Ctenopharyngodon idella (grass carp): 127506103
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Entry
127506103 CDS
T08802
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
127506103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127506103
Membrane trafficking [BR:
cide04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
127506103
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
SH3_1
SH3_2
PH
SH3_9
Motif
Other DBs
NCBI-GeneID:
127506103
NCBI-ProteinID:
XP_051738184
LinkDB
All DBs
Position
23:15901579..15925689
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AA seq
1240 aa
AA seq
DB search
MIKAPSSDPQGSSHNNDPQKDYFAKEQLINPSLMSGCRVQVQPVLSEPCYENRLNRLNCQ
AQSVPSRTVRLFSTQTKCEDSSSLRGPPVTPQAWSGLASFRVMGSFKKLRTSVLQGIQNR
NNAMAAGQERNMSLMLEDGGSFLVTKREVATNQTKEIDKVSMTNGTSQTGKMSSVSDEED
CEEEEGGFQRNSHFSRSIRKAYGAGRISLLDIVKTDSPSTSEPSPSSTVESVVPCKNLET
QENVLKRLSKSADNLHVFKSHFRRKATSTEPQNPEGTHTIILQRTTSSSSVDLQERDSVR
RQSPMRTRGHLQKLVGSLTDLTVKRKNTSDPPPRVPLSPLSQLHDDYSRRTSCVSMSGRQ
RRPLPTPSKAQQANTHEHIPTLHSAPSCPAVFSSTLDESLEPPSKTTALISDSVQVTMSS
TDFCSDAPVCPLEKYCEPMECHQNGINDHYSQMPKQCSSPSQKQTVNGINANLECLWTEE
KETEDLETSSDDLVRNAFLKSDEISASAASSVTNTCSSESPLITPTTPNSPAFSSDSPFS
VVPRKRAGRSRPRPVSDYGQLASTKYCIPEEDRESENMDYTSQKDYNSSGSYIESNRPEN
GHVCTQTESRKRRPISVIGGVDLYSSPTAEQKDDTESLPSPVSRPPVPSHRVPPYRAVSV
RLRPCIFSQSTPIGLDRMGRRRGRRVLSDGSSDPMLDDSVSEEDGSFEELTEGTPYLQPE
VDLFTLNQYIHSGHAVYAEALWDHVTMEEQELAFKAGEVIRVLDVQEQDWWWGMVGDREA
WFPSSFVRVRVNQGDSSSDSVESVPDAEESVPSDAHKQNSEHREQMRANVVKEIMDTERV
YIKHLKDICEGYIRQCRKHPGMFTDAQLKTIFSNIEDIYRFQRKFLKDLEKKYNSENPHL
SEIGSCFLQQEEGFSIYSEYCNTHPVACAELQRLMKQGRYKHFFEACRLLQQMIDISISG
FLLTPVQKICKYPLQLGELLKYTPKDHSDYAGVCAAHKAMKNVASLINERKRRLESIDTI
AHWQVAILHWAGDDVLTRSSELIHSGELTRIVRPGKTQQRSYFLFDHQLVFCKKDVLRRD
LLHYRGRMDTDQLEPIDLPDGRHTELGLLKNAFLLRHAENLNVLCVLCCKKSQDKERWLQ
AFARERRRVQEDQEMGMEITEAQRKQAVHNARKSKKGKMKKMNYSGHPVPPHHQPLHPLH
QRHVTVPTSIPQQQVFSLAEPKKKPAHLLYSLARSALFRK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgataaaggcaccttcgtcggacccgcagggctcctctcacaacaatgacccgcagaag
gactatttcgcaaaggaacagctgataaatccaagtctgatgtctggttgtagggtccag
gtgcaaccggtgctatccgagccttgctatgagaaccgtcttaacagactgaattgtcag
gcccagtctgttccctccaggactgtacgtctgttttccacccagacaaaatgcgaggac
agttcttcgcttagaggtccacctgtcacaccacaggcttggtctggattggccagtttc
cgcgtcatgggttctttcaaaaaactgcggacttctgtgctccaaggaatccagaaccgg
aacaatgcgatggcagccggtcaggagagaaacatgtccttgatgcttgaggacggtggt
agtttcttagtaaccaaacgagaggtcgcgaccaatcaaacaaaggaaattgacaaagtg
tcaatgacgaatgggacgtctcaaactgggaagatgtcttcggtttcagatgaggaagac
tgtgaggaggaagagggtgggtttcagaggaattcccacttttctcggagtattcgcaaa
gcttatggggcaggacggatctcattgcttgacatagtcaagacagatagcccgtctacc
agtgagccttcccccagcagcactgtggaatctgttgtaccttgtaagaaccttgagact
caagaaaatgttctcaaaagactaagcaaaagtgcagataatcttcatgtcttcaagagc
cattttagacgcaaagccacctcaactgagccacagaacccagaaggcacccatactata
attcttcagaggaccaccagttcctcatcggttgacttacaggaacgtgattcagttagg
cgtcaaagccccatgaggacacgaggacatttgcaaaagcttgtcggtagtttaacagac
