKKQMEEELNRLRSTVLVSSSFFPPNPIPVITEAHGACG
PAHTEVLSPSTPDPERLASMAAFKDEERVESAVEASMMTVHDNSMLSEEKQRILILERTL
HMKEEENKRLSQRLMSQSMSSVSSRHSEKIAIRDFQVGDLVLIILDERHDNYVLFTVGPT
LYFLHSESLTALDLKPATGATRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVP
WNKKV
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgtatgtgtttcaagtcaacaacggaagcacattaacgtttgacactgaactt
gctgtccaaactgttttggaccttaaacatgccattcaggccaaatataaaattgcaatc
cagcaccaggtgctggtggtcaatggaggggagtgtatggtggcagagaggcgtgtgtgt
agttacagcgccggaacggacaccaacccgatcttcttgttcaacaaagagatgatcctg
tgcgaccgagcgccaaccatccccaaaacgaccttctccatagagaatgaaatggagctg
aaagtggaggagtcactcatgatgcctgccgtctttcacaccgtcgcctcccgcactcaa
ctagctgtggaaatgtttgaggttgccaagaagctttgctcgttctgtgagcgtctggtc
catgatgaacaccttcagcaccagggatgggcggccatcatggctaacctggacgactgt
accctgtcctatcaaaaactcctcttgaaattcgacactgcttacacacattaccaacag
gattttgaagacatcaaattaaaactcaccaagcttggcactgctgtctcggtcatggcg
aagattccactcctagagtgtttgactcggcacagctacagagaaagcttggagaagtcc
tgctcccctcacccaagaaccactgatgaagaagactataatgaggatgatgaagtagga
gaaacatccgcccagtctgctatcctctgtcccgccgacagccagaagaatctaaagaca
ccttcgccggtctctgcttcaggagaaacgtcatcccaggcgtcctcctctcctcaggac
agactgaagagcagctgtagtctaaaagcagctctacaggaagaggaggagtctccggag
aggggagccataccctgttttaatgtcacactgctggattggatcaacgttcaggacaga
cctaatgatgtggagtcggtagtgaggaagtgttttgactcgatcaacaggctcgatcca
cgaattatccaaccctttctaactgaatgccgtgagacgattaccaaattggataatcag
aacatgaaggccatcaaaggtcttgaggacagattgtatgcacttgaccagatgatagca
agctgtaaaaagttggttaatgaacagaaggaacttgctcagggatttcttgccaatcag
aagagggctgaaaacctgaaggacacctcggtgctacctgacctgtgtctgagtcacgcc
aaccagctgatgatcatgctgaccaatcacaggaagctacttgacatcaagcagaagtgt
accactgccaaacaggagctcgccaacaaccttcaagtccgtctcaaatggtgctgctac
gtgatgcttcacgctgatcaggatggagagaagctacaggctctcctgaggctgctgacg
gagctgctggagcgcgtacgggtggtggaagcgctcagcaccgtgccacagatgtactgt
ctcgccgtagtggaggtggtcaggcgcaaaatgttcataggacactacagacaatgggcc
aatgctcttgtcagagatgggaaaaacctctatgaggcagaaaaagcaaaaagggaaacc
tttgggaagctcttcagtaagttcattttagggaaatcgttcctcagaaatcggttgttt
cgaggactggactcttggccaccctcttcgttttgcactcgaaagcctcgaaagtttgat
tttgagcttccagatatttccctgagtgacctgcagtatctcaagtcctgttgtccttcc
gaggttcagccttacctcagggtccccacattgtgtgacttcgagcctcttaaccatcat
gttgaggttctccatcagctggttcaggctgcgcagagtgtggacgagatgtcacaaact
atcacagacctactaaatgaacaaaagatttcctgtagccagagtgctcaaagatccact
gcattaacacccagatctgaaagcacaactgcagtcacctctacctccaccaagactttg
tccactctcagtttaaaaccaccggactgccaacccgtggcgcttcctggtcccctggag
gacctatcaccggacagcatagatgcccagacctttgactttgaaaccattgggcacccc
aatatggatcctgtattacagcaaggctcgttggacttggactcattggcagaaagtcca
gagtcagacttcatgtcagctgttaatgagtttgttatcgaggagaccttgatgtcacct
aatcccatcagtgatcctacaagcccagagatgatggtggagtctctctactcctctgtc
