Ctenopharyngodon idella (grass carp): 127506028
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Entry
127506028 CDS
T08802
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase rpap2
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127506028
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127506028
Enzymes [BR:
cide01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
127506028
Protein phosphatases and associated proteins [BR:
cide01009
]
HAD phosphatases
Fcp/Scp phosphatases
127506028
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127506028
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Med4
Motif
Other DBs
NCBI-GeneID:
127506028
NCBI-ProteinID:
XP_051738060
LinkDB
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Position
2:complement(18949250..18964019)
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AA seq
612 aa
AA seq
DB search
MEAGEVTRKISSSKSKKKGGKGTQAISAAVEARRREAIKDALRQKLELERKALQVVERLL
EDSVTEEFLIDCAWHITSTNYKDTVEERSIAKLCGYPVCPNKLINVPTQRFKISTKTNRV
YDITERKCFCSNFCYKASKCFEFQISKTPLWLRNEESPPEVKLMKEGDRGSSGQEIKLAD
KPIKEADIENPVPDIPESYKDSPPFSQSDNSDIEQDFVSSVVYGPHKHARVHWGKLPKRD
GVSEDGSSAEIKQYAHPEPTQGENNDESGSSQTPQPQKDLTDCLPELDKTTSAESVIEGI
LEPLNQCSLTDTATQQETNSLSQPEIGNSLTTAGGLNITQVGMSKRGAAGLKGLLKDHNK
AKTSPTAVNLCLLERLQQTFMEWRTEETMKFLYGPEYASGTESTAQEVEELDEDDLDEAE
MEMDLRWDSGSTFTPRAPAPDIETLRKETESLELRVREFYKGVCVLPEELETAIKETEDT
QDSVKDPPLPLVDSHAQHLIQKRIAVEKLSRSLRDVVGPLCLTLSDVINDINNLVRTFRF
TNTNIIHKIPEWTLIAVVLLSVLTEVSPLLRESLASPSSLEYISSLMRELKLEDKDLHNL
VLLFKPCVTPQT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaagccggtgaagtgacgagaaagattagctcttcgaaatcaaaaaagaaaggtgga
aagggtacccaggcgatttcagcagcggttgaggcgagaaggagggaggccattaaagac
gcgctcagacagaagcttgagttggagcgcaaagccctgcaggtggttgagcggctgctg
gaggacagtgtgacagaggaattcctcatcgactgtgcatggcacatcacttctaccaat
tacaaagacacagtggaagaacggtccattgccaaactatgtggatatcctgtgtgtcct
aataaactaatcaacgtgcccactcagcggtttaaaatatccactaaaactaatagggtc
tatgatattacagagcgcaagtgcttttgcagtaatttctgctacaaagcctccaaatgt
tttgagttccagatatcaaaaactccactttggctcagaaatgaggagagtcctcctgag
gttaagctgatgaaagaaggagacagaggcagctcaggacaggagataaagttggcagac
aagcctataaaagaagccgacattgagaatcctgtcccagacattcctgagtcttacaag
gactcccctcccttcagccagagtgacaacagcgacattgagcaagactttgtctccagt
gtggtgtacggaccgcataaacatgcacgggttcactggggaaaactgccaaagagggat
ggagtgagtgaggatgggtcgagtgctgaaattaagcaatatgcacatcctgaacctacg
caaggagaaaataatgatgaaagtggatcttcgcaaactcctcaaccacagaaggacctg
accgactgtctacctgaactggataaaaccacatctgcggaatctgttattgaaggaatt
ctggagcctttgaatcagtgtagtctgacggacactgcaacccaacaggaaactaactca
ctttcacagcctgagattggcaactctctcactaccgccggtggtctgaacatcacccag
gtgggcatgagcaagagaggagctgcaggcctcaaaggattgttgaaggatcataacaaa
gctaaaacatctcctacagctgtcaatctgtgcctgctagagcgtctacaacaaaccttt
atggagtggagaactgaggaaactatgaagtttctttatgggcctgaatatgcttcagga
acagagtctacagcacaggaagtagaggaactggatgaagatgacctagatgaggctgaa
atggagatggacttaagatgggacagtggaagtaccttcactcccagagctccggctcct
gatattgagacactgcgaaaagaaactgagtcgctggagctgagagtgagggagttttat
aaaggagtgtgtgttctgcctgaagagcttgagactgccatcaaagagactgaagataca
caggacagtgtgaaggaccctcctctgcctttggttgattctcatgcgcagcacctgatt
cagaaacgcattgctgtggagaagcttagccggagcttgagagatgttgtgggacccctg
tgcctaacattgagtgatgtcatcaatgacataaataatctggtcaggacattcaggttt
acaaacacaaatatcattcacaaaatcccagaatggactttaatcgctgtggttcttctg
tcagtgttaacagaagtgtcaccattgctgagagagtcactggcaagtccgtcttcgttg
gagtacatctcctctctcatgagagagctgaaactggaggacaaagatctacacaacctt
gtgctgctcttcaaaccctgtgttactccacaaacataa
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