Ctenopharyngodon idella (grass carp): 127506003
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Entry
127506003 CDS
T08802
Name
(RefSeq) protocadherin-8-like
KO
K16499
protocadherin delta 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cide04515
]
127506003
Cell adhesion molecules [BR:
cide04515
]
Cadherins
Protocadherins
127506003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_3
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
127506003
NCBI-ProteinID:
XP_051738017
LinkDB
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Position
23:complement(3907388..3910689)
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AA seq
895 aa
AA seq
DB search
MMRGTPSSRVLWHWWTVLLAFVSLPFLSTLAVGMIMKYQTYEEDALSTVIGNLAKDMFLN
PSDDSKTNFKMMKQFNASFIRLREKDGQLTIGERIDREKICKNAVQCLIAFDVVSLFSEQ
FQLIHIEVEVKDINDHAPEFPRKESTLEISENAALGTRISLDVAMDEDVGSNYIQSYQIS
VNSHFTIDVLSRADGVKYAELVLMKELDRETQASYVLELVATDGGNPPRSSTTKINVNVK
DFNDNSPVFSRTNFSVDILEDSPVGFLLLDLNAVDPDDGLNGEVVYGFGNQVPLEIRQRF
SIDRKSGQLTLRSPIDFESKKTYEFDIQASDLGPNPRPSICKVVVQVQDVNDNAPEITIT
PMTPVTAEIAYITEAAAKGSFVALISTADRDSGTNGQIHCTLYGHNDFKLQQAYEDSFII
VTTSPLDREKIAEYNLTVVAEDLGSPPLRTTKQYTIRLSDENDNAPVFSKPVYEESLMEN
NAPGAYITTVVARDLDLGQNSEISYKLLDTYIIGSPVSTFVSLDPATGSLYALKSFNYEV
LKQLQLRIQASDGGSPQLQGSAIINLKIVDQNDNAPSITQPALNNGSAEVLLPKDAPSGY
VVTQILARDADEGVNAELSFRISEGVSMFSINRATGEIYLNQELNYKDYENLRITVSVSD
NGRPSLTTVVTIDFSIIAGSLPSDRSIFRHRTDEETWEGDHSVVIIVVLAGSCALLLLAI
ILIATSCNKRKTDNRGDSYSGKEDIVKADGNHCDPLIPMHSDIVFDIQPSYSNKPNFSGF
IQTCSDISCSSEDGTCVFDLEDKSHGVKSEDYSNPPGYGNAMRLIKIWKGTSTISAGDPQ
FSGKDSGNGDSDFNDSDSDISGDGLRKGKYQNKVQKTNVCVCVRERERPGAAHSV
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgatgagagggactcctagcagtcgagttttgtggcattggtggacagtgcttctcgcc
tttgtgtcactgccttttttgtctactttagcagtgggaatgatcatgaaatatcagact
tatgaagaggacgctttatccactgtcatcggaaacttggccaaggacatgttcttaaat
ccctcagatgactcgaagaccaatttcaaaatgatgaagcagttcaatgcatcttttatt
agactccgagaaaaggacggacagctaacaattggagaacgaatagacagagaaaaaata
tgtaagaatgcggtccagtgtctcattgcattcgacgttgtaagtctcttcagtgagcaa
tttcaattaattcatattgaagtggaagtaaaggacatcaatgatcacgctcctgagttc
cccagaaaggaatcaactttggaaatttcagaaaacgcagcactcggcactagaatttct
ttagatgttgctatggacgaggacgtgggttcgaactacattcaaagctaccaaatatct
gtcaacagtcactttactattgacgtgttgagcagagccgatggggttaaatatgcggag
ttggtgctaatgaaagaactagacagggagacacaagcctcctatgttttggagctcgtc
gcaacagacggaggaaatccaccaaggtccagcaccacaaaaatcaatgtcaatgtaaaa
gactttaatgacaatagccctgtgttcagccggaccaatttttcagttgatatacttgag
gactcgccggtggggtttttgcttttggatttgaacgcggttgatccagacgatggtttg
aatggggaagttgtgtatgggttcggaaatcaggtgcccttggagatccgacagcgtttc
agcattgaccgaaaatccgggcagttgacgctcaggagcccgattgattttgagagcaag
aaaacatatgagttcgatatacaggcatctgacttgggtcctaatccgagaccatccatc
tgtaaagttgttgttcaagtgcaggatgtgaatgataatgcaccagaaatcaccattact
cctatgaccccagtcactgcggaaattgcgtacatcacagaggctgctgctaaaggaagc
tttgtggctctgatcagcaccgctgacagggactcgggcacaaacggacagattcactgt
acactctatgggcacaatgacttcaaactccagcaagcctatgaggacagttttattatt
gtaacgacatctccacttgacagagaaaaaattgcggagtataacttaacggttgttgcc
gaagacctgggatcacctcccttaagaacaactaagcaatatactataaggttgagtgat
gagaatgacaacgcccctgtgtttagtaaacctgtctatgaagagtccttgatggagaac
aatgcaccaggtgcatatatcacaactgttgtggccagagacctcgacttaggacaaaac
agcgaaatcagctataagctcctggacacctacatcataggctctccggtgtcaactttt
gtctctctagatcccgctacgggctcgctctatgcgctcaaaagtttcaactacgaggtc
ctcaaacagctacagctacgtattcaagcgagtgacggaggctcgccacaactccaaggc
agcgcaataatcaatctaaaaatagttgatcagaatgataacgctccctctatcacacag
cctgcgctaaataatggttctgccgaggttctactgcccaaagacgcaccttcaggttac
gttgtaacccagatacttgctagggacgctgacgaaggtgtcaatgcagaattgtcattc
agaatctcagagggggtctctatgttctccattaatagagccaccggagaaatttatctg
aatcaagaactaaactacaaagattacgagaatttgagaataacagtaagtgtcagtgac
aacggaagaccttcactaactacagtagtcactatcgatttcagcatcattgcaggatct
cttcctagtgaccgcagtatattcaggcacagaactgacgaagagacatgggaaggggat
cattcagtcgttataattgtggtactggcggggagctgcgcactattacttttagcaatt
attcttattgcaacttcttgtaataaacggaagacagataatcgaggcgacagctattct
ggaaaggaggacatagttaaggcggacggaaaccactgcgacccactaattccaatgcac
agtgacattgtgtttgatattcagccttcttattcaaacaagccaaacttttctggcttt
atccagacatgcagcgacatttcctgcagttctgaagatggtacttgtgtctttgatcta
gaggacaaaagccacggtgtcaagtcagaagattattccaatccacctggttatggtaat
gctatgagactgattaaaatttggaaaggcacctcaactatatcagcaggagatcctcaa
ttcagtggaaaggacagtgggaatggagacagcgacttcaatgacagtgattcagatata
agtggcgatggactgagaaaaggcaagtatcaaaacaaagttcaaaagactaatgtgtgc
gtgtgtgtgagagagagagagagaccgggggctgcccattcagtttaa
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