ataaatgcaatcgatagcaagcgtatccaggacactactacccttcagaaggaaaattca
aagatcgcagctctcaagctatcagcagacaggtaccgttccgctgcggaagaatcccag
aacaatttaaggaaagttaaagaagacctttaccactttcgaggtcttgttctgaaggag
caacgagactttggatttgccctgaaaactatgaccattgaggttcgaaacgctctcaac
agtgtcagatactttcacgaggatgaacaacaatccaatctccagagtttgaaggacgat
catgaaaagcagatacttactctcacggaagagcttgaaggcaatcggaagattgtccga
gacgtccagagagcaatgctggaattggaggggcttgtggagcgcaaggagaaggaaata
tcacagctggagagtgagagggaacgttctatgcaagaactgcaagatcttcacaagcaa
actgtgcaggaccttgaggagaagatcttgaagcaaagtgaagaactgaaagctgcattg
ctgtccaaggatgaacttgctgggcaactggataacctgcactttgagatcgagcatggc
caacagaaaatcagacaggagatggagaatgcagagaaggtgcaccttcaagaactggag
acacggttgaaccaacaacatgaagcagagctgcaatctttcagattggaaaaagaaagt
gcacttgaaaaacttgtccaggacaacctggtgaagctaagagatctgatggattcccat
tctgccgaactcaaggagcgagagggacgctcgaaagacttggaggctcgcattacagaa
cttgcggacgcccgctgcaaactggaagtcgagatggctcttaaagaggctgaaatggag
gacatgaggctccagtacgaggaggccaaaagcagccaagaagaggttttgaaatcggag
cttactacccaaacaaccaccttgcagatgcagattgacacgttaaaccagcagctccag
cagaagaacgaagagtatgaggtgggcctggccgagctccgagcactcatgaggttggag
aaggaccactgcatctctgaactcgtcgatcggcacgaaaaggagagcaccctgctccac
cgtgagttttcagcgctcaagcagaagttgcaggatgcggagaaagactgcgaggaacga
gtccagaagatccagcgcgatcatgaggaccagcttgctgccttacagagggaaaagcag
gatgagcagagggctttccaagagaaagagcaagacctacagattgttatcggggacctg
caggcggaaaactcactactgtcgggtagactggagcaggagagggcggaggccctgcag
agggcagagatggagaaagaggaggcagtcaaagctgcattacaagaggccttaagagac
tttcaacttcaaaaagaggagaccgagacaagactgttaggacaaattgaactacttgaa
agtcagctcaaagacagacaatccactgacatagtggcagcttctgtagagcagacagag
gctggtgaagaggccggcgctgcattgtcactagacagtggccagtggaccgaggagagg
gcatcgctcttggccaaactagagcttctggaacgcacaaagaatgaggagatgcaaaac
ctgaagacctcgcttattgctgaacagcagacaaacttcaatactgttctgacccgggag
aaactcaagaaagaacaaatcatcaatgatctcacagagaagctcaaaaacgtgatgcag
caacaagagaaagataaaggcctgatcgaaacactctcagaggaccgcgcctccatcctt
caagagaagaaacagatggaggaagaactcaaccgtctgcgaagcaccgtcctcgtctct
tcatccttctttcctcccaatcccatccctgtcatcacggaggctcacggcgcctgtggc
cccgcccacacagaagttctgtcaccgtccacccctgacccagaaagactggcgtctatg
gctgcattcaaggatgaggaaagggtggagtcggccgtggaggccagcatgatgacagtg
catgacaactctatgctatctgaagagaaacagcgcatactgattttggaaaggacctta
catatgaaggaggaagagaacaaaagacttagtcaaagattgatgtcacagagtatgtcg
tccgtgtcgtcacggcactctgagaaaatcgctattcgagattttcaggtgggcgacttg
gttctcataatcctggacgagaggcacgataattacgttctcttcactgttggtcccacc
ctttatttcctgcactcagagtccctcactgcactggacctcaaaccagcgacgggagca
acaagacggccgtgggttttaggaaaagtcatggagaaggaatattgccaagctaaaaag
gcccaaaaccggttcaaagttcctctcggcaccaaattctacagagtaaaggccgtgcca
tggaacaagaaagtgtaa
DBGET
integrated database retrieval system