ctgacagtgaagcgtaaaaacacatcagacccccctcccagagtaccgctgtcacctctc
agtcagctacacgatgactactcccgcagaacttcctgtgtatccatgagtggccgtcaa
cggaggcctttacccactcctagcaaagcccagcaggccaacactcatgaacatatccca
actttacactctgctccctcctgccccgccgtctttagctccaccctagatgaatctctc
gagcctcctagcaaaacaacagccctcataagcgactctgtccaagtgactatgtcctca
acagacttctgttcagatgccccagtctgtccactggaaaaatactgtgaacctatggag
tgccatcaaaatggaataaatgaccactactctcaaatgcccaagcagtgctcaagcccc
agtcaaaagcagacagtcaatggcattaacgctaacttggagtgtctatggactgaagag
aaggaaactgaagatcttgagacttcatcagatgacctagtcagaaatgcatttctcaaa
agtgatgagatctcagcctctgctgcttcatctgtcacaaacacctgttcctcagaatcc
cccttgataactccaacaacaccaaactctccagccttttccagtgattctcccttttct
gtagtgcccaggaagagggcaggtcgctccagaccccgtccagtgtctgactatggccag
ctggccagcacaaagtactgcatcccagaggaggacagggagtcagagaatatggactac
acttcccaaaaggactacaatagcagtggcagctacatagagagcaacagacctgagaat
ggtcatgtgtgcactcaaacagaaagcagaaagagacgtcccatctccgttattggagga
gtggatctgtattcatccccaactgctgagcagaaggacgacactgaaagtttgccttct
ccggtttctcgtcctccagtgccctctcacagagtgcctccataccgggcagtgtctgtc
cgtctgagaccctgcatcttctcccaaagcacacctatcggtctggataggatggggcgg
cgcagagggcgcagagtgctcagtgatggcagctctgatccaatgcttgatgacagtgtg
agtgaggaggacggcagctttgaagaactgactgaaggaactccatatctccaaccggaa
gttgatcttttcactctcaatcagtacatacactctggccatgccgtgtatgcggaggct
ctgtgggatcatgtcacaatggaagagcaggagctggccttcaaagccggggaggtgatc
cgggttctggatgttcaggagcaggactggtggtgggggatggtgggggaccgcgaggcc
tggtttccttccagctttgtgcgggttcgagtgaatcagggggattcgagcagtgacagc
gtggagagcgttccagatgcggaagagtccgtcccatcagatgcacacaaacaaaactca
gagcacagggagcagatgagagccaatgtggtcaaagagatcatggacacagagcgcgtt
tacataaaacatctcaaagatatctgtgagggatatatccgtcaatgcagaaagcaccct
ggtatgtttactgatgcgcagctaaagacgatcttcagtaacatcgaggacatctacagg
ttccagaggaagtttctcaaggacctagaaaagaaatacaacagtgaaaaccctcatcta
agtgagattggctcctgcttccttcaacaggaggaaggtttctccatatactctgagtac
tgtaacacgcatccagtggcatgtgctgaattacagcgattgatgaaacaagggagatat
aaacacttctttgaagcctgtcgtctcctacagcagatgatcgacatctccatttctggc
ttcttactcacacctgtacagaagatttgtaaatatcctcttcagcttggggagcttttg
aaatacacacccaaagaccacagtgactacgcaggggtgtgtgccgcacataaagcaatg
aagaatgtggcaagtctgataaacgagaggaaaaggcgacttgagagcatcgacaccatc
gctcactggcaggtggccatcctccactgggcgggtgatgatgtgttaacacgaagctcc
gagctcatccactccggcgagcttacgcggatagtacgacccggtaagacgcagcaacgc
agctacttcctgtttgaccaccagctggtgttctgtaagaaagacgtcctgcggcgagac
ctgctacactaccgtggccgtatggacacagaccagctcgagccaatcgacctgcctgat
ggacggcacactgagctgggcctactgaagaacgcgtttctcctacggcatgcagagaac
ctgaacgtgctgtgtgtgctgtgctgcaaaaagagccaggacaaggagagatggctgcaa
gcgtttgctcgagagcgcagacgggtacaggaagaccaagagatggggatggagattact
gaggcccagaggaagcaagcagttcacaacgccaggaaatctaaaaaaggcaaaatgaaa
aaaatgaactactctggtcatcctgtgcctccccaccatcagcccctacatcctctccat
cagcgacatgtgaccgtgccaaccagcatcccgcagcagcaggtcttctctttagcagag
ccaaagaagaaaccagctcacctgttgtactcacttgcacgcagtgccctcttcaggaaa
tga
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