Ctenopharyngodon idella (grass carp): 127505945
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Entry
127505945 CDS
T08802
Name
(RefSeq) nucleoporin p58/p45 isoform X1
KO
K14307
nucleoporin p58/p45
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
127505945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127505945
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
127505945
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
GCP_N_terminal
Nup49_C
FapA
PSY3
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
127505945
NCBI-ProteinID:
XP_051737900
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All DBs
Position
23:14176806..14188886
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AA seq
591 aa
AA seq
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MSSFNFGTSTLGSTATGGGFSFGAATSTPAAGTGGFTLGGFGTPTSAPAATSTTSTLGFG
SSLFAQKPTTGFSFNTPASGAAASTTGLTLGSLTTSTAGSTGFSLGFGKPAASAAPFSLT
TTTSAPAGTGLTLGSVLTSTAPQTSSTGFSLNLGGGATTSSAPAPGFSFSSSLFSNPTLT
GLGQSTLGGPLSLGGLVSTSVASTSAQAPSLGLGGVDFSTSSEKNTDKLSSTRPEDSKAL
KDENLPGPICQDVDNFQKFVKEQKQVQEEISRMSSKAILKVQEDIKTLRQLLSVCASGLQ
RNSLSIDKLKLETSQELKNADIALRTQKTPPGLQHENTAPSDYFRSLVEQFEVQLQQYRQ
QIEELENHLTTQSSGSHITPQDLSLAMQRLYQTFVALAAQLQGVHENVKTLKHQYLGYRR
TFLDDSTDVFESKRVAGKKWQSSPHVTTGPAPFGSVPNAAAVAMAATLTQQQQPAPGPQA
PLGASFGTPFSSGIGTSMGSSSLGAFGSGPGFGGTTGGLSFGFSSSKPSGGSLSAGFGTS
NTSGFNFSNPGINASAGLTFGVSNTQTPGFGTGGPLLQLKKPPAGNKRGKR
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctttaacttcggcacaagtaccctcgggtccaccgccaccggcgggggcttc
tcatttggagctgcgaccagcacacctgccgcaggcacgggtggtttcacgctcggaggt
tttggcacgccgacctccgctccggctgccactagtaccacctccacactgggatttggg
tccagtttatttgcacagaaaccaacaactggattctcctttaacacacctgcctcaggg
gctgctgcatccactactggccttactttagggagtcttaccacctcgactgctggatcc
actgggttcagcctgggctttggaaagccagcggcctctgctgcaccattctcgctgacc
accaccacctctgcacctgcaggcacaggcctgactctgggctccgtcctcacctccaca
gcccctcagaccagctccactggcttctcccttaacttgggaggaggagccaccacttca
tctgcacctgccccgggtttttcctttagttccagtctcttttccaaccctaccttgaca
ggtttgggacagtctacattaggtggacctttgagtctgggtggtttagtctctacctct
gtcgcaagcacctctgcccaagcacccagtcttggcctgggtggagtagacttcagtact
tcctctgaaaagaatactgacaagttatccagcaccagaccagaggacagtaaagccctc
aaagatgagaacctgcctggtccgatctgtcaagatgtggacaactttcagaagtttgtc
aaggaacagaagcaagtccaggaagagatcagcaggatgtcctctaaagccattctcaaa
gtgcaggaggacatcaagacactcagacagctgctctctgtctgtgccagtgggctgcag
agaaattcgctctccatagacaaactgaagttggaaacttctcaggaattgaagaatgct
gatattgcacttcgcacccagaaaacccctcctgggctccaacatgaaaacacagcacct
tctgattatttccggtccctggtggagcaatttgaggtgcagttacagcagtaccgtcag
cagattgaagaactcgagaatcatctgaccacccagagcagtggctcccacatcacccct
caagatttgtccctggccatgcagagactctaccagacgtttgttgctcttgctgcacag
ttgcagggagttcatgagaatgttaagactctcaaacatcagtacctgggctacagacga
accttcctcgatgactccactgacgtgttcgagtcgaaacgtgttgccggcaagaaatgg
cagagctctccgcacgtcaccacaggccccgcccccttcggcagcgttcccaacgcagca
gccgttgccatggctgccactctcactcagcagcagcagccggctccaggaccacaggcg
cccctgggggccagttttggcactccattttcctcgggtattggcactagcatgggctca
tcaagcctcggagcgtttggtagcggccctgggtttgggggcacaacaggaggtttgtcg
ttcgggttttcctctagcaagccatctggagggagcctgagcgcaggatttggaacatct
aacacctcgggcttcaactttagtaacccaggcatcaatgcatcagctgggctgaccttt
ggcgtttccaacacacaaactcctggatttgggacaggtgggccactgctacagctcaaa
aaaccaccagccggaaacaagaggggcaagagataa
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