Ctenopharyngodon idella (grass carp): 127505958
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Entry
127505958 CDS
T08802
Name
(RefSeq) short transient receptor potential channel 1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127505958
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127505958
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
MTR4-like_stalk
LHD_TRPY1
TALPID3
Motif
Other DBs
NCBI-GeneID:
127505958
NCBI-ProteinID:
XP_051737936
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Position
23:complement(1434334..1466013)
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AA seq
797 aa
AA seq
DB search
MHISALPYSLSVIMAALYQGTDVSSPDKYLALKDVREVKEETTLDEKLFLLACEKGDYYM
VKKLLEEKRHGELNINCVDVLGRDAVTISIENENLDILQLLLDHGCQATDALLVAIDSEV
VGAVDILLNHRPRRSSKPSIAKVIQRIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQD
ISLPRPHAVGCECTLCNAKNKKDSLRHSRFRLDIYRCLASPSLIMLTEEDPILRAFELST
DLKELSLVEVEFRNDYEELAKQCKMFAKDLLAQARNSRELEVILNHTSNEDHVDKRGLLE
ERMNLSRLKLAIKYNQKEFVAQSNCQQFLNTVWFGEMASYRRKHTCLKILYVLSVVLLWP
LLSVCYLLGPRSRVGQVIHTPFVKFIIHSASYFTFLLLLNLYSLVYNGEKKNFMGPPLQL
IDYLLILWIIGMVWSDVKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALRVVAHSKFKN
VELDRKNWDAFHPILVAEGLFAFANVLSYLRLFFMYTTSSILGPLQISMGQMLQEFGKFL
GLFLLVLISFTIGLTQLYGKDQKDPSTAKNETKDCGGIFCQQQSNDTFHTFMGTCYALFW
YIFSLAHVALFITRISYTEELRSFVGALIVGTYNIVVVIVLTKLLVAMLHKSFRQIANHE
DKEWKFARAKLWLSYFNDKCTLPPPFNILPSPKTLCYLVISLSKWICSHTSTGKVKRQNS
LKEWRNLKQKRDENYQKIMCCLVHRYLTSTRQKMQSTDQATVENLNDLRQDLSKFRNEMR
DLLGFRTSKYAMFYPRS
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcagtgctttgccgtactctctctccgttataatggctgctctatatcagggc
acggacgtgtcctcaccggataaatatctggcgttaaaagacgtcagagaggtgaaggag
gagaccactctggacgagaagctctttctgctggcctgcgagaagggagactactacatg
gtaaagaaactcctggaggagaaacgacatggtgaattaaacattaactgtgtagatgtg
cttgggagagatgctgtgaccatttcaatcgagaatgagaatctagacatactgcagttg
ctcttggatcatggctgtcaggccacagatgcattattagtggctattgattcagaagtg
gtaggagcagttgacatcctgctaaaccatcggcccaggcgttcctccaagccttctatt
gcgaaagtgattcagcgcattcaaaacccagagtattccacgaccatggatgttgctcca
gtcattcttgctgcccacaggaacaattatgagattttgaccatgctgttaaagcaagac
atctctctgccccgtcctcacgctgtagggtgcgagtgcactctctgtaatgccaagaac
aagaaggacagtcttcgccactcaaggttccgtctagatatctaccgatgcctcgccagc
ccatccttgatcatgctaacagaagaagaccccattctgagagcatttgagctcagcact
gatctgaaagagctgagcctggtggaagtggagtttcgaaatgattatgaagaacttgcc
aagcagtgcaagatgtttgccaaggacctgctggctcaggcccgcaactctcgtgagctg
gaggtcatcctgaaccacacgtccaatgaggaccacgtggacaagagaggcctgctggag
gagcgcatgaacctcagtcgcctcaaactggccatcaaatacaaccaaaaagagtttgtc
gcccagtccaattgtcagcagttcctgaacacggtgtggttcggcgagatggcgagctac
cgccgcaagcacacatgcttaaagatcctgtatgttttgagtgttgttctgctgtggccg
ctgctgtccgtctgctacctgctgggacctcgttctcgcgtgggccaggtcatccacaca
ccttttgtcaagttcatcattcacagtgcatcttacttcaccttcctactgcttctaaac
ctgtattcactggtctacaacggggagaagaagaacttcatgggtccccctttgcagttg
atagactaccttctcattctctggatcataggcatggtgtggtcagatgtgaagcgtcta
tggtatgagggattagaagattttctggaagagtcacggaaccagctaagtttcgtcatg
aactcactttatttggccacctttgctctaagagtggtggctcacagcaagttcaagaac
gtcgaattagacaggaaaaactgggatgcgttccatcccatcctggttgctgaagggctt
tttgctttcgccaatgttctgagctatctgcgtctcttcttcatgtacaccaccagctcc
atcttggggcctttacagatctccatgggtcagatgttacaggagtttgggaagtttctt
ggcttattcctgctcgtgctcatctctttcaccattggcttgacacagttgtatggaaaa
gaccagaaggatccatccacagccaaaaatgaaaccaaggactgtgggggcatcttctgt
cagcagcagagcaacgacacctttcacacgttcatggggacatgttatgccctcttctgg
tacattttctctctggcacacgtggctctgtttatcacaaggatcagctacacagaggag
ctgcgatcatttgttggtgctcttatagtcggaacctacaacattgttgtagtcatcgtt
ctcactaaactcctggtggctatgctgcataagagcttcagacagattgctaaccatgaa
gataaggagtggaagtttgctcgggctaagctgtggctcagctactttaatgacaagtgc
acactgcctccacccttcaacatcctcccctcacccaagactttgtgctacttggtgatc
agcctgagcaaatggatctgttctcacacctccacaggcaaggtcaagagacagaatagc
ctcaaggaatggaggaacctgaagcagaaaagagacgagaactaccagaagattatgtgc
tgtctagtgcaccgttacctgacctccacaaggcagaagatgcagagcacggatcaggcc
acggtagagaacctcaacgatctgcggcaagacctatctaagttccgcaatgaaatgagg
gaccttttgggcttccgcacttccaaatatgccatgttctaccccagaagctaa
